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The map label for this gene is yuxL [H]

Identifier: 108800526

GI number: 108800526

Start: 3790093

End: 3792093

Strand: Reverse

Name: yuxL [H]

Synonym: Mmcs_3560

Alternate gene names: 108800526

Gene position: 3792093-3790093 (Counterclockwise)

Preceding gene: 108800529

Following gene: 108800525

Centisome position: 66.46

GC content: 71.61

Gene sequence:

>2001_bases
ATGCCGGACACTGTCTCGCCGTTCGCGGAGCTCGACGCCTACCTCGCACTCCCACGGGTGGCCGGGCTCGCCGTGTCTCC
CGACGGGTCGCGGGTGGTGACCACGATCAGCGAGCTCGACGACAAGCGCACCGCGTTCGTCACCGCGATCTGGGAACTGG
ACCCCGCCGGGAGGCGCCCCGCCCGCCGCCTCACCCGCGGCGCGAAGGGGGAGCGGGCGCCGGCGTTCACCCCGGGCGGA
GATCTGCTGTTCCTCGCGTCGCGCCCCACCGGGGATTCCGCCGAGGACGGGGACTCGCCGCCCGCGGCGCTGTGGCGGCT
GCCCGCACAGGGCGGGGAAGCGGTCGAGGAACTCACCCCGCCCGGCGGTGTAACGTCCGTGCGCTGCGCCCGGGCCGCGG
GGGTCGCGGTGGTGAGCGCGCCGATGCTGGTCTCGGCCGCCGACCTCGACGACGACAAGAGGCTGCGTGCGCTGAGAAAG
GACAACAAGGTCTCCGCGGTCCTGCACAGCGGGTATCCGGTGCGCTCCTGGGATCACGACCTCGGACCCGATCAGCCGCA
TCTGCTCGACGCCGCCGACGGCCGCGACCTCACACCCCGACCGGGCGGCGGTCTGCGCGACGCCGCCGTCGACGTCAGCG
ACGACGGCAGCTTTCTCGTCACCTCCTGGCAGAACCCGTCCGCCGGGGCGGCGCTGCGCGACACCCTGGTACGCGTCGAG
GTCGGCAGCGGTGAGCGCACCACGGTCGCCGACGACCCCGGGGCCGATCTGGGCCATCCGGCCATCTCCCCGGACGGCCG
GATGCTGGCGTTCACCCGCGAGACGATCTCCACTCCGCTGCAGGCCCCGCGAATCACATTGTGCTGCCTGCATTTCGGTG
GTGAGGTGCGCGAACTGACAGCCCACTGGGACCGGTGGCCGACATCGGTCACCTGGAGCCGCGACGGCGCGAAACTAATC
GTCACCGCCGACGACAACGGCCGCGGGCCGATCTTCCTGATCGACCCGGACACCGGCGCTGTCACCAAGCTGACCGACGA
CGACCACACCTACACCGACGTCGTCACCGCACCCGGCGGTGTGCTCTTCGCGATCCGCCACAACTACGCCGCCCCACCGC
ACCCGGTGCGCATCGACCCCGACGGCACCGTCACCGTCCTGCCGACCGTCGACGCCCCGAGGCTGCCGGGCACGCTGAGC
GAGATCACCGCCACCGCACCCGACGGCGCCGCCGTGCGGTCCTGGCTGGCCCTGCCCGACGGCGCCGGCGAGAACGCCCC
GGCGCCGCTGCTGCTGTGGATCCACGGCGGACCGCTCGCCAGTTGGAACGCCTGGCACTGGCGGTGGAATCCGTGGCTGA
TGGTCGCGCAGGGCTACGCCGTGCTGCTCCCCGATCCGGCCCTGTCCACCGGCTACGGCCAGGACTTCATCCAGCGGGGC
TGGGGCGCCTGGGGCGAGGCGCCCTACACGGATCTGATGGCCGCCACCGACGCGGCGACCGCCGACCCGCGCATCGACGG
CACCCGCACCGCGGCGATGGGTGGGTCGTTCGGCGGATACATGGCCAACTGGATCGCCGGGCACACCGACCGGTTCGATG
CGATCGTCACCCACGCCAGCCTGTGGGCGCTCGATCAGTTCGGTCCCACCACCGACGGCGCGTACTGGTGGGCGCGCGAG
ATGACACCCGAGATGGCCGAACGCAATTCACCGCACCTGTTCGTGGAGAACATCGCCACGCCGATGTTGGTGATCCACGG
CGACAAGGACTACCGGGTGCCGATCGGCGAAGCGCTGCGGCTCTGGTACGAGCTGCTCACCAGATCGCGCCTGCCCGCCG
CGGACGACGGCACCGGACCGCACCGCTTCCTCTACTACCCCTCGGAGAACCACTGGGTGCTTGCTCCCCAGCATGCGAAG
CTCTGGTACCAGGTCGTCTTCGCATTCCTGGCCCGGCACGTGCTCGGGCGGGACGTCGAGCTGCCCGAACTGCTCGGGTA
G

Upstream 100 bases:

>100_bases
CCACCGCGGTGGCCAGACCGGCGATACCCGCGCCCACGACCAGAATCTGCTGCGACATCGGTCGAACCTAACGCGCACGG
TGTGCTACCTACTTGAAGTC

Downstream 100 bases:

>100_bases
CGTCGAAACCATGAGTCCCGCACAGCAGCGTGAGTTCGACATCGTCGTCTACGGAGCCACCGGATTCGTCGGGAAACTGA
CCGCCGAATACCTGGCCGAC

Product: peptidase S9, prolyl oligopeptidase active site region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MPDTVSPFAELDAYLALPRVAGLAVSPDGSRVVTTISELDDKRTAFVTAIWELDPAGRRPARRLTRGAKGERAPAFTPGG
DLLFLASRPTGDSAEDGDSPPAALWRLPAQGGEAVEELTPPGGVTSVRCARAAGVAVVSAPMLVSAADLDDDKRLRALRK
DNKVSAVLHSGYPVRSWDHDLGPDQPHLLDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVE
VGSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHFGGEVRELTAHWDRWPTSVTWSRDGAKLI
VTADDNGRGPIFLIDPDTGAVTKLTDDDHTYTDVVTAPGGVLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDAPRLPGTLS
EITATAPDGAAVRSWLALPDGAGENAPAPLLLWIHGGPLASWNAWHWRWNPWLMVAQGYAVLLPDPALSTGYGQDFIQRG
WGAWGEAPYTDLMAATDAATADPRIDGTRTAAMGGSFGGYMANWIAGHTDRFDAIVTHASLWALDQFGPTTDGAYWWARE
MTPEMAERNSPHLFVENIATPMLVIHGDKDYRVPIGEALRLWYELLTRSRLPAADDGTGPHRFLYYPSENHWVLAPQHAK
LWYQVVFAFLARHVLGRDVELPELLG

Sequences:

>Translated_666_residues
MPDTVSPFAELDAYLALPRVAGLAVSPDGSRVVTTISELDDKRTAFVTAIWELDPAGRRPARRLTRGAKGERAPAFTPGG
DLLFLASRPTGDSAEDGDSPPAALWRLPAQGGEAVEELTPPGGVTSVRCARAAGVAVVSAPMLVSAADLDDDKRLRALRK
DNKVSAVLHSGYPVRSWDHDLGPDQPHLLDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVE
VGSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHFGGEVRELTAHWDRWPTSVTWSRDGAKLI
VTADDNGRGPIFLIDPDTGAVTKLTDDDHTYTDVVTAPGGVLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDAPRLPGTLS
EITATAPDGAAVRSWLALPDGAGENAPAPLLLWIHGGPLASWNAWHWRWNPWLMVAQGYAVLLPDPALSTGYGQDFIQRG
WGAWGEAPYTDLMAATDAATADPRIDGTRTAAMGGSFGGYMANWIAGHTDRFDAIVTHASLWALDQFGPTTDGAYWWARE
MTPEMAERNSPHLFVENIATPMLVIHGDKDYRVPIGEALRLWYELLTRSRLPAADDGTGPHRFLYYPSENHWVLAPQHAK
LWYQVVFAFLARHVLGRDVELPELLG
>Mature_665_residues
PDTVSPFAELDAYLALPRVAGLAVSPDGSRVVTTISELDDKRTAFVTAIWELDPAGRRPARRLTRGAKGERAPAFTPGGD
LLFLASRPTGDSAEDGDSPPAALWRLPAQGGEAVEELTPPGGVTSVRCARAAGVAVVSAPMLVSAADLDDDKRLRALRKD
NKVSAVLHSGYPVRSWDHDLGPDQPHLLDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVEV
GSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHFGGEVRELTAHWDRWPTSVTWSRDGAKLIV
TADDNGRGPIFLIDPDTGAVTKLTDDDHTYTDVVTAPGGVLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDAPRLPGTLSE
ITATAPDGAAVRSWLALPDGAGENAPAPLLLWIHGGPLASWNAWHWRWNPWLMVAQGYAVLLPDPALSTGYGQDFIQRGW
GAWGEAPYTDLMAATDAATADPRIDGTRTAAMGGSFGGYMANWIAGHTDRFDAIVTHASLWALDQFGPTTDGAYWWAREM
TPEMAERNSPHLFVENIATPMLVIHGDKDYRVPIGEALRLWYELLTRSRLPAADDGTGPHRFLYYPSENHWVLAPQHAKL
WYQVVFAFLARHVLGRDVELPELLG

