| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800485
Identifier: 108800485
GI number: 108800485
Start: 3747317
End: 3748072
Strand: Reverse
Name: 108800485
Synonym: Mmcs_3519
Alternate gene names: NA
Gene position: 3748072-3747317 (Counterclockwise)
Preceding gene: 108800486
Following gene: 108800484
Centisome position: 65.69
GC content: 75.13
Gene sequence:
>756_bases GTGAGCGACGAGGCGGCGCCGCTGGATCTGCGACTGGTGCCGGCGGCGTCGACCGGCTGGGCCGTGACCGCGGCCGCAAT CCACTGGCACACCGCGGCCGCGGTACTCGTGCTGCTCGGCGGGATCGCCGCGACCGCTGCGGCGGCGGTGTGGGGTGGTG CCGCGGTCACGGCAGTCGCGGCGATACGGTCGGCTGCCGCCGGGCTCGCGGGCGTCGCCGTGGTGGGTGCGGCGTTCACC GTCGCGGTGACCGTCCGCGTCGACCAGGTGCGCCACCATCCGGTCACGGCGCTCTACGGGGCCACTGCGCCGGTGACCGT CACACCGGGCGACAGCCCGCGACCGCTCGGCGGCGGGCGGCTGATGTTCCGGGCTGTCCTGCACGCGGTGGACGGCAGGC CCATGTCGGGCCGGGTGGTGGTGTTCGCGTCGGCGAAGGGGTTCTCGGAGGTGAGCGCGGGCCGCCCGGCGGCGTTTCGC GCCGGCATCGGCAGGCCCACGCGGCGGGACCTCACCGTCGCCGTTCTGTCGGCCACGGGGGAGGCGGCCGTGGGGACGGC GCCGCCGGTGCATCGCATGGCGCAGTCGGTCCGGAGCGGGTTGGCCGACGCGGCGCGCGGGGCGCTGCCGGTCGATCAGG CGGCGATGCTGCCCGCTCTCGTACTCGGTGACACCGCGACCGTTCCGCCGGACACGACGGCGGACTTCCGTACCGCGGGT TTGACCCATCTGAGCCTATCATTGAGGCATGGATAG
Upstream 100 bases:
>100_bases GGCGAGATGCCCACGGCGCGTTCAGCAGTGTCGATCAGCTCGGTGACGTGGACGGCATCGGACCGGCGCGGCTGGCCAAA CTGCGCGATCTGGTCCATGT
Downstream 100 bases:
>100_bases ACTCGTCGGCATCTACTGCCGAATCAGCGCCGACGCGAGTGGCGACGCGCTCGGTGTCCAGCGGCAAGAGGCCGACGCGC GGAAGCTGTGCGCTGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Competence Protein; DNA Internalization Competence
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSDEAAPLDLRLVPAASTGWAVTAAAIHWHTAAAVLVLLGGIAATAAAAVWGGAAVTAVAAIRSAAAGLAGVAVVGAAFT VAVTVRVDQVRHHPVTALYGATAPVTVTPGDSPRPLGGGRLMFRAVLHAVDGRPMSGRVVVFASAKGFSEVSAGRPAAFR AGIGRPTRRDLTVAVLSATGEAAVGTAPPVHRMAQSVRSGLADAARGALPVDQAAMLPALVLGDTATVPPDTTADFRTAG LTHLSLSLRHG
Sequences:
>Translated_251_residues MSDEAAPLDLRLVPAASTGWAVTAAAIHWHTAAAVLVLLGGIAATAAAAVWGGAAVTAVAAIRSAAAGLAGVAVVGAAFT VAVTVRVDQVRHHPVTALYGATAPVTVTPGDSPRPLGGGRLMFRAVLHAVDGRPMSGRVVVFASAKGFSEVSAGRPAAFR AGIGRPTRRDLTVAVLSATGEAAVGTAPPVHRMAQSVRSGLADAARGALPVDQAAMLPALVLGDTATVPPDTTADFRTAG LTHLSLSLRHG >Mature_250_residues SDEAAPLDLRLVPAASTGWAVTAAAIHWHTAAAVLVLLGGIAATAAAAVWGGAAVTAVAAIRSAAAGLAGVAVVGAAFTV AVTVRVDQVRHHPVTALYGATAPVTVTPGDSPRPLGGGRLMFRAVLHAVDGRPMSGRVVVFASAKGFSEVSAGRPAAFRA GIGRPTRRDLTVAVLSATGEAAVGTAPPVHRMAQSVRSGLADAARGALPVDQAAMLPALVLGDTATVPPDTTADFRTAGL THLSLSLRHG
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24968; Mature: 24837
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEAAPLDLRLVPAASTGWAVTAAAIHWHTAAAVLVLLGGIAATAAAAVWGGAAVTAVA CCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH AIRSAAAGLAGVAVVGAAFTVAVTVRVDQVRHHPVTALYGATAPVTVTPGDSPRPLGGGR HHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCHH LMFRAVLHAVDGRPMSGRVVVFASAKGFSEVSAGRPAAFRAGIGRPTRRDLTVAVLSATG HHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCCCCHHHHCCCCCCCCCCEEEEEEECCC EAAVGTAPPVHRMAQSVRSGLADAARGALPVDQAAMLPALVLGDTATVPPDTTADFRTAG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCCCCCCCCCHHHCC LTHLSLSLRHG EEEEEEEECCC >Mature Secondary Structure SDEAAPLDLRLVPAASTGWAVTAAAIHWHTAAAVLVLLGGIAATAAAAVWGGAAVTAVA CCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH AIRSAAAGLAGVAVVGAAFTVAVTVRVDQVRHHPVTALYGATAPVTVTPGDSPRPLGGGR HHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCHH LMFRAVLHAVDGRPMSGRVVVFASAKGFSEVSAGRPAAFRAGIGRPTRRDLTVAVLSATG HHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCCCCHHHHCCCCCCCCCCEEEEEEECCC EAAVGTAPPVHRMAQSVRSGLADAARGALPVDQAAMLPALVLGDTATVPPDTTADFRTAG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCCCCCCCCCHHHCC LTHLSLSLRHG EEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA