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The map label for this gene is 108800575

Identifier: 108800575

GI number: 108800575

Start: 3847371

End: 3848039

Strand: Reverse

Name: 108800575

Synonym: Mmcs_3609

Alternate gene names: NA

Gene position: 3848039-3847371 (Counterclockwise)

Preceding gene: 108800578

Following gene: 108800574

Centisome position: 67.44

GC content: 70.25

Gene sequence:

>669_bases
ATGGCGCATCGCAAGAAAAGCCCGTCGAGACCGACCGGCCACAAGCGTGCGGCCGCGGTCGGCCCCTCGGGTCCCGCGGC
GAGCGCCCGTGTGCTGCACAGTGTCGAAATCCACGGCGGAGAGACCGCGGCCTCCATCCACGACGGCTCGCTGTGGGGAC
GCCGTCGTGTCCTGCTGCTCAACTCCACCTACGAACCGCTGACCGCGCTGCCGCTGCGTCGCGCGGTGGTGATGCTGATC
TGCGGTAAGGCCGACGTCGTCCACGAGGATCCCTCAGGACCGGTGATCCACTCGGCGACCCGCAGCATCTCGGTGCCGAC
GGTCATCCGGCTGCGCAGTTTCGTGCGCGTGCCCTACCGGGCCCGCGTCCCGATGACCCGGGCGGCGTTGATGCACCGCG
ACCGGTTCCGCTGCGCGTATTGCGGCGCGAAGGCCGACACCGTCGACCACGTGGTGCCCCGCAGTCGCGGCGGCGACCAT
TCGTGGGAGAACTGTGTCGCCGCGTGCGCACCGTGCAACCACCGCAAGGCCGATCACCTGCTGGCCGAACTGGGCTGGAC
ACTGCGCCACGTGCCGCTGCCGCCCAAGGGGCAGCACTGGCGGCTGCTGTCGACGGTCAAGGAACTCGACCCGGCGTGGA
TGCGATACCTGGGTGAGGGCGCGGCCTGA

Upstream 100 bases:

>100_bases
GGTGCCGTCATCGGATGTTCACCGGACTGACCTGCGAACACGTACCGAATTGCCGTGCGGTGGCCGCCGATCCATGGTGG
ACTGTCTCCTCGGAGGACGT

Downstream 100 bases:

>100_bases
TACCGCGGTGGGATACCGTTTCACACCGTGACCACCTCCGTGATCCTCGTCCTCGTCCTCGTGCCGTTGGGACTGACCGC
GGTCCTGGCCTTGCTGATCT

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain Protein; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAHRKKSPSRPTGHKRAAAVGPSGPAASARVLHSVEIHGGETAASIHDGSLWGRRRVLLLNSTYEPLTALPLRRAVVMLI
CGKADVVHEDPSGPVIHSATRSISVPTVIRLRSFVRVPYRARVPMTRAALMHRDRFRCAYCGAKADTVDHVVPRSRGGDH
SWENCVAACAPCNHRKADHLLAELGWTLRHVPLPPKGQHWRLLSTVKELDPAWMRYLGEGAA

Sequences:

>Translated_222_residues
MAHRKKSPSRPTGHKRAAAVGPSGPAASARVLHSVEIHGGETAASIHDGSLWGRRRVLLLNSTYEPLTALPLRRAVVMLI
CGKADVVHEDPSGPVIHSATRSISVPTVIRLRSFVRVPYRARVPMTRAALMHRDRFRCAYCGAKADTVDHVVPRSRGGDH
SWENCVAACAPCNHRKADHLLAELGWTLRHVPLPPKGQHWRLLSTVKELDPAWMRYLGEGAA
>Mature_221_residues
AHRKKSPSRPTGHKRAAAVGPSGPAASARVLHSVEIHGGETAASIHDGSLWGRRRVLLLNSTYEPLTALPLRRAVVMLIC
GKADVVHEDPSGPVIHSATRSISVPTVIRLRSFVRVPYRARVPMTRAALMHRDRFRCAYCGAKADTVDHVVPRSRGGDHS
WENCVAACAPCNHRKADHLLAELGWTLRHVPLPPKGQHWRLLSTVKELDPAWMRYLGEGAA

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24372; Mature: 24241

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRKKSPSRPTGHKRAAAVGPSGPAASARVLHSVEIHGGETAASIHDGSLWGRRRVLLL
CCCCCCCCCCCCCCCCEEECCCCCCCCHHHHEEEEEECCCCEECEECCCCCCCCEEEEEE
NSTYEPLTALPLRRAVVMLICGKADVVHEDPSGPVIHSATRSISVPTVIRLRSFVRVPYR
ECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCC
ARVPMTRAALMHRDRFRCAYCGAKADTVDHVVPRSRGGDHSWENCVAACAPCNHRKADHL
CCCCHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHH
LAELGWTLRHVPLPPKGQHWRLLSTVKELDPAWMRYLGEGAA
HHHHCCHHEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure 
AHRKKSPSRPTGHKRAAAVGPSGPAASARVLHSVEIHGGETAASIHDGSLWGRRRVLLL
CCCCCCCCCCCCCCCEEECCCCCCCCHHHHEEEEEECCCCEECEECCCCCCCCEEEEEE
NSTYEPLTALPLRRAVVMLICGKADVVHEDPSGPVIHSATRSISVPTVIRLRSFVRVPYR
ECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCC
ARVPMTRAALMHRDRFRCAYCGAKADTVDHVVPRSRGGDHSWENCVAACAPCNHRKADHL
CCCCHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHH
LAELGWTLRHVPLPPKGQHWRLLSTVKELDPAWMRYLGEGAA
HHHHCCHHEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA