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The map label for this gene is 108800477

Identifier: 108800477

GI number: 108800477

Start: 3737834

End: 3738796

Strand: Reverse

Name: 108800477

Synonym: Mmcs_3511

Alternate gene names: NA

Gene position: 3738796-3737834 (Counterclockwise)

Preceding gene: 108800478

Following gene: 108800475

Centisome position: 65.53

GC content: 71.24

Gene sequence:

>963_bases
GTGAGCCAACAGGTCGCAGCCCTACATCTGGTCTTGGGGGACGAGGAACTGCTCGTCGAACGCGCGGTGGCGGCGGTGCT
GAAGAGTGCGCGCAAGCTCGCCGGCACCGACGACGTCCCGGTCGACCGGTTACGCGCCGGAGAGGTGAGCACCAGCGAAC
TCGCCGAACTGCTCAGCCCGTCGCTGTTCTCCGACGAGCGGGTGGTGGTGCTCGAATCGGCCGCCGAGGCCGGTAAGGAC
GCGGTCGCGCTGATCGCAGGAGCGGCGGCCGATCTGCCGCCGGGCACCATGCTCGTCGTCGTGCACTCCGGCGGCGGCCG
GGCCAAGGCGCTGGCCGATCAGCTCAAGAAGCTCGGCGCCGAGGTGCATCCGTGCGCCAAGATCGCCAAGGCCGCCGACC
GGGCGGATTTCGTGCGCAGGGAGTTCCGCAGCCACAAGGTCAAGGTCACCGACGACACCGTCACCGCGGTGCTCGACGCG
GTCGGTTCCGACATCCGCGAGCTGGCCGCGGCGTGCTCGCAGCTGGTGGCCGACACCGCGGGTGAGGTCACCGCGGTCGC
CGTGCGTCGGTACCACTCCGGCAAGGCGGAGGTGAAGGGGTTCGACATCGCCGACAAGGCCGTGACCGGCGACGTCGCCG
GGGCCGCCGAGGCGCTGCGATGGGCGATGCTCAGCGGCGAACCGCAGGTGGTGCTGGCCGATGCGCTGGCCGAGGCGGTG
CACACCATCGCGCGCGTCGCGCCACTGTCGGGCGATCCCTACCGGCTGGCGGGTGAACTGGGCATGCCGCCGTGGCGGGT
GCAGAAGGCGCAGAAGCAGGCGCGGCGCTGGTCGCGGGCGTCGGTGGCGGAGGCCATGCGGCTGGTCGCGGCACTCAACG
CAGACGTCAAGGGCGCAGCGGCAGATGCCGACTACGCCCTTGAATCAGCGGTGCGCAGAGTCGCCGAACTCGTGGCCGAC
TAG

Upstream 100 bases:

>100_bases
GCGGCTGGCCGCCGGTGCGGCGGTGCTGGGTCTGGTGGCGTGGTCGGCGTCCGGCCACGCCGCGCTCGGCGGTGTCGGCG
GCGCGTGACACGATCGTCGG

Downstream 100 bases:

>100_bases
CGAGCGCGGGGAACGCTCAGAGCTTGTTCAGCGCGACCGAGAGCGCCGACTTCTTGTTGGCGGCCTGGTTCTTGTGGATG
ACGCCCTTGCTGGCGGCCTT

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III; DNA Polymerase III Delta; DNA Polymerase III Delta Subunit HolA; DNA Polymerase III Subunit Delta-Like Protein; LOW QUALITY PROTEIN DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSQQVAALHLVLGDEELLVERAVAAVLKSARKLAGTDDVPVDRLRAGEVSTSELAELLSPSLFSDERVVVLESAAEAGKD
AVALIAGAAADLPPGTMLVVVHSGGGRAKALADQLKKLGAEVHPCAKIAKAADRADFVRREFRSHKVKVTDDTVTAVLDA
VGSDIRELAAACSQLVADTAGEVTAVAVRRYHSGKAEVKGFDIADKAVTGDVAGAAEALRWAMLSGEPQVVLADALAEAV
HTIARVAPLSGDPYRLAGELGMPPWRVQKAQKQARRWSRASVAEAMRLVAALNADVKGAAADADYALESAVRRVAELVAD

Sequences:

>Translated_320_residues
MSQQVAALHLVLGDEELLVERAVAAVLKSARKLAGTDDVPVDRLRAGEVSTSELAELLSPSLFSDERVVVLESAAEAGKD
AVALIAGAAADLPPGTMLVVVHSGGGRAKALADQLKKLGAEVHPCAKIAKAADRADFVRREFRSHKVKVTDDTVTAVLDA
VGSDIRELAAACSQLVADTAGEVTAVAVRRYHSGKAEVKGFDIADKAVTGDVAGAAEALRWAMLSGEPQVVLADALAEAV
HTIARVAPLSGDPYRLAGELGMPPWRVQKAQKQARRWSRASVAEAMRLVAALNADVKGAAADADYALESAVRRVAELVAD
>Mature_319_residues
SQQVAALHLVLGDEELLVERAVAAVLKSARKLAGTDDVPVDRLRAGEVSTSELAELLSPSLFSDERVVVLESAAEAGKDA
VALIAGAAADLPPGTMLVVVHSGGGRAKALADQLKKLGAEVHPCAKIAKAADRADFVRREFRSHKVKVTDDTVTAVLDAV
GSDIRELAAACSQLVADTAGEVTAVAVRRYHSGKAEVKGFDIADKAVTGDVAGAAEALRWAMLSGEPQVVLADALAEAVH
TIARVAPLSGDPYRLAGELGMPPWRVQKAQKQARRWSRASVAEAMRLVAALNADVKGAAADADYALESAVRRVAELVAD

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 33371; Mature: 33240

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQVAALHLVLGDEELLVERAVAAVLKSARKLAGTDDVPVDRLRAGEVSTSELAELLSP
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCC
SLFSDERVVVLESAAEAGKDAVALIAGAAADLPPGTMLVVVHSGGGRAKALADQLKKLGA
CCCCCCCEEEEECHHHCCCCHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
EVHPCAKIAKAADRADFVRREFRSHKVKVTDDTVTAVLDAVGSDIRELAAACSQLVADTA
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEVTAVAVRRYHSGKAEVKGFDIADKAVTGDVAGAAEALRWAMLSGEPQVVLADALAEAV
CCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
HTIARVAPLSGDPYRLAGELGMPPWRVQKAQKQARRWSRASVAEAMRLVAALNADVKGAA
HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ADADYALESAVRRVAELVAD
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQQVAALHLVLGDEELLVERAVAAVLKSARKLAGTDDVPVDRLRAGEVSTSELAELLSP
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCC
SLFSDERVVVLESAAEAGKDAVALIAGAAADLPPGTMLVVVHSGGGRAKALADQLKKLGA
CCCCCCCEEEEECHHHCCCCHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
EVHPCAKIAKAADRADFVRREFRSHKVKVTDDTVTAVLDAVGSDIRELAAACSQLVADTA
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEVTAVAVRRYHSGKAEVKGFDIADKAVTGDVAGAAEALRWAMLSGEPQVVLADALAEAV
CCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
HTIARVAPLSGDPYRLAGELGMPPWRVQKAQKQARRWSRASVAEAMRLVAALNADVKGAA
HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ADADYALESAVRRVAELVAD
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA