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The map label for this gene is yfhP [C]

Identifier: 108800879

GI number: 108800879

Start: 4169398

End: 4169886

Strand: Reverse

Name: yfhP [C]

Synonym: Mmcs_3915

Alternate gene names: 108800879

Gene position: 4169886-4169398 (Counterclockwise)

Preceding gene: 108800880

Following gene: 108800878

Centisome position: 73.09

GC content: 70.76

Gene sequence:

>489_bases
ATGCGGATGTCGGCCAAGGCGGAGTATGCCGTCCGGGCCATGGTGCAGCTGGCCACCGCCGACGACGGTGTGCTGGTCAA
AACCGACGACCTCGCGAAAGCCCAGGGGATTCCGGCGCAGTTCCTCGTCGACATCCTCTCCGATCTGCGCACCGACCGGC
TGGTGCGCAGCCAGCGCGGCCGCGACGGCGGTTACGAACTCGCCCGGCCGGCCGCCGACATCAGCATCGCCGACGTCCTG
CGCTGCATCGACGGCCCGCTGGCCAGCGTGCGCGACATCGGCCTCGGCGACCTGCCGTACTCCGGCCCGACCGCGGCGCT
GACCGATGTGTGGCGCGCGCTGCGGGCCAGCATGCGTTCGGTGCTCGAACAGACCAGCCTCGCCGACGTGGCGTCCGGTG
CGCTGCCTGCGCACGTGGCGTCGATGGCCGGTGACTACCTCGACCAGGAGCGCAAACGCGGCCACCACCACCGCGTGGAC
TCGAAATAG

Upstream 100 bases:

>100_bases
GCCCGCCGCTGCCATGCAGGCAGCCAGTCTGGCCGGAATGGCCGACCTGTTCGCGGTGGTGGTGCCCAGTTCGCAGGACA
TCCCGGACTAGCCTCAGATC

Downstream 100 bases:

>100_bases
TCTGCACCTGAGCTCATTCGCGGCATCAGTATCGTCGTGGCAGTGGATTCCGAACGATCTGACGGACCGCCCCGGCGTCG
GCGCGCACTGAATCTCGCGC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRMSAKAEYAVRAMVQLATADDGVLVKTDDLAKAQGIPAQFLVDILSDLRTDRLVRSQRGRDGGYELARPAADISIADVL
RCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRSVLEQTSLADVASGALPAHVASMAGDYLDQERKRGHHHRVD
SK

Sequences:

>Translated_162_residues
MRMSAKAEYAVRAMVQLATADDGVLVKTDDLAKAQGIPAQFLVDILSDLRTDRLVRSQRGRDGGYELARPAADISIADVL
RCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRSVLEQTSLADVASGALPAHVASMAGDYLDQERKRGHHHRVD
SK
>Mature_162_residues
MRMSAKAEYAVRAMVQLATADDGVLVKTDDLAKAQGIPAQFLVDILSDLRTDRLVRSQRGRDGGYELARPAADISIADVL
RCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRSVLEQTSLADVASGALPAHVASMAGDYLDQERKRGHHHRVD
SK

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=91, Percent_Identity=35.1648351648352, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17438; Mature: 17438

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSAKAEYAVRAMVQLATADDGVLVKTDDLAKAQGIPAQFLVDILSDLRTDRLVRSQRG
CCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
RDGGYELARPAADISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS
CCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VLEQTSLADVASGALPAHVASMAGDYLDQERKRGHHHRVDSK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRMSAKAEYAVRAMVQLATADDGVLVKTDDLAKAQGIPAQFLVDILSDLRTDRLVRSQRG
CCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
RDGGYELARPAADISIADVLRCIDGPLASVRDIGLGDLPYSGPTAALTDVWRALRASMRS
CCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VLEQTSLADVASGALPAHVASMAGDYLDQERKRGHHHRVDSK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]