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The map label for this gene is yddQ [H]

Identifier: 108800880

GI number: 108800880

Start: 4169896

End: 4170495

Strand: Reverse

Name: yddQ [H]

Synonym: Mmcs_3916

Alternate gene names: 108800880

Gene position: 4170495-4169896 (Counterclockwise)

Preceding gene: 108800881

Following gene: 108800879

Centisome position: 73.1

GC content: 68.83

Gene sequence:

>600_bases
GTGGCGAATCCAACCCTGCGTGTCCTGGCCGATCTGCCCCAGCAGCCGGTCAACCTCTCCCAGTCCACCCTGGTGCTCAT
CGACTGCCAGAACACCTACACCCGCGGTGTGATGGAACTCGAGGGCGTCCAGGCCGCGCTGGAGGAGGCGGCGTCGCTGC
TCGAGCGGGCGCGGTCCGCCGGGATCCCGGTCATCCACATCCAGCATTCGGACGGACCGGATTCGCTCTACGACATCGAG
GGTGAGACCGGGGCGATCGTGCCCATCGTCGCCCCGCGTGAGGGTGAGCCCGTCGTGGTCAAGCAGTACCCGAACTCGTT
CGTGCAGACCGACCTCGACGACCGGCTCAAGGCCGTCGGCGCCTCGAACCTCGTGCTGGCCGGCTTCATGACCCACATGT
GTGTGAACTCCACCGCGCGCGGCGCGTTCAACCTCGGCTACGCGCCGACGGTGGTGGCCTCGGCGACCGCGACCCGCGCG
CTGCCGGGCCTCGGTAGCGACGACACTGTGCCCGCCGCTGCCATGCAGGCAGCCAGTCTGGCCGGAATGGCCGACCTGTT
CGCGGTGGTGGTGCCCAGTTCGCAGGACATCCCGGACTAG

Upstream 100 bases:

>100_bases
TCTACAACCGCGAGGACCCCAAGCTGCCCGATCTGGTGGTGTGCCGTCCGGAACTGGCCGAGGCGGTGCTGGCCGTCACC
CGCTGAGTAGGCTCGCGGAC

Downstream 100 bases:

>100_bases
CCTCAGATCATGCGGATGTCGGCCAAGGCGGAGTATGCCGTCCGGGCCATGGTGCAGCTGGCCACCGCCGACGACGGTGT
GCTGGTCAAAACCGACGACC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MANPTLRVLADLPQQPVNLSQSTLVLIDCQNTYTRGVMELEGVQAALEEAASLLERARSAGIPVIHIQHSDGPDSLYDIE
GETGAIVPIVAPREGEPVVVKQYPNSFVQTDLDDRLKAVGASNLVLAGFMTHMCVNSTARGAFNLGYAPTVVASATATRA
LPGLGSDDTVPAAAMQAASLAGMADLFAVVVPSSQDIPD

Sequences:

>Translated_199_residues
MANPTLRVLADLPQQPVNLSQSTLVLIDCQNTYTRGVMELEGVQAALEEAASLLERARSAGIPVIHIQHSDGPDSLYDIE
GETGAIVPIVAPREGEPVVVKQYPNSFVQTDLDDRLKAVGASNLVLAGFMTHMCVNSTARGAFNLGYAPTVVASATATRA
LPGLGSDDTVPAAAMQAASLAGMADLFAVVVPSSQDIPD
>Mature_198_residues
ANPTLRVLADLPQQPVNLSQSTLVLIDCQNTYTRGVMELEGVQAALEEAASLLERARSAGIPVIHIQHSDGPDSLYDIEG
ETGAIVPIVAPREGEPVVVKQYPNSFVQTDLDDRLKAVGASNLVLAGFMTHMCVNSTARGAFNLGYAPTVVASATATRAL
PGLGSDDTVPAAAMQAASLAGMADLFAVVVPSSQDIPD

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20740; Mature: 20609

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPTLRVLADLPQQPVNLSQSTLVLIDCQNTYTRGVMELEGVQAALEEAASLLERARSA
CCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIPVIHIQHSDGPDSLYDIEGETGAIVPIVAPREGEPVVVKQYPNSFVQTDLDDRLKAVG
CCCEEEEECCCCCCCEEECCCCCCCEEEEECCCCCCEEEEECCCCCHHHCCHHHHHHHCC
ASNLVLAGFMTHMCVNSTARGAFNLGYAPTVVASATATRALPGLGSDDTVPAAAMQAASL
CCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AGMADLFAVVVPSSQDIPD
HHHHHHHEEECCCCCCCCC
>Mature Secondary Structure 
ANPTLRVLADLPQQPVNLSQSTLVLIDCQNTYTRGVMELEGVQAALEEAASLLERARSA
CCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIPVIHIQHSDGPDSLYDIEGETGAIVPIVAPREGEPVVVKQYPNSFVQTDLDDRLKAVG
CCCEEEEECCCCCCCEEECCCCCCCEEEEECCCCCCEEEEECCCCCHHHCCHHHHHHHCC
ASNLVLAGFMTHMCVNSTARGAFNLGYAPTVVASATATRALPGLGSDDTVPAAAMQAASL
CCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AGMADLFAVVVPSSQDIPD
HHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]