| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yebZ [C]
Identifier: 108800583
GI number: 108800583
Start: 3858630
End: 3860627
Strand: Reverse
Name: yebZ [C]
Synonym: Mmcs_3617
Alternate gene names: 108800583
Gene position: 3860627-3858630 (Counterclockwise)
Preceding gene: 108800584
Following gene: 108800582
Centisome position: 67.67
GC content: 72.47
Gene sequence:
>1998_bases ATGACCACGGTTGCGGTGAAGACACGCCCCAGCGCGGTGTGGCCCGTGCTGGTGGGCGTGGCCGCCCTGGCCGGTCTCAC CGCCGCCGGTATCGGCGCGCTGTCGCTCGCGGACGCGTTGACCGCCACCGGGCTGCCCGATCCGGGCCCGGTCACCACCT ACGGGCTGCCGTTCGTGCGGGCGGCCGGGGAGATCGCCGCGGTGACCGCCGTTGGCGCCTTCCTGTTCGCGGCGTTCCTG GTGCCGCCGCAGGCCAACGGCGTGCTCGACGTCGCGGGATACCGGGCGTTGCGGTTGGGCACGGCGGCCTCGGCGGTGTG GACGGTGTGCGCGGTGCTCCTCGTGCCGTTGACCGTGTCGGACGTATCGGGCCAGGCGCTGCGCGACCACCTCAACCCGG TCGAGATCTGGTCGGTGGCGGGTCAGGTCGACGTGGCGAGTGCCTGGCGGTGGACGGCGCTGCTGGCGGCCGTCGTCACG CTGGCCGCCCTGCCGGTGCTGCGATGGGCCTGGACGCCGCCGCTGTTCGCCGGGTCCCTGCTCACGCTCATGCCGCTCGC GCTGACCGGGCATTCGTCGTCGGGCGGTGCGCACGACCTGGCCACCAACAGCCTGGTCATCCATCTCGTCGCCGGCGCGC TGTGGGCCGGCGGTCTGCTGGCGCTGTTGGTGCACGCCCTGCGCGGCGGCGAGCACGGGGACGTCGCGGCCCGCCGGTTC TCCGCGGTCGCGCTGTGGTGCTTCGTCGCGATGGCGCTCAGCGGCGTGATCAACGCGCTGGTGCGGATGTCGCCAGCCGA CCTGTTCCGCACCGAGTACGGCGGTCTGGTGCTCGCCAAGGCGGCGGCGCTGACGGTGCTCGGGGTGCTCGGCTACCTGC AGCGCCGCAAGGGGGTGGCGGGTCTGCAGGCCGACCCCGGCGCGCGGGGTCCGTTGGTGCGCCTGGCGCTGGTCGAGGCC GTGCTGTTCGGCGCGACGTTCGGCATCGCGGTCGGTCTCGGCCGCACACCGCCCCCTCCGCCGGGACGCCAGCCCACCCC GGTGGAGGTCGAGATCGGCTACGACCTGGCCGGTCCGCCGACCGTCACCCGCATCCTGTTCGACTGGCGCTTCGACCTGA TCCTGGGCAGTGCGGCGATCATCCTGGCGCTGGTCTACCTCGCCGGGTGGTGGCGGCTGCGGCGACGCGGTGACGCCTGG CCGGCCGGGCGCACGGTCGCGTGGCTGCTCGGTTGCGCGACGCTGCTGATCACGACGTCCTCGGGACTCGGCCGGTACAT GCCGGCGATGTTCAGCGTGCACATGGTCGCGCACATGCTGCTGTCGATGCTGGTACCGATCCTGCTGGTGCTCGGTGCGC CGGTCACGATGGCGCTGCGCGCGCTGCCGGTGGCGGGAAAGGGCAAGCCGCCGGGCCCGCGGGAGTGGCTGCTGGCCGCC CTGCACTCGCGGGTGTCACGCGTGCTCACCCATCCGATCGTCGCGCTCGCGCTGTTCGTCGCCGGCTTCTACGGGCTGTA CTTCGGGGGACTGTTCGAGGCGGCCGTCGACGACCACGCGGCCCACGTCGTGATGAACATCCACTTCCTGCTCAGTGGCT ACCTCTTCTACTGGGTCGTGATCGGCGTCGACCCGACCCCCCGGCGCATCCCGCAGCTCGCCAAGCTCGCGATCGTGTTC GCCTCGCTGCCCCTGCACGCATTCTTCGGGGTGGTGCTGATGGGCATGAACTCGGTGCTCGCCGAGGACTTCTACCGGTC GCTGCACCTGAGCTGGCACAACGATCTGCTCGCCGACCAGAAGCTCGGCGGCAGCATCGCCTGGGCCGCGGGCGAGATCC CGCTGGTGCTGGTGCTGCTCGCGCTGCTCATCCAGTGGCGCCGCAGCGACGATCGCGACGCGAAACGGCTCGACCGGGCG GCCGAGCGGGACCACGATGCCGACCTGGCCGCCTACAACGCGATGCTGGCCGAACTGGCCCGGCGCGACGGCCGCTGA
Upstream 100 bases:
>100_bases AGTTCATGGCGCGGGAGGCCGAACGTCACCGGGCCAAGACGGGTCGAGCCGCGGTGAACCGCCCGGCAGGGTGACGCCGA ACACGCCATACCCTGGGAAC
Downstream 100 bases:
>100_bases CGGCGCCTGTCCACAGCGCCCGATTCATCCACAGCACCCCCGCGGGTCCGCACCGGGTGCCGCCCGCCGTCGGTGGCGTC CCGGTGAATGGCGGTACCGG
Product: copper resistance D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MTTVAVKTRPSAVWPVLVGVAALAGLTAAGIGALSLADALTATGLPDPGPVTTYGLPFVRAAGEIAAVTAVGAFLFAAFL VPPQANGVLDVAGYRALRLGTAASAVWTVCAVLLVPLTVSDVSGQALRDHLNPVEIWSVAGQVDVASAWRWTALLAAVVT LAALPVLRWAWTPPLFAGSLLTLMPLALTGHSSSGGAHDLATNSLVIHLVAGALWAGGLLALLVHALRGGEHGDVAARRF SAVALWCFVAMALSGVINALVRMSPADLFRTEYGGLVLAKAAALTVLGVLGYLQRRKGVAGLQADPGARGPLVRLALVEA VLFGATFGIAVGLGRTPPPPPGRQPTPVEVEIGYDLAGPPTVTRILFDWRFDLILGSAAIILALVYLAGWWRLRRRGDAW PAGRTVAWLLGCATLLITTSSGLGRYMPAMFSVHMVAHMLLSMLVPILLVLGAPVTMALRALPVAGKGKPPGPREWLLAA LHSRVSRVLTHPIVALALFVAGFYGLYFGGLFEAAVDDHAAHVVMNIHFLLSGYLFYWVVIGVDPTPRRIPQLAKLAIVF ASLPLHAFFGVVLMGMNSVLAEDFYRSLHLSWHNDLLADQKLGGSIAWAAGEIPLVLVLLALLIQWRRSDDRDAKRLDRA AERDHDADLAAYNAMLAELARRDGR
Sequences:
>Translated_665_residues MTTVAVKTRPSAVWPVLVGVAALAGLTAAGIGALSLADALTATGLPDPGPVTTYGLPFVRAAGEIAAVTAVGAFLFAAFL VPPQANGVLDVAGYRALRLGTAASAVWTVCAVLLVPLTVSDVSGQALRDHLNPVEIWSVAGQVDVASAWRWTALLAAVVT LAALPVLRWAWTPPLFAGSLLTLMPLALTGHSSSGGAHDLATNSLVIHLVAGALWAGGLLALLVHALRGGEHGDVAARRF SAVALWCFVAMALSGVINALVRMSPADLFRTEYGGLVLAKAAALTVLGVLGYLQRRKGVAGLQADPGARGPLVRLALVEA VLFGATFGIAVGLGRTPPPPPGRQPTPVEVEIGYDLAGPPTVTRILFDWRFDLILGSAAIILALVYLAGWWRLRRRGDAW PAGRTVAWLLGCATLLITTSSGLGRYMPAMFSVHMVAHMLLSMLVPILLVLGAPVTMALRALPVAGKGKPPGPREWLLAA LHSRVSRVLTHPIVALALFVAGFYGLYFGGLFEAAVDDHAAHVVMNIHFLLSGYLFYWVVIGVDPTPRRIPQLAKLAIVF ASLPLHAFFGVVLMGMNSVLAEDFYRSLHLSWHNDLLADQKLGGSIAWAAGEIPLVLVLLALLIQWRRSDDRDAKRLDRA AERDHDADLAAYNAMLAELARRDGR >Mature_664_residues TTVAVKTRPSAVWPVLVGVAALAGLTAAGIGALSLADALTATGLPDPGPVTTYGLPFVRAAGEIAAVTAVGAFLFAAFLV PPQANGVLDVAGYRALRLGTAASAVWTVCAVLLVPLTVSDVSGQALRDHLNPVEIWSVAGQVDVASAWRWTALLAAVVTL AALPVLRWAWTPPLFAGSLLTLMPLALTGHSSSGGAHDLATNSLVIHLVAGALWAGGLLALLVHALRGGEHGDVAARRFS AVALWCFVAMALSGVINALVRMSPADLFRTEYGGLVLAKAAALTVLGVLGYLQRRKGVAGLQADPGARGPLVRLALVEAV LFGATFGIAVGLGRTPPPPPGRQPTPVEVEIGYDLAGPPTVTRILFDWRFDLILGSAAIILALVYLAGWWRLRRRGDAWP AGRTVAWLLGCATLLITTSSGLGRYMPAMFSVHMVAHMLLSMLVPILLVLGAPVTMALRALPVAGKGKPPGPREWLLAAL HSRVSRVLTHPIVALALFVAGFYGLYFGGLFEAAVDDHAAHVVMNIHFLLSGYLFYWVVIGVDPTPRRIPQLAKLAIVFA SLPLHAFFGVVLMGMNSVLAEDFYRSLHLSWHNDLLADQKLGGSIAWAAGEIPLVLVLLALLIQWRRSDDRDAKRLDRAA ERDHDADLAAYNAMLAELARRDGR
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0102 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 - InterPro: IPR019108 [H]
Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 70263; Mature: 70131
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVAVKTRPSAVWPVLVGVAALAGLTAAGIGALSLADALTATGLPDPGPVTTYGLPFVR CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AAGEIAAVTAVGAFLFAAFLVPPQANGVLDVAGYRALRLGTAASAVWTVCAVLLVPLTVS HCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHC DVSGQALRDHLNPVEIWSVAGQVDVASAWRWTALLAAVVTLAALPVLRWAWTPPLFAGSL CCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LTLMPLALTGHSSSGGAHDLATNSLVIHLVAGALWAGGLLALLVHALRGGEHGDVAARRF HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SAVALWCFVAMALSGVINALVRMSPADLFRTEYGGLVLAKAAALTVLGVLGYLQRRKGVA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC GLQADPGARGPLVRLALVEAVLFGATFGIAVGLGRTPPPPPGRQPTPVEVEIGYDLAGPP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCC TVTRILFDWRFDLILGSAAIILALVYLAGWWRLRRRGDAWPAGRTVAWLLGCATLLITTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC SGLGRYMPAMFSVHMVAHMLLSMLVPILLVLGAPVTMALRALPVAGKGKPPGPREWLLAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHH LHSRVSRVLTHPIVALALFVAGFYGLYFGGLFEAAVDDHAAHVVMNIHFLLSGYLFYWVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IGVDPTPRRIPQLAKLAIVFASLPLHAFFGVVLMGMNSVLAEDFYRSLHLSWHNDLLADQ ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KLGGSIAWAAGEIPLVLVLLALLIQWRRSDDRDAKRLDRAAERDHDADLAAYNAMLAELA HCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RRDGR HHCCC >Mature Secondary Structure TTVAVKTRPSAVWPVLVGVAALAGLTAAGIGALSLADALTATGLPDPGPVTTYGLPFVR CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AAGEIAAVTAVGAFLFAAFLVPPQANGVLDVAGYRALRLGTAASAVWTVCAVLLVPLTVS HCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHC DVSGQALRDHLNPVEIWSVAGQVDVASAWRWTALLAAVVTLAALPVLRWAWTPPLFAGSL CCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LTLMPLALTGHSSSGGAHDLATNSLVIHLVAGALWAGGLLALLVHALRGGEHGDVAARRF HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SAVALWCFVAMALSGVINALVRMSPADLFRTEYGGLVLAKAAALTVLGVLGYLQRRKGVA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC GLQADPGARGPLVRLALVEAVLFGATFGIAVGLGRTPPPPPGRQPTPVEVEIGYDLAGPP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCC TVTRILFDWRFDLILGSAAIILALVYLAGWWRLRRRGDAWPAGRTVAWLLGCATLLITTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC SGLGRYMPAMFSVHMVAHMLLSMLVPILLVLGAPVTMALRALPVAGKGKPPGPREWLLAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHH LHSRVSRVLTHPIVALALFVAGFYGLYFGGLFEAAVDDHAAHVVMNIHFLLSGYLFYWVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IGVDPTPRRIPQLAKLAIVFASLPLHAFFGVVLMGMNSVLAEDFYRSLHLSWHNDLLADQ ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KLGGSIAWAAGEIPLVLVLLALLIQWRRSDDRDAKRLDRAAERDHDADLAAYNAMLAELA HCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RRDGR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476188; 11234002 [H]