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The map label for this gene is ssb [H]

Identifier: 108800582

GI number: 108800582

Start: 3857978

End: 3858484

Strand: Reverse

Name: ssb [H]

Synonym: Mmcs_3616

Alternate gene names: 108800582

Gene position: 3858484-3857978 (Counterclockwise)

Preceding gene: 108800583

Following gene: 108800581

Centisome position: 67.63

GC content: 71.6

Gene sequence:

>507_bases
ATGTTCGAGACGCCCATCACCGTCGTCGGCAACATCGTCAACAACCCGTACCGGCAGCGCGTCGGCGATCAGGAGGTGAT
GAGGTTCCGCGTGGCCAGCAACTCCCGGCGCCGCACCGCCGACGGCTCCTGGGAGCCGGGCAACTCGCTGTTCGTCAGCG
TGAGCTGCTGGGGCAAACTGGTCACCGGGGTCGGTGCCTCGCTCGGGAAGGGTGACGCCGTGATCGTTGTCGGACACGTG
CACACCAGCGAGTACGACGACCGTGAGGGCGTGCGCCGTTCGTCGGTCGAGGTGCGCGCGACCGCGGTCGGCCCGGATCT
CAGCCGCTGCGTCGCCCGGGTCGAGACGTTGCGCCAGTCCGGTCCCGCCGGAGCCGGTGAGGCACCGGAAGCCCCCGAAA
CCGGCGGTGAAGTAGCCGACGGCGCAGACGCCGAGGCCGGCCACACCGGTCCGGGCACCGGTCCGGGCGACCCCGACGCC
GCGGAGGCGCTGCCACTGAGCGCCTAG

Upstream 100 bases:

>100_bases
GTCCGCACCGGGTGCCGCCCGCCGTCGGTGGCGTCCCGGTGAATGGCGGTACCGGCGAGACACCGTCGGCCCGTGGATCA
GACAGGAATCGAGGCTCACC

Downstream 100 bases:

>100_bases
CCACATCCGGCCACGCCTAGGATGGGGCCCGCGGCAACAGACGTTGACCACGCTTTGAGAAAGGCAACACCACGGCATGG
CCGAATTCATCTACACGATG

Product: hypothetical protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MFETPITVVGNIVNNPYRQRVGDQEVMRFRVASNSRRRTADGSWEPGNSLFVSVSCWGKLVTGVGASLGKGDAVIVVGHV
HTSEYDDREGVRRSSVEVRATAVGPDLSRCVARVETLRQSGPAGAGEAPEAPETGGEVADGADAEAGHTGPGTGPGDPDA
AEALPLSA

Sequences:

>Translated_168_residues
MFETPITVVGNIVNNPYRQRVGDQEVMRFRVASNSRRRTADGSWEPGNSLFVSVSCWGKLVTGVGASLGKGDAVIVVGHV
HTSEYDDREGVRRSSVEVRATAVGPDLSRCVARVETLRQSGPAGAGEAPEAPETGGEVADGADAEAGHTGPGTGPGDPDA
AEALPLSA
>Mature_168_residues
MFETPITVVGNIVNNPYRQRVGDQEVMRFRVASNSRRRTADGSWEPGNSLFVSVSCWGKLVTGVGASLGKGDAVIVVGHV
HTSEYDDREGVRRSSVEVRATAVGPDLSRCVARVETLRQSGPAGAGEAPEAPETGGEVADGADAEAGHTGPGTGPGDPDA
AEALPLSA

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17353; Mature: 17353

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETPITVVGNIVNNPYRQRVGDQEVMRFRVASNSRRRTADGSWEPGNSLFVSVSCWGKL
CCCCCHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHH
VTGVGASLGKGDAVIVVGHVHTSEYDDREGVRRSSVEVRATAVGPDLSRCVARVETLRQS
HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHC
GPAGAGEAPEAPETGGEVADGADAEAGHTGPGTGPGDPDAAEALPLSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MFETPITVVGNIVNNPYRQRVGDQEVMRFRVASNSRRRTADGSWEPGNSLFVSVSCWGKL
CCCCCHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHH
VTGVGASLGKGDAVIVVGHVHTSEYDDREGVRRSSVEVRATAVGPDLSRCVARVETLRQS
HHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHC
GPAGAGEAPEAPETGGEVADGADAEAGHTGPGTGPGDPDAAEALPLSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]