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The map label for this gene is atpC

Identifier: 108800839

GI number: 108800839

Start: 4128171

End: 4128536

Strand: Reverse

Name: atpC

Synonym: Mmcs_3875

Alternate gene names: 108800839

Gene position: 4128536-4128171 (Counterclockwise)

Preceding gene: 108800840

Following gene: 108800838

Centisome position: 72.36

GC content: 68.85

Gene sequence:

>366_bases
ATGGCCGACCTTGACGTAGACATCGTCGCCGTCGAGCGGGAGATCTGGTCGGGTAAGGCGACATTCGTCTTCACCCGCAC
CACCTCCGGTGAGATCGGCATCCTGCCGCGGCACATCCCGCTGGTGGCTCAGCTCGTCGACGATGCGATGGTGCGCGTCG
AACGCGAGGGTGAGGAAGACCTGCGGGTCGCGGTCGGCGGTGGCTTCATGTCCGTGACCGAGTCCGGCGTGATCATCCTC
GCCGAGACCGCCGAGCTCGAATCGGAGATCAACGCCGACGAGGCGCGTCGCGACTCCGAGTCCGACGACCCGGCGACGGC
CGCCCGGGGCCGCGCGCGACTGCGCGCGCTGGGCCAGATCGACTAG

Upstream 100 bases:

>100_bases
TCGGCGCCAAGATGGAGGACACCTCCGGCGACGGCGCCCCGGCCCAGAGCGATTCCAAGAGCGACTCCAAGGGTGACGAC
GCAGACAAGGACGCCTGACG

Downstream 100 bases:

>100_bases
CGGTACCGATGAGCGCGCCCATGTGGAGCATGGTCGCGCTCATCGGCGTGCTGCTGCTTGTCGTCATCGCGCTGACCTAC
CGCCTGTGGAAGCTGCGCCA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MADLDVDIVAVEREIWSGKATFVFTRTTSGEIGILPRHIPLVAQLVDDAMVRVEREGEEDLRVAVGGGFMSVTESGVIIL
AETAELESEINADEARRDSESDDPATAARGRARLRALGQID

Sequences:

>Translated_121_residues
MADLDVDIVAVEREIWSGKATFVFTRTTSGEIGILPRHIPLVAQLVDDAMVRVEREGEEDLRVAVGGGFMSVTESGVIIL
AETAELESEINADEARRDSESDDPATAARGRARLRALGQID
>Mature_120_residues
ADLDVDIVAVEREIWSGKATFVFTRTTSGEIGILPRHIPLVAQLVDDAMVRVEREGEEDLRVAVGGGFMSVTESGVIILA
ETAELESEINADEARRDSESDDPATAARGRARLRALGQID

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_MYCSJ (A3Q3B0)

Other databases:

- EMBL:   CP000580
- RefSeq:   YP_001072128.1
- ProteinModelPortal:   A3Q3B0
- SMR:   A3Q3B0
- STRING:   A3Q3B0
- EnsemblBacteria:   EBMYCT00000052587
- GeneID:   4879571
- GenomeReviews:   CP000580_GR
- KEGG:   mjl:Mjls_3861
- eggNOG:   COG0355
- GeneTree:   EBGT00050000016019
- HOGENOM:   HBG663981
- OMA:   HEPVLGQ
- ProtClustDB:   PRK00571
- BioCyc:   MSP164757:MJLS_3861-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 13095; Mature: 12964

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLDVDIVAVEREIWSGKATFVFTRTTSGEIGILPRHIPLVAQLVDDAMVRVEREGEED
CCCCCEEEEEEEHHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCC
LRVAVGGGFMSVTESGVIILAETAELESEINADEARRDSESDDPATAARGRARLRALGQI
EEEEECCCEEEECCCCEEEEEECCHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCC
D
C
>Mature Secondary Structure 
ADLDVDIVAVEREIWSGKATFVFTRTTSGEIGILPRHIPLVAQLVDDAMVRVEREGEED
CCCCEEEEEEEHHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCC
LRVAVGGGFMSVTESGVIILAETAELESEINADEARRDSESDDPATAARGRARLRALGQI
EEEEECCCEEEECCCCEEEEEECCHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA