| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yxiO [H]
Identifier: 108800603
GI number: 108800603
Start: 3882158
End: 3883522
Strand: Reverse
Name: yxiO [H]
Synonym: Mmcs_3637
Alternate gene names: 108800603
Gene position: 3883522-3882158 (Counterclockwise)
Preceding gene: 108800605
Following gene: 108800601
Centisome position: 68.07
GC content: 70.62
Gene sequence:
>1365_bases GTGACCCAACACGCGCCGAAACCCCCGCCCTCGGCGCCGACCGCCGGCCGAGCCCGCATCGTCGCGTGGGCCCTGTGGGA CTGCGGGAACACCGGGATGAACGCGATCGTCGCGACGTTCGTGTTCGCGGTGTACCTCACCGGCGCGGTGGGTTCGGATC TTCCCGGCGACACCTCGGCCACCAGTTGGCTGGGCCGCGCGATGACCGTGGCCGGTCTGGTGGTGGCGGTGCTGGCCCCG GTGACCGGGGTGTGGGTGCAGGCCCCGCGCCGGCGACGGGTGGTGCTGACCGTGCTGACCGGCACCGCGGTCCTGCTCAC CGCGTCGATGAGCCTGATCCGCGACGACCACCGCTACCTGTGGGCGGGTCTGGTGCTGCTGGCCTGCACCGCGGCGTGCG GCGATCTGGCCAGCGTCCCCTACAACGCGATGCTGCGGCAGTTGGCCGGCCCGCAGCGGTCGGGACGGATCTCCGGAATA GGCTGGGCGTCAGGCTATCTCGGCAGCGTCTTCCTGCTGCTGCTGGTGTACGTGGGTTTTGTCTCCGGCGACGGCGACAC CCGTGGCCTGCTCGGCATCCCGGTTTCCGACGGTCAGAACATCCGCGCGGCGATGCTGCTTGCCGCCGCCTGGTTCCTGC TCTTCGCGCTGCCCCTGCTGCTCACGGTGCCGCCACATCTGCCCGGCGCCGACGAGGTCGACCCGGATCAGCCCTCCGGG GTGTTCGCCGCCTACCGCAGGCTGTGGACGGAGATCGCCGGCGAATGGCGGCGCGACCGCAACATCGTCTACTACCTGCT CGCCAGTGCGGTGTTCCGCGACGGACTCGCCGGGGTGTTCGCCTTCGGTGCGGTGCTCGGGGTGAGCGTCTACGGCATCT CCGAGGCCGACGTCCTGCTGTTCGGTGTGAGCGCATGTGTGGTGGCCGCGGTCGGGGCGGTCATCGGTGGTCTGATCGAC GACCGGGTGGGCTCGAAACCGGTGATCGTGGTGTCGCTGACCGCGATGATCGCGGTCGGTCTGACGCTGCTGAGCCTGTC GGGCCCGTCGGCGTTCTGGGTGTGCGGTCTGCTGCTGTGCCTGTTCATCGGCCCGACGCAGTCCTCGGCACGCACGTTGA TGCTGCGGATGTCGCCGCCCGGTAAGGAGGGTGTCGCGTTCGGCCTCTACACCACGACGGGCCGGGCGGTGGCGTTCCTC GCGCCGTGGCTGTTCTTCATGTTCATCGACCTGTTCGACAGCGACCGCGCGGGCATGGCGGGGCTGTGCGTGGTGCTGGC CGCCGGGCTGGCGGCCATGCTCGCGGTGCGCGCACCGCACCGCCGGCCGGCGTTAGCGCATGCCGACGCAGAAGGTCAGC CCTGA
Upstream 100 bases:
>100_bases GGGCATCGGGGCGGGGTGCGGGTACTGGCATGGGCGGGACTATATCGGGACGGCCGCGTGCGCGGTCACCTCGCATCCGT GGTCTATATCGTGGGCGACC
Downstream 100 bases:
>100_bases CCCGGTGTTCTGTTCCACCTGCGCGCCGTTGATCGTCACCGAACAGGTGACGTCGCGTCCGACGTTGATGATGCTGATGC GTGCCGAACTGCGCGCCGGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTQHAPKPPPSAPTAGRARIVAWALWDCGNTGMNAIVATFVFAVYLTGAVGSDLPGDTSATSWLGRAMTVAGLVVAVLAP VTGVWVQAPRRRRVVLTVLTGTAVLLTASMSLIRDDHRYLWAGLVLLACTAACGDLASVPYNAMLRQLAGPQRSGRISGI GWASGYLGSVFLLLLVYVGFVSGDGDTRGLLGIPVSDGQNIRAAMLLAAAWFLLFALPLLLTVPPHLPGADEVDPDQPSG VFAAYRRLWTEIAGEWRRDRNIVYYLLASAVFRDGLAGVFAFGAVLGVSVYGISEADVLLFGVSACVVAAVGAVIGGLID DRVGSKPVIVVSLTAMIAVGLTLLSLSGPSAFWVCGLLLCLFIGPTQSSARTLMLRMSPPGKEGVAFGLYTTTGRAVAFL APWLFFMFIDLFDSDRAGMAGLCVVLAAGLAAMLAVRAPHRRPALAHADAEGQP
Sequences:
>Translated_454_residues MTQHAPKPPPSAPTAGRARIVAWALWDCGNTGMNAIVATFVFAVYLTGAVGSDLPGDTSATSWLGRAMTVAGLVVAVLAP VTGVWVQAPRRRRVVLTVLTGTAVLLTASMSLIRDDHRYLWAGLVLLACTAACGDLASVPYNAMLRQLAGPQRSGRISGI GWASGYLGSVFLLLLVYVGFVSGDGDTRGLLGIPVSDGQNIRAAMLLAAAWFLLFALPLLLTVPPHLPGADEVDPDQPSG VFAAYRRLWTEIAGEWRRDRNIVYYLLASAVFRDGLAGVFAFGAVLGVSVYGISEADVLLFGVSACVVAAVGAVIGGLID DRVGSKPVIVVSLTAMIAVGLTLLSLSGPSAFWVCGLLLCLFIGPTQSSARTLMLRMSPPGKEGVAFGLYTTTGRAVAFL APWLFFMFIDLFDSDRAGMAGLCVVLAAGLAAMLAVRAPHRRPALAHADAEGQP >Mature_453_residues TQHAPKPPPSAPTAGRARIVAWALWDCGNTGMNAIVATFVFAVYLTGAVGSDLPGDTSATSWLGRAMTVAGLVVAVLAPV TGVWVQAPRRRRVVLTVLTGTAVLLTASMSLIRDDHRYLWAGLVLLACTAACGDLASVPYNAMLRQLAGPQRSGRISGIG WASGYLGSVFLLLLVYVGFVSGDGDTRGLLGIPVSDGQNIRAAMLLAAAWFLLFALPLLLTVPPHLPGADEVDPDQPSGV FAAYRRLWTEIAGEWRRDRNIVYYLLASAVFRDGLAGVFAFGAVLGVSVYGISEADVLLFGVSACVVAAVGAVIGGLIDD RVGSKPVIVVSLTAMIAVGLTLLSLSGPSAFWVCGLLLCLFIGPTQSSARTLMLRMSPPGKEGVAFGLYTTTGRAVAFLA PWLFFMFIDLFDSDRAGMAGLCVVLAAGLAAMLAVRAPHRRPALAHADAEGQP
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47495; Mature: 47364
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHAPKPPPSAPTAGRARIVAWALWDCGNTGMNAIVATFVFAVYLTGAVGSDLPGDTSA CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH TSWLGRAMTVAGLVVAVLAPVTGVWVQAPRRRRVVLTVLTGTAVLLTASMSLIRDDHRYL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH WAGLVLLACTAACGDLASVPYNAMLRQLAGPQRSGRISGIGWASGYLGSVFLLLLVYVGF HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VSGDGDTRGLLGIPVSDGQNIRAAMLLAAAWFLLFALPLLLTVPPHLPGADEVDPDQPSG CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH VFAAYRRLWTEIAGEWRRDRNIVYYLLASAVFRDGLAGVFAFGAVLGVSVYGISEADVLL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH FGVSACVVAAVGAVIGGLIDDRVGSKPVIVVSLTAMIAVGLTLLSLSGPSAFWVCGLLLC HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LFIGPTQSSARTLMLRMSPPGKEGVAFGLYTTTGRAVAFLAPWLFFMFIDLFDSDRAGMA HHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHH GLCVVLAAGLAAMLAVRAPHRRPALAHADAEGQP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQHAPKPPPSAPTAGRARIVAWALWDCGNTGMNAIVATFVFAVYLTGAVGSDLPGDTSA CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH TSWLGRAMTVAGLVVAVLAPVTGVWVQAPRRRRVVLTVLTGTAVLLTASMSLIRDDHRYL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH WAGLVLLACTAACGDLASVPYNAMLRQLAGPQRSGRISGIGWASGYLGSVFLLLLVYVGF HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VSGDGDTRGLLGIPVSDGQNIRAAMLLAAAWFLLFALPLLLTVPPHLPGADEVDPDQPSG CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH VFAAYRRLWTEIAGEWRRDRNIVYYLLASAVFRDGLAGVFAFGAVLGVSVYGISEADVLL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH FGVSACVVAAVGAVIGGLIDDRVGSKPVIVVSLTAMIAVGLTLLSLSGPSAFWVCGLLLC HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LFIGPTQSSARTLMLRMSPPGKEGVAFGLYTTTGRAVAFLAPWLFFMFIDLFDSDRAGMA HHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHH GLCVVLAAGLAAMLAVRAPHRRPALAHADAEGQP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]