| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yjgR [H]
Identifier: 108800605
GI number: 108800605
Start: 3884504
End: 3886072
Strand: Reverse
Name: yjgR [H]
Synonym: Mmcs_3639
Alternate gene names: 108800605
Gene position: 3886072-3884504 (Counterclockwise)
Preceding gene: 108800607
Following gene: 108800603
Centisome position: 68.11
GC content: 69.47
Gene sequence:
>1569_bases ATGACCAGTGAGTCGACTGACGGCCGCGCCGCCGGGATCGCCGCGGGCTACGCCACCGAAGGCCAGGCGCTGGAGTTGGG CACCGTCGTCGTCGACGGCGTGGCCGATCCGGCCGCCCGGGTGCGGATCCCGCTGGCGACCGTGAACCGTCACGGCCTGG TCGCCGGCGCGACCGGCACCGGCAAGACGAAGTCGCTGCAGGTGCTCGCCGAACAGTTGTCGGCCGCGGGCGTGCCGGTG CTGATGGCCGATGTGAAAGGCGATCTGTCCGGGCTGGCCCGGCCCGGTGAACCCGGTGAGAAGGTCTCCGAACGGGCCGC CGACACCGGCGACGCCTGGACTCCGACGGCGTACCCGGTCGAGTTCCTGACCCTTGGAACCGGCGGTGTCGGGGTGCCGG TGCGCGCCACGGTGTCCAGCTTCGGCCCGATCCTGCTGTCGAAGGTGTTGGGGCTCAATCAGACTCAGGAGTCGACGCTC GGTTTGATCTTCCACTGGGCCGACCAGAAGGGGTTGCCGCTGCTCGATCTGAAGGATCTGCGGTCGGTGATCCACTTCCT CACCAGCGAAGAGGGGAAACCCGAACTCAAGGCGCTCGGGGCTGTGTCCTCGACGACGGCCGGGGTGATTTTGCGCACGC TGATCAACCTCGAGGCCGAGGGGGCGGACACCTTCTTCGGCGAACCCGAGTTCGAACCCGACGATCTGCTGCGCCTCCAC GCTGACGGCCGCGGCGTCGCCACGTTGCTCGAACTGGGCAGCCAGGCCGCCCGCCCGGTGCTGTTCTCCACCTTCCTCAT GTGGGTGCTGGCCGATCTGTTCACGACGCTGCCGGAGGTCGGTGACCTCGACAAGCCGAAGCTCGTGTTCTTCTTCGACG AGGCGCACCTGCTGTTCGCGGACGCGTCGAAGGCGTTCCTCGAACAGGTCGAACAGACCGTCAAGCTGATCCGGTCCAAG GGTGTCGGCGTGTTCTTCTGCACGCAACTGCCGACCGACGTACCCAACGGCGTGCTGTCACAACTCGGCGCGCGGGTGCA GCACGCGTTGCGCGCGTTCACCCCGGACGACGAGAAGGCGCTGCGCAAGACCGTCCGCACCTACCCGAAAACCGACGTCT ACGACCTGCAGTCGGCGCTGTCGACGCTGGGTATCGGCGAGGCGATCGTCACGGTGCTCTCCGAGCAGGGCGTCCCGACG CCGGTGGCGTGGACGCGGATGCGGGCCCCGCGCTCTCTGATGGACACCATCGGCGCCGAGGCGATCACGGCCGCCGCCAC GGCCAGCCCGCTGCAGGCCGAGTACGGCCAGACCGTCGACCGTGAATCCGCCTATGAGCGGCTGGCCGCCCGGTTGGCGC CGCCGCCGGTCGCGCCGCCCGCGGACCTGCCGCCGGTTCCGCCGCCGTACGATATTCCGCCCATGCCCGCGCCCGCGCCG GAGCCGGGTCTGTTCGACAAGGTGATGGACAGCCCGGCCTTCAAGAGCGCGATGCGGTCAGCGGGCACCGTCATCGGCCG CGAGATCACCCGCAGCATCTTCGGCACCGGGCGCCGGCGCCGCCGTTAG
Upstream 100 bases:
>100_bases CACACCAGTTCGTCACGCACAGCGAATCAGGGTATTCGCCCCCGCCGCGGATGTGCGCCGACACCCGTCACTGCGGACCG TCCCCAGTAGGGTCAGCGCC
Downstream 100 bases:
>100_bases TCGTGACACCCTCGCCGACATCAGACTTGCGACACGCCGGGGCGCCCATATGCGTACCGGAACCTTATTCCGGCGCTGGC AGGCGGGTAGACGAGTAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MTSESTDGRAAGIAAGYATEGQALELGTVVVDGVADPAARVRIPLATVNRHGLVAGATGTGKTKSLQVLAEQLSAAGVPV LMADVKGDLSGLARPGEPGEKVSERAADTGDAWTPTAYPVEFLTLGTGGVGVPVRATVSSFGPILLSKVLGLNQTQESTL GLIFHWADQKGLPLLDLKDLRSVIHFLTSEEGKPELKALGAVSSTTAGVILRTLINLEAEGADTFFGEPEFEPDDLLRLH ADGRGVATLLELGSQAARPVLFSTFLMWVLADLFTTLPEVGDLDKPKLVFFFDEAHLLFADASKAFLEQVEQTVKLIRSK GVGVFFCTQLPTDVPNGVLSQLGARVQHALRAFTPDDEKALRKTVRTYPKTDVYDLQSALSTLGIGEAIVTVLSEQGVPT PVAWTRMRAPRSLMDTIGAEAITAAATASPLQAEYGQTVDRESAYERLAARLAPPPVAPPADLPPVPPPYDIPPMPAPAP EPGLFDKVMDSPAFKSAMRSAGTVIGREITRSIFGTGRRRRR
Sequences:
>Translated_522_residues MTSESTDGRAAGIAAGYATEGQALELGTVVVDGVADPAARVRIPLATVNRHGLVAGATGTGKTKSLQVLAEQLSAAGVPV LMADVKGDLSGLARPGEPGEKVSERAADTGDAWTPTAYPVEFLTLGTGGVGVPVRATVSSFGPILLSKVLGLNQTQESTL GLIFHWADQKGLPLLDLKDLRSVIHFLTSEEGKPELKALGAVSSTTAGVILRTLINLEAEGADTFFGEPEFEPDDLLRLH ADGRGVATLLELGSQAARPVLFSTFLMWVLADLFTTLPEVGDLDKPKLVFFFDEAHLLFADASKAFLEQVEQTVKLIRSK GVGVFFCTQLPTDVPNGVLSQLGARVQHALRAFTPDDEKALRKTVRTYPKTDVYDLQSALSTLGIGEAIVTVLSEQGVPT PVAWTRMRAPRSLMDTIGAEAITAAATASPLQAEYGQTVDRESAYERLAARLAPPPVAPPADLPPVPPPYDIPPMPAPAP EPGLFDKVMDSPAFKSAMRSAGTVIGREITRSIFGTGRRRRR >Mature_521_residues TSESTDGRAAGIAAGYATEGQALELGTVVVDGVADPAARVRIPLATVNRHGLVAGATGTGKTKSLQVLAEQLSAAGVPVL MADVKGDLSGLARPGEPGEKVSERAADTGDAWTPTAYPVEFLTLGTGGVGVPVRATVSSFGPILLSKVLGLNQTQESTLG LIFHWADQKGLPLLDLKDLRSVIHFLTSEEGKPELKALGAVSSTTAGVILRTLINLEAEGADTFFGEPEFEPDDLLRLHA DGRGVATLLELGSQAARPVLFSTFLMWVLADLFTTLPEVGDLDKPKLVFFFDEAHLLFADASKAFLEQVEQTVKLIRSKG VGVFFCTQLPTDVPNGVLSQLGARVQHALRAFTPDDEKALRKTVRTYPKTDVYDLQSALSTLGIGEAIVTVLSEQGVPTP VAWTRMRAPRSLMDTIGAEAITAAATASPLQAEYGQTVDRESAYERLAARLAPPPVAPPADLPPVPPPYDIPPMPAPAPE PGLFDKVMDSPAFKSAMRSAGTVIGREITRSIFGTGRRRRR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=482, Percent_Identity=44.3983402489627, Blast_Score=350, Evalue=2e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 55300; Mature: 55169
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSESTDGRAAGIAAGYATEGQALELGTVVVDGVADPAARVRIPLATVNRHGLVAGATGT CCCCCCCCCHHCEECCCCCCCCEEEECCEEECCCCCCCHHEEEEEEECCCCCEEEECCCC GKTKSLQVLAEQLSAAGVPVLMADVKGDLSGLARPGEPGEKVSERAADTGDAWTPTAYPV CCHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCE EFLTLGTGGVGVPVRATVSSFGPILLSKVLGLNQTQESTLGLIFHWADQKGLPLLDLKDL EEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHH RSVIHFLTSEEGKPELKALGAVSSTTAGVILRTLINLEAEGADTFFGEPEFEPDDLLRLH HHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEE ADGRGVATLLELGSQAARPVLFSTFLMWVLADLFTTLPEVGDLDKPKLVFFFDEAHLLFA CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEE DASKAFLEQVEQTVKLIRSKGVGVFFCTQLPTDVPNGVLSQLGARVQHALRAFTPDDEKA HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH LRKTVRTYPKTDVYDLQSALSTLGIGEAIVTVLSEQGVPTPVAWTRMRAPRSLMDTIGAE HHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHCHH AITAAATASPLQAEYGQTVDRESAYERLAARLAPPPVAPPADLPPVPPPYDIPPMPAPAP HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPGLFDKVMDSPAFKSAMRSAGTVIGREITRSIFGTGRRRRR CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure TSESTDGRAAGIAAGYATEGQALELGTVVVDGVADPAARVRIPLATVNRHGLVAGATGT CCCCCCCCHHCEECCCCCCCCEEEECCEEECCCCCCCHHEEEEEEECCCCCEEEECCCC GKTKSLQVLAEQLSAAGVPVLMADVKGDLSGLARPGEPGEKVSERAADTGDAWTPTAYPV CCHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCE EFLTLGTGGVGVPVRATVSSFGPILLSKVLGLNQTQESTLGLIFHWADQKGLPLLDLKDL EEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHH RSVIHFLTSEEGKPELKALGAVSSTTAGVILRTLINLEAEGADTFFGEPEFEPDDLLRLH HHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEE ADGRGVATLLELGSQAARPVLFSTFLMWVLADLFTTLPEVGDLDKPKLVFFFDEAHLLFA CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEE DASKAFLEQVEQTVKLIRSKGVGVFFCTQLPTDVPNGVLSQLGARVQHALRAFTPDDEKA HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH LRKTVRTYPKTDVYDLQSALSTLGIGEAIVTVLSEQGVPTPVAWTRMRAPRSLMDTIGAE HHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHCHH AITAAATASPLQAEYGQTVDRESAYERLAARLAPPPVAPPADLPPVPPPYDIPPMPAPAP HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPGLFDKVMDSPAFKSAMRSAGTVIGREITRSIFGTGRRRRR CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]