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=450, Percent_Identity=22.8888888888889, Blast_Score=87, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI25144537, Length=250, Percent_Identity=26.4, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI25144540, Length=253, Percent_Identity=26.4822134387352, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI25149159, Length=360, Percent_Identity=26.9444444444444, Blast_Score=74, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 71766; Mature: 71635

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTVSPFAELDAYLALPRVAGLAVSPDGSRVVTTISELDDKRTAFVTAIWELDPAGRRP
CCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEEHHHCCCCCEEEEEEEEECCCCCCCH
ARRLTRGAKGERAPAFTPGGDLLFLASRPTGDSAEDGDSPPAALWRLPAQGGEAVEELTP
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHEEECCCCCCHHHHHCCC
PGGVTSVRCARAAGVAVVSAPMLVSAADLDDDKRLRALRKDNKVSAVLHSGYPVRSWDHD
CCCCCHHHHHHHCCEEEEECCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
LGPDQPHLLDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVE
CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHEEEEEEEE
VGSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHFGGEVRELT
ECCCCCEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEEEECCCCHHHHH
AHWDRWPTSVTWSRDGAKLIVTADDNGRGPIFLIDPDTGAVTKLTDDDHTYTDVVTAPGG
HHHHCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCEEEECCCCCCEEEEEECCCC
VLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDAPRLPGTLSEITATAPDGAAVRSWLALPD
EEEEEECCCCCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHEECCCCCHHHHHHEECCC
GAGENAPAPLLLWIHGGPLASWNAWHWRWNPWLMVAQGYAVLLPDPALSTGYGQDFIQRG
CCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCEEEECCCCCCCCCCHHHHHHC
WGAWGEAPYTDLMAATDAATADPRIDGTRTAAMGGSFGGYMANWIAGHTDRFDAIVTHAS
CCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHH
LWALDQFGPTTDGAYWWAREMTPEMAERNSPHLFVENIATPMLVIHGDKDYRVPIGEALR
HHHHHHCCCCCCCCEEEEHHCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHH
LWYELLTRSRLPAADDGTGPHRFLYYPSENHWVLAPQHAKLWYQVVFAFLARHVLGRDVE
HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCC
LPELLG
CHHHCC
>Mature Secondary Structure 
PDTVSPFAELDAYLALPRVAGLAVSPDGSRVVTTISELDDKRTAFVTAIWELDPAGRRP
CCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEEHHHCCCCCEEEEEEEEECCCCCCCH
ARRLTRGAKGERAPAFTPGGDLLFLASRPTGDSAEDGDSPPAALWRLPAQGGEAVEELTP
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHEEECCCCCCHHHHHCCC
PGGVTSVRCARAAGVAVVSAPMLVSAADLDDDKRLRALRKDNKVSAVLHSGYPVRSWDHD
CCCCCHHHHHHHCCEEEEECCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
LGPDQPHLLDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVE
CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCHHHEEEEEEEE
VGSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHFGGEVRELT
ECCCCCEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEEEECCCCHHHHH
AHWDRWPTSVTWSRDGAKLIVTADDNGRGPIFLIDPDTGAVTKLTDDDHTYTDVVTAPGG
HHHHCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCEEEECCCCCCEEEEEECCCC
VLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDAPRLPGTLSEITATAPDGAAVRSWLALPD
EEEEEECCCCCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHEECCCCCHHHHHHEECCC
GAGENAPAPLLLWIHGGPLASWNAWHWRWNPWLMVAQGYAVLLPDPALSTGYGQDFIQRG
CCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEECCCEEEECCCCCCCCCCHHHHHHC
WGAWGEAPYTDLMAATDAATADPRIDGTRTAAMGGSFGGYMANWIAGHTDRFDAIVTHAS
CCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHH
LWALDQFGPTTDGAYWWAREMTPEMAERNSPHLFVENIATPMLVIHGDKDYRVPIGEALR
HHHHHHCCCCCCCCEEEEHHCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHH
LWYELLTRSRLPAADDGTGPHRFLYYPSENHWVLAPQHAKLWYQVVFAFLARHVLGRDVE
HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCC
LPELLG
CHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]