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The map label for this gene is 108800972

Identifier: 108800972

GI number: 108800972

Start: 4273017

End: 4273583

Strand: Reverse

Name: 108800972

Synonym: Mmcs_4008

Alternate gene names: NA

Gene position: 4273583-4273017 (Counterclockwise)

Preceding gene: 108800975

Following gene: 108800971

Centisome position: 74.9

GC content: 67.9

Gene sequence:

>567_bases
GTGCGTGTGCCCGATCGACCCGACCGCCCGTGGGCGGTCTGTGTGTACTGCGCCTCCAGCCCGACCGACGAGAGGTTGCT
GAGCCTGGCCGCCCGCGTCGGAGAGGCGATCGCCGACCGCGGCTGGACGCTGGTTTCCGGCGGCGGGAACGTTTCCGCGA
TGGGCGCCCTCGCCCACGCCGCCAGGGCGCACGGCGGCCGGACGGTCGGGGTGATCCCCAAGGCGCTGGTGCACCGGGAG
GTCGCCGACGTCGACGCCGACGAGCTCGTCGTCACCGACACCATGCGTGAGCGCAAACAGGTGATGGAGGACCGCGCCGA
CGCGTTTCTGTCATTACCCGGGGGCATCGGCACACTCGAGGAATTTTTCGAAGCCTGGACTGCCGCGTATTTGGGTATGC
ATGACAAGCCGGTGGTGATGCTCGATCCGATCGGTCACTACGAGGGTCTGCTGGCCTGGTTGCACGGTTTGGTCGACAGC
GGTTACGTCGCCCGCAGTGCGCTGGACCGGTTGATCGTCGTCGACAACATCGACGAGGCGATGGCAGCGTGCGCCCCTCG
CCTCTGA

Upstream 100 bases:

>100_bases
GAGCGCGTGCGGACGCCCGCCTCGATGGATTCCAGTGCCGGTTCGTGCGGCGCCACAACCCAGTCGACAGGCACCGCCGG
ATTGTAGGACCGTCTAGGTT

Downstream 100 bases:

>100_bases
GTGAGCGTGGTTAGGTGGTGCGCACGCACGACGATCGGAGGGGTTGCACCACATGAGCGACGAGAAATCGGGGACTCGTA
GCAGCGTCGGTTTGCTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRVPDRPDRPWAVCVYCASSPTDERLLSLAARVGEAIADRGWTLVSGGGNVSAMGALAHAARAHGGRTVGVIPKALVHRE
VADVDADELVVTDTMRERKQVMEDRADAFLSLPGGIGTLEEFFEAWTAAYLGMHDKPVVMLDPIGHYEGLLAWLHGLVDS
GYVARSALDRLIVVDNIDEAMAACAPRL

Sequences:

>Translated_188_residues
MRVPDRPDRPWAVCVYCASSPTDERLLSLAARVGEAIADRGWTLVSGGGNVSAMGALAHAARAHGGRTVGVIPKALVHRE
VADVDADELVVTDTMRERKQVMEDRADAFLSLPGGIGTLEEFFEAWTAAYLGMHDKPVVMLDPIGHYEGLLAWLHGLVDS
GYVARSALDRLIVVDNIDEAMAACAPRL
>Mature_188_residues
MRVPDRPDRPWAVCVYCASSPTDERLLSLAARVGEAIADRGWTLVSGGGNVSAMGALAHAARAHGGRTVGVIPKALVHRE
VADVDADELVVTDTMRERKQVMEDRADAFLSLPGGIGTLEEFFEAWTAAYLGMHDKPVVMLDPIGHYEGLLAWLHGLVDS
GYVARSALDRLIVVDNIDEAMAACAPRL

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=203, Percent_Identity=32.0197044334975, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20232; Mature: 20232

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPDRPDRPWAVCVYCASSPTDERLLSLAARVGEAIADRGWTLVSGGGNVSAMGALAHA
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
ARAHGGRTVGVIPKALVHREVADVDADELVVTDTMRERKQVMEDRADAFLSLPGGIGTLE
HHHCCCCEEHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCHHH
EFFEAWTAAYLGMHDKPVVMLDPIGHYEGLLAWLHGLVDSGYVARSALDRLIVVDNIDEA
HHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCHHHH
MAACAPRL
HHHHCCCC
>Mature Secondary Structure
MRVPDRPDRPWAVCVYCASSPTDERLLSLAARVGEAIADRGWTLVSGGGNVSAMGALAHA
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
ARAHGGRTVGVIPKALVHREVADVDADELVVTDTMRERKQVMEDRADAFLSLPGGIGTLE
HHHCCCCEEHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCHHH
EFFEAWTAAYLGMHDKPVVMLDPIGHYEGLLAWLHGLVDSGYVARSALDRLIVVDNIDEA
HHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCHHHH
MAACAPRL
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]