| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800672
Identifier: 108800672
GI number: 108800672
Start: 3960990
End: 3961520
Strand: Reverse
Name: 108800672
Synonym: Mmcs_3707
Alternate gene names: NA
Gene position: 3961520-3960990 (Counterclockwise)
Preceding gene: 108800673
Following gene: 108800671
Centisome position: 69.43
GC content: 69.49
Gene sequence:
>531_bases GTGACGCGTCTGACGCCGCTCCCGCCCGACCGCTGGGACGACGACGTCCGGCGGGCGTTGAGCCCGTTGCTCGGCGCCGA CCGGGCGAACCCACGCGATGCGGGCAACGTGCTGGCCACGCTCGTCCGGCACCAACCGCTCACCCGCGCCTATCTGGAGT TCAACGCCTACCTCCTGCGGGAGTCGACGCTGACCCCTCGGATCAGGGAGGTGGCGCTGATGCGCGCGGTGTTGTGGCGG CGGTGCGACTACCTGTGGGACCACCACGTCGTCCTCGCGCAGCGCGCCGGTCTGACGGTCGATGAGATAGCCGGCATCCG CAGCGGCGCCATGGGCGACGGGCTGGACGGGCTGGTGATCAGGGTGGTCGACGAACTCGAGTCGGACAGCACGATCTCCG ACGACACCTGGGCCGCGCTGGGCGGTCACCTCGACGACCGCCAATGCATGGACCTGGTGTTCACGATCGGCGGATACCAA TTGCTCGCGGTGGCGGTGAACGCCTTCGGCATCGAGCCCGAGGACGTGTGA
Upstream 100 bases:
>100_bases TCTGGGACAACCGCGGCGTACTGCACCGCGCGGCGCCGTATCCGGAGAACTCACCGCGGGAGATGCTGCGCACCACCGTG CTCGGCGACGAACCGATCCA
Downstream 100 bases:
>100_bases GCGACCTGTCGTTGACGCCGCATCGCCGGTGTGAAAACCTGATACGCAAAGATGAGAATCACGTTCTCGCTTCTTGGATC GAATGGAGCAGCACATGGCG
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: Alkylhydroperoxidase; Alkylhydroperoxidase Like Protein
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTRLTPLPPDRWDDDVRRALSPLLGADRANPRDAGNVLATLVRHQPLTRAYLEFNAYLLRESTLTPRIREVALMRAVLWR RCDYLWDHHVVLAQRAGLTVDEIAGIRSGAMGDGLDGLVIRVVDELESDSTISDDTWAALGGHLDDRQCMDLVFTIGGYQ LLAVAVNAFGIEPEDV
Sequences:
>Translated_176_residues MTRLTPLPPDRWDDDVRRALSPLLGADRANPRDAGNVLATLVRHQPLTRAYLEFNAYLLRESTLTPRIREVALMRAVLWR RCDYLWDHHVVLAQRAGLTVDEIAGIRSGAMGDGLDGLVIRVVDELESDSTISDDTWAALGGHLDDRQCMDLVFTIGGYQ LLAVAVNAFGIEPEDV >Mature_175_residues TRLTPLPPDRWDDDVRRALSPLLGADRANPRDAGNVLATLVRHQPLTRAYLEFNAYLLRESTLTPRIREVALMRAVLWRR CDYLWDHHVVLAQRAGLTVDEIAGIRSGAMGDGLDGLVIRVVDELESDSTISDDTWAALGGHLDDRQCMDLVFTIGGYQL LAVAVNAFGIEPEDV
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19577; Mature: 19445
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLTPLPPDRWDDDVRRALSPLLGADRANPRDAGNVLATLVRHQPLTRAYLEFNAYLLR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH ESTLTPRIREVALMRAVLWRRCDYLWDHHVVLAQRAGLTVDEIAGIRSGAMGDGLDGLVI CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHH RVVDELESDSTISDDTWAALGGHLDDRQCMDLVFTIGGYQLLAVAVNAFGIEPEDV HHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRLTPLPPDRWDDDVRRALSPLLGADRANPRDAGNVLATLVRHQPLTRAYLEFNAYLLR CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH ESTLTPRIREVALMRAVLWRRCDYLWDHHVVLAQRAGLTVDEIAGIRSGAMGDGLDGLVI CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHH RVVDELESDSTISDDTWAALGGHLDDRQCMDLVFTIGGYQLLAVAVNAFGIEPEDV HHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA