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The map label for this gene is 108800921

Identifier: 108800921

GI number: 108800921

Start: 4216109

End: 4216930

Strand: Reverse

Name: 108800921

Synonym: Mmcs_3957

Alternate gene names: NA

Gene position: 4216930-4216109 (Counterclockwise)

Preceding gene: 108800923

Following gene: 108800920

Centisome position: 73.91

GC content: 73.84

Gene sequence:

>822_bases
GTGCAATCACCTCACCCGCGCACCGGCGTCCCCTTCTCTTCACCCGTGCCGCCGGGCACCGGGTGGCCGGGTGACCCGGC
CACCCCCGCCACGGCGGTCGCCGCCTCCGCCGCTGCGGTCGAGTCGCTGGCGGCCGCGGTCGGGTCACTCGACGAACTGG
ACGCGCTCGTGTCGGTGTGCCGAGCGTGCCCGCGCCTGGTCGAGTGGCGGGAGGAGGCTGCGACCGTCAAACGCAAGTCG
TTCGTCGATCAGCCGTACTGGGGCCGGCCCGCACCCGGGTGGGGTGACACCCATCCGCGCATCATGGTCGTCGGCCTGGC
CCCGGCCGCCCACGGCGCCAACCGGACCGGGCGGGTGTTCACCGGCGACCGCTCCGGCGATTTTCTGTTCGCCGCACTGC
ACCGCGCCGGCCTGGCCAACCAGTCGCTGTGCGTGGACGCCGCAGACGGGTTGTCGCTCAACGACGTTCGCGTCGCGGCC
GCGGTCCGGTGCGCACCCCCGGCGAACGCGCCGACGCCGGCCGAACGGGCGACGTGCGCACCGTGGCTGGACGCGGAGTG
GCGCCTGGTCAGCGGGGACGTGCGGGTGGTGATCGCCCTCGGCGGGTTCGCGTGGAAGGCGGCACTGCACATGCTGCGCC
GCGGCGGGGCGTCCGTGCCGGTCCCCGCGCCGCAGTTCGGGCACCTCGCCGAGGCCGCGATCGACGGCGTCACGCTGATG
GGCTGCTATCACCCCAGTCAGCAGAACACGTTCACCGGGAAGTTGACCCCGGCGATGATGGACGCCGTCTTCATCCGGGC
CCGTGAGCTGGCGGGACGCTAG

Upstream 100 bases:

>100_bases
GGCGGTCAAGGCCGAGAAGTAGATGAGGTACAGCGGGACGCGCTTGCTGGCGATCATGGGTATCGCGGCCGAATGTAGCA
GCGGGCGGCACAGTGGAGGC

Downstream 100 bases:

>100_bases
ACCGGGAACGTAGCCGGGCCGGAATGCGTTGACGTTGCCATGCGTCTTTCTGTCCTGGACCTCATCCCCGTGCGCACCGA
CCAGACCACGTCGGATGCGC

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MQSPHPRTGVPFSSPVPPGTGWPGDPATPATAVAASAAAVESLAAAVGSLDELDALVSVCRACPRLVEWREEAATVKRKS
FVDQPYWGRPAPGWGDTHPRIMVVGLAPAAHGANRTGRVFTGDRSGDFLFAALHRAGLANQSLCVDAADGLSLNDVRVAA
AVRCAPPANAPTPAERATCAPWLDAEWRLVSGDVRVVIALGGFAWKAALHMLRRGGASVPVPAPQFGHLAEAAIDGVTLM
GCYHPSQQNTFTGKLTPAMMDAVFIRARELAGR

Sequences:

>Translated_273_residues
MQSPHPRTGVPFSSPVPPGTGWPGDPATPATAVAASAAAVESLAAAVGSLDELDALVSVCRACPRLVEWREEAATVKRKS
FVDQPYWGRPAPGWGDTHPRIMVVGLAPAAHGANRTGRVFTGDRSGDFLFAALHRAGLANQSLCVDAADGLSLNDVRVAA
AVRCAPPANAPTPAERATCAPWLDAEWRLVSGDVRVVIALGGFAWKAALHMLRRGGASVPVPAPQFGHLAEAAIDGVTLM
GCYHPSQQNTFTGKLTPAMMDAVFIRARELAGR
>Mature_273_residues
MQSPHPRTGVPFSSPVPPGTGWPGDPATPATAVAASAAAVESLAAAVGSLDELDALVSVCRACPRLVEWREEAATVKRKS
FVDQPYWGRPAPGWGDTHPRIMVVGLAPAAHGANRTGRVFTGDRSGDFLFAALHRAGLANQSLCVDAADGLSLNDVRVAA
AVRCAPPANAPTPAERATCAPWLDAEWRLVSGDVRVVIALGGFAWKAALHMLRRGGASVPVPAPQFGHLAEAAIDGVTLM
GCYHPSQQNTFTGKLTPAMMDAVFIRARELAGR

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1105 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 28523; Mature: 28523

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPHPRTGVPFSSPVPPGTGWPGDPATPATAVAASAAAVESLAAAVGSLDELDALVSVC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RACPRLVEWREEAATVKRKSFVDQPYWGRPAPGWGDTHPRIMVVGLAPAAHGANRTGRVF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE
TGDRSGDFLFAALHRAGLANQSLCVDAADGLSLNDVRVAAAVRCAPPANAPTPAERATCA
ECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
PWLDAEWRLVSGDVRVVIALGGFAWKAALHMLRRGGASVPVPAPQFGHLAEAAIDGVTLM
CCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEE
GCYHPSQQNTFTGKLTPAMMDAVFIRARELAGR
EEECCCCCCEEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSPHPRTGVPFSSPVPPGTGWPGDPATPATAVAASAAAVESLAAAVGSLDELDALVSVC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RACPRLVEWREEAATVKRKSFVDQPYWGRPAPGWGDTHPRIMVVGLAPAAHGANRTGRVF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE
TGDRSGDFLFAALHRAGLANQSLCVDAADGLSLNDVRVAAAVRCAPPANAPTPAERATCA
ECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
PWLDAEWRLVSGDVRVVIALGGFAWKAALHMLRRGGASVPVPAPQFGHLAEAAIDGVTLM
CCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEE
GCYHPSQQNTFTGKLTPAMMDAVFIRARELAGR
EEECCCCCCEEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]