| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800578
Identifier: 108800578
GI number: 108800578
Start: 3850208
End: 3850867
Strand: Reverse
Name: 108800578
Synonym: Mmcs_3612
Alternate gene names: NA
Gene position: 3850867-3850208 (Counterclockwise)
Preceding gene: 108800579
Following gene: 108800575
Centisome position: 67.49
GC content: 71.82
Gene sequence:
>660_bases ATGACCGGCCATGAGCGTGGGCTCTGGCTGACCGATCCCGGTCACCGCGACGATCTGGCCACCTTCGCCGAACGGGCGGT GCGGCTCGACGGCGCCGCTGTGGTGCGGTTGCGCGAACGGGCCGGCGGCGGCGTGGTCGCCTTCGTGGCAACGGGTTTCG ACGTACTGGCCAGCCGGGTGGTCAGCGGACGGCTGCGCCCGAAGGACCTGTGCGCCGGCGCCGACGCCCTCGTGGCGGGG CTGGCGGGTATCGACGCGTCGGGGTTCGTCGACACCGGCTTCCCGATGGACTCGGCGTGGCGTGGTGCGGTGCCTTCCGA GACGGGCTTCACCCATCTCGACGACGTGCCGGCCCGGGTGATGCTCGATTTGGTGACGCAGGGTGGCGCGCTGGCGCGCC AGCACAGCGGCGCCCACGGTCCGCCGTCGTCGCTGCTCGATCAGGAGGTTATCGCGGTCAGCGGGGACGGTGAGAGCGTC GGTGTCCCGATGCGGTGCGTATTCGCGCTCACCGCAATGGGATTCCTACCGCAGAGCAGCGCCGCGCTCGATGCCGGCGA CATCGTGCGGATCCGCGTCTCGCCCACCTGGCTGCGGATCGACGCGCCGTTCGGTTCGGTGCTGCGGCGGCGCGGCGACC CGGCGGTCGTGTTGCGTTAG
Upstream 100 bases:
>100_bases CGGTCATCGCCGAGACCCAGTTGGCCGCGGTGCACATCGAGGAGCAGCGGCTCGAACGGCTGACGCCCGAGCAGCGCACC TATCTGCAACGTTATCTGCG
Downstream 100 bases:
>100_bases ACCACCCAGGCGGCCGTGTCGGGGGGTAGCCGCCGATCCTGGGGCGAGCGAAGCGACGGGGAATGTGCCTGAAGGGGCGC GCTGGCGAGCAGCACCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTGHERGLWLTDPGHRDDLATFAERAVRLDGAAVVRLRERAGGGVVAFVATGFDVLASRVVSGRLRPKDLCAGADALVAG LAGIDASGFVDTGFPMDSAWRGAVPSETGFTHLDDVPARVMLDLVTQGGALARQHSGAHGPPSSLLDQEVIAVSGDGESV GVPMRCVFALTAMGFLPQSSAALDAGDIVRIRVSPTWLRIDAPFGSVLRRRGDPAVVLR
Sequences:
>Translated_219_residues MTGHERGLWLTDPGHRDDLATFAERAVRLDGAAVVRLRERAGGGVVAFVATGFDVLASRVVSGRLRPKDLCAGADALVAG LAGIDASGFVDTGFPMDSAWRGAVPSETGFTHLDDVPARVMLDLVTQGGALARQHSGAHGPPSSLLDQEVIAVSGDGESV GVPMRCVFALTAMGFLPQSSAALDAGDIVRIRVSPTWLRIDAPFGSVLRRRGDPAVVLR >Mature_218_residues TGHERGLWLTDPGHRDDLATFAERAVRLDGAAVVRLRERAGGGVVAFVATGFDVLASRVVSGRLRPKDLCAGADALVAGL AGIDASGFVDTGFPMDSAWRGAVPSETGFTHLDDVPARVMLDLVTQGGALARQHSGAHGPPSSLLDQEVIAVSGDGESVG VPMRCVFALTAMGFLPQSSAALDAGDIVRIRVSPTWLRIDAPFGSVLRRRGDPAVVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22862; Mature: 22731
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGHERGLWLTDPGHRDDLATFAERAVRLDGAAVVRLRERAGGGVVAFVATGFDVLASRV CCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHEEEEHHHCCCCEEEEECCCHHHHHHHH VSGRLRPKDLCAGADALVAGLAGIDASGFVDTGFPMDSAWRGAVPSETGFTHLDDVPARV HHCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH MLDLVTQGGALARQHSGAHGPPSSLLDQEVIAVSGDGESVGVPMRCVFALTAMGFLPQSS HHHHHHCCCHHHHHCCCCCCCHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC AALDAGDIVRIRVSPTWLRIDAPFGSVLRRRGDPAVVLR CCCCCCCEEEEEECCEEEEEECCHHHHHHHCCCCEEEEC >Mature Secondary Structure TGHERGLWLTDPGHRDDLATFAERAVRLDGAAVVRLRERAGGGVVAFVATGFDVLASRV CCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHEEEEHHHCCCCEEEEECCCHHHHHHHH VSGRLRPKDLCAGADALVAGLAGIDASGFVDTGFPMDSAWRGAVPSETGFTHLDDVPARV HHCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH MLDLVTQGGALARQHSGAHGPPSSLLDQEVIAVSGDGESVGVPMRCVFALTAMGFLPQSS HHHHHHCCCHHHHHCCCCCCCHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC AALDAGDIVRIRVSPTWLRIDAPFGSVLRRRGDPAVVLR CCCCCCCEEEEEECCEEEEEECCHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA