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The map label for this gene is 108800923

Identifier: 108800923

GI number: 108800923

Start: 4218205

End: 4218852

Strand: Reverse

Name: 108800923

Synonym: Mmcs_3959

Alternate gene names: NA

Gene position: 4218852-4218205 (Counterclockwise)

Preceding gene: 108800928

Following gene: 108800921

Centisome position: 73.94

GC content: 70.22

Gene sequence:

>648_bases
ATGTCCCGCTCCTACGGCCAACACTGCGCGCTGGCCAAGAGTCTCGACCTGGTCGGTGACCGGTGGACGCTGTTGATCGT
GCGCGAGTTGCTCGACCGGCCACGGCGTTACGGGGACCTGCTGAACAGCCTCACGCCGATCGCCACCGACATGCTCGCCG
GGCGGCTGCGCGATCTCGAGCGCAACGGGCTGGTGGTCAAACGCGAACTCCCCAAACCGGGGTCGGGAAACGTCTACGAC
CTCACCGACGACGGACGCGCGCTCGAGGACGTCATCAACGCGTTCGTGCGGTGGGGCAGGCATCTGCTGTTCACGCGGAC
CCCGACGGATCTGGTGCGCCCCGAATGGCTGGCGCGCGCGGTGCGCGCCTATGTGCGTGACGACCGGACCGGACCCGATC
TGGTGCTGCGCCTGGCGACGCCGCAGGGCGGGGCGACCATCCTGATCGGCACCCGGCGGGTGGAGTTGGTCGGCGATGAG
GTCGCCCCGGATGTGGTGCTGACCGGTGAGGTGGATGTGCTGGCCGCCGCCACCGACCCCGCCCGCGTCGACGAACTGGT
CGCGGCGGGCAGGTTGCACGTCGCCGGCGCCCCCGAAGCGGTTCGACAACTCGCCGAGGTGTTCACCCCGCCCCGGGTTC
GCCTCTGA

Upstream 100 bases:

>100_bases
GGCGACCAGCGGTGCTGCGGCCATGGGTTCACGGTAGGAGTATCGCTTGGAAAAAACAAGTATGCGTTGAGGGAAGGCTG
ACCTGCACTAGTTTCGACGC

Downstream 100 bases:

>100_bases
GGGGTCGGGCCGGTTCCCGGTCGAGTTCGCGCAGGGCGGGCAGGAAGACGGCCGCCACACCGAGGGCGAGCATCGGCAGT
GCGAGCGCGAGGAACGTCAC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator HxlR Family; Transcriptional Regulator Protein; MarR Family Transcriptional Regulator; Transcriptional Regulator Family; HxlR-Like Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator Protein; HxlR-Like Helix-Turn-Helix Family; StgU Protein

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSRSYGQHCALAKSLDLVGDRWTLLIVRELLDRPRRYGDLLNSLTPIATDMLAGRLRDLERNGLVVKRELPKPGSGNVYD
LTDDGRALEDVINAFVRWGRHLLFTRTPTDLVRPEWLARAVRAYVRDDRTGPDLVLRLATPQGGATILIGTRRVELVGDE
VAPDVVLTGEVDVLAAATDPARVDELVAAGRLHVAGAPEAVRQLAEVFTPPRVRL

Sequences:

>Translated_215_residues
MSRSYGQHCALAKSLDLVGDRWTLLIVRELLDRPRRYGDLLNSLTPIATDMLAGRLRDLERNGLVVKRELPKPGSGNVYD
LTDDGRALEDVINAFVRWGRHLLFTRTPTDLVRPEWLARAVRAYVRDDRTGPDLVLRLATPQGGATILIGTRRVELVGDE
VAPDVVLTGEVDVLAAATDPARVDELVAAGRLHVAGAPEAVRQLAEVFTPPRVRL
>Mature_214_residues
SRSYGQHCALAKSLDLVGDRWTLLIVRELLDRPRRYGDLLNSLTPIATDMLAGRLRDLERNGLVVKRELPKPGSGNVYDL
TDDGRALEDVINAFVRWGRHLLFTRTPTDLVRPEWLARAVRAYVRDDRTGPDLVLRLATPQGGATILIGTRRVELVGDEV
APDVVLTGEVDVLAAATDPARVDELVAAGRLHVAGAPEAVRQLAEVFTPPRVRL

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23711; Mature: 23579

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSYGQHCALAKSLDLVGDRWTLLIVRELLDRPRRYGDLLNSLTPIATDMLAGRLRDLE
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGLVVKRELPKPGSGNVYDLTDDGRALEDVINAFVRWGRHLLFTRTPTDLVRPEWLARA
CCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCHHHHHHH
VRAYVRDDRTGPDLVLRLATPQGGATILIGTRRVELVGDEVAPDVVLTGEVDVLAAATDP
HHHHHHCCCCCCCEEEEEECCCCCEEEEEECEEEEEECCCCCCCEEEECCCEEEEECCCH
ARVDELVAAGRLHVAGAPEAVRQLAEVFTPPRVRL
HHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SRSYGQHCALAKSLDLVGDRWTLLIVRELLDRPRRYGDLLNSLTPIATDMLAGRLRDLE
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGLVVKRELPKPGSGNVYDLTDDGRALEDVINAFVRWGRHLLFTRTPTDLVRPEWLARA
CCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCHHHHHHH
VRAYVRDDRTGPDLVLRLATPQGGATILIGTRRVELVGDEVAPDVVLTGEVDVLAAATDP
HHHHHHCCCCCCCEEEEEECCCCCEEEEEECEEEEEECCCCCCCEEEECCCEEEEECCCH
ARVDELVAAGRLHVAGAPEAVRQLAEVFTPPRVRL
HHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA