| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800478
Identifier: 108800478
GI number: 108800478
Start: 3738809
End: 3739615
Strand: Reverse
Name: 108800478
Synonym: Mmcs_3512
Alternate gene names: NA
Gene position: 3739615-3738809 (Counterclockwise)
Preceding gene: 108800480
Following gene: 108800477
Centisome position: 65.54
GC content: 75.71
Gene sequence:
>807_bases GTGTCGGGCGCCAACGTGACGATCGTGTGCGGGGCGGTGCTGCTCAGCGCGGCGGTGCTCGGACCGCGCGCGGCGGTCAC GCTGGCCGCGCTGGCGCTGATCACCTTCGTCGTGGTCGTGCAGCCGTCGGCGAGCGTGCTGCGTGCCGCGGTGATGGGGG CGATCACCCTGCTCGCGCTGGTCACACACCGCCGCAGGCAGGCGATCCCGGCGCTGGCGGCCAGCGTGCTGCTCCTCCTG ATCGTCGCGCCGGAGCTGGCCGTGGACGCCGGGTTCGCGCTGTCGGTGGCGGCGACAGCCGGTCTGGTGGTGATCGCGCC GGTGTGGTCGCGGCGGCTGACCGGGCGGGGGTGGCCCAAACCGGTCGCCGACGCCGTCGGCGTGGCGATGGCGGCGCAGT TGGTGACCGCACCGCTGGTGGCGGGGATCTCGGGCCGCGTCAGCCTGGTGTCGGTGCTGGCGAATATCGTTGTCGCGCCG GTCATTCCACCGATCACGGTGATCGGCACCGCTGCGGCGGCGCTGTGTTGGCTGTGGCCGGCGGGCGCCGGACTGCTGAT CCGGTTCACCGGACCGCCGCTGTGGTGGCTGCTGCGGGTGGCCGACTGGGCGGCGGCGGTGCCAGGCGCGTCGGTGCCGG TGCCGTCCGGCTGGGCCGGTGTCGGGCTGGTCGCGGCGGGTGGGATCGCGCTCGTCGTGCTGTGGCGGTGGCGGTGGGTG CGGCTGGCCGCCGGTGCGGCGGTGCTGGGTCTGGTGGCGTGGTCGGCGTCCGGCCACGCCGCGCTCGGCGGTGTCGGCGG CGCGTGA
Upstream 100 bases:
>100_bases CCATCGCGGTCAGCGTCGGCGGCCGGTCACGTCCTGTCGGTTCGGTCATGGTGGTTGCCCCTTTCCGTGTCTTGTCTACA CACTGACACACCTGACGGCG
Downstream 100 bases:
>100_bases CACGATCGTCGGGTGAGCCAACAGGTCGCAGCCCTACATCTGGTCTTGGGGGACGAGGAACTGCTCGTCGAACGCGCGGT GGCGGCGGTGCTGAAGAGTG
Product: ComEC/Rec2-like protein
Products: NA
Alternate protein names: DNA Internalization-Related Competence; Competence Protein; ComEC Operon Protein; ComEC/Rec2-Like Protein; DNA Internalization Competence; Competence Protein ComEC
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSGANVTIVCGAVLLSAAVLGPRAAVTLAALALITFVVVVQPSASVLRAAVMGAITLLALVTHRRRQAIPALAASVLLLL IVAPELAVDAGFALSVAATAGLVVIAPVWSRRLTGRGWPKPVADAVGVAMAAQLVTAPLVAGISGRVSLVSVLANIVVAP VIPPITVIGTAAAALCWLWPAGAGLLIRFTGPPLWWLLRVADWAAAVPGASVPVPSGWAGVGLVAAGGIALVVLWRWRWV RLAAGAAVLGLVAWSASGHAALGGVGGA
Sequences:
>Translated_268_residues MSGANVTIVCGAVLLSAAVLGPRAAVTLAALALITFVVVVQPSASVLRAAVMGAITLLALVTHRRRQAIPALAASVLLLL IVAPELAVDAGFALSVAATAGLVVIAPVWSRRLTGRGWPKPVADAVGVAMAAQLVTAPLVAGISGRVSLVSVLANIVVAP VIPPITVIGTAAAALCWLWPAGAGLLIRFTGPPLWWLLRVADWAAAVPGASVPVPSGWAGVGLVAAGGIALVVLWRWRWV RLAAGAAVLGLVAWSASGHAALGGVGGA >Mature_267_residues SGANVTIVCGAVLLSAAVLGPRAAVTLAALALITFVVVVQPSASVLRAAVMGAITLLALVTHRRRQAIPALAASVLLLLI VAPELAVDAGFALSVAATAGLVVIAPVWSRRLTGRGWPKPVADAVGVAMAAQLVTAPLVAGISGRVSLVSVLANIVVAPV IPPITVIGTAAAALCWLWPAGAGLLIRFTGPPLWWLLRVADWAAAVPGASVPVPSGWAGVGLVAAGGIALVVLWRWRWVR LAAGAAVLGLVAWSASGHAALGGVGGA
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26664; Mature: 26533
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGANVTIVCGAVLLSAAVLGPRAAVTLAALALITFVVVVQPSASVLRAAVMGAITLLAL CCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VTHRRRQAIPALAASVLLLLIVAPELAVDAGFALSVAATAGLVVIAPVWSRRLTGRGWPK HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCEEEEECHHHHHCCCCCCCC PVADAVGVAMAAQLVTAPLVAGISGRVSLVSVLANIVVAPVIPPITVIGTAAAALCWLWP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC AGAGLLIRFTGPPLWWLLRVADWAAAVPGASVPVPSGWAGVGLVAAGGIALVVLWRWRWV CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLAAGAAVLGLVAWSASGHAALGGVGGA HHHHHHHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure SGANVTIVCGAVLLSAAVLGPRAAVTLAALALITFVVVVQPSASVLRAAVMGAITLLAL CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VTHRRRQAIPALAASVLLLLIVAPELAVDAGFALSVAATAGLVVIAPVWSRRLTGRGWPK HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCEEEEECHHHHHCCCCCCCC PVADAVGVAMAAQLVTAPLVAGISGRVSLVSVLANIVVAPVIPPITVIGTAAAALCWLWP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC AGAGLLIRFTGPPLWWLLRVADWAAAVPGASVPVPSGWAGVGLVAAGGIALVVLWRWRWV CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLAAGAAVLGLVAWSASGHAALGGVGGA HHHHHHHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA