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The map label for this gene is recO

Identifier: 108800416

GI number: 108800416

Start: 3660818

End: 3661648

Strand: Reverse

Name: recO

Synonym: Mmcs_3450

Alternate gene names: 108800416

Gene position: 3661648-3660818 (Counterclockwise)

Preceding gene: 108800418

Following gene: 108800415

Centisome position: 64.18

GC content: 72.2

Gene sequence:

>831_bases
ATGCGGCTGTACCGGGACCGCGCGGTCGTGCTGCGCCAACACAAGCTGGGTGAAGCCGACCGGATCGTCACCCTGCTGAC
CCGCGACCACGGGCTGGTCCGTGCGGTCGCCAAGGGGGTGCGCCGTACCCGCAGCAAGTTCGGCGCGCGGCTGGAACCGT
TCGCCCACATCGACGTCCAGCTGCACCCCGGCCGCAACCTCGACATCGTCACCCAGGTGCAGGCGATCGACGCGTTCGCC
TCCGACATCGTCAGCGACTACGGCCGCTACACGTCGGCGTGCGCGGTGCTCGAGACGGCCGAACGCCTCGCCGGTGAGGA
GCGCGCCCCGATGCCCGCGCTGCACCGGCTGACCGTGGGTGCGCTGCGCGCGGTCGCCGACGGCAGCCGCCCTCGGGAAC
TGGTGTTGGATGCGTACCTGTTGCGCGCCATGGGAATCGCGGGCTGGGCGCCGGCGCTGACCGAATGCGCCCGCTGCGCC
ACCCCCGGCCCGCACCGGGCGTTCCACGTCGCGGCGGGTGGCAGCGTGTGCGTGCACTGCCGGCCGTCGGGATCGGTGAC
CCCGCCGCAGGCCGTGCTGGACCTGATGTCCGCGCTGCACGACGGCGACTGGCCGGCCGCCGAGGCGTCGACACCGTCGC
ACCGCAGCCAGGCCAGTGGGCTGGTGGCCGCCCATCTGCAGTGGCACCTGGAGCGACAGCTGCGCACATTGCCGCTGGTG
GAGCGCGTCTACCGGGTCGATCATGCGGTCGCTGATCACCGGATTTCGCTGTTGCGGCAGGATGTGCACCGTGGTGACGA
ACCGGGTGACCAGCTCGCGGCGGGGAGCTGA

Upstream 100 bases:

>100_bases
CGGTTCGAGCGGGGCGGGGAGCAGACGAATCGGCCATCGGTTCCAACCATATCGGCGCTGCCAACCGAGCATTGTCGGAC
CGTGATGGAACACTGGTCTG

Downstream 100 bases:

>100_bases
GCGCAAGAAGTCGCAGTTCCCGCAGCTCGACCCACCTGCCGACGACTATCCGACCTTCCCCGACAAGTCGACGTGGCCGG
TGGTGTTCCCCGAGCTGCCG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQLHPGRNLDIVTQVQAIDAFA
SDIVSDYGRYTSACAVLETAERLAGEERAPMPALHRLTVGALRAVADGSRPRELVLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHVAAGGSVCVHCRPSGSVTPPQAVLDLMSALHDGDWPAAEASTPSHRSQASGLVAAHLQWHLERQLRTLPLV
ERVYRVDHAVADHRISLLRQDVHRGDEPGDQLAAGS

Sequences:

>Translated_276_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQLHPGRNLDIVTQVQAIDAFA
SDIVSDYGRYTSACAVLETAERLAGEERAPMPALHRLTVGALRAVADGSRPRELVLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHVAAGGSVCVHCRPSGSVTPPQAVLDLMSALHDGDWPAAEASTPSHRSQASGLVAAHLQWHLERQLRTLPLV
ERVYRVDHAVADHRISLLRQDVHRGDEPGDQLAAGS
>Mature_276_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQLHPGRNLDIVTQVQAIDAFA
SDIVSDYGRYTSACAVLETAERLAGEERAPMPALHRLTVGALRAVADGSRPRELVLDAYLLRAMGIAGWAPALTECARCA
TPGPHRAFHVAAGGSVCVHCRPSGSVTPPQAVLDLMSALHDGDWPAAEASTPSHRSQASGLVAAHLQWHLERQLRTLPLV
ERVYRVDHAVADHRISLLRQDVHRGDEPGDQLAAGS

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_MYCSJ (A3Q262)

Other databases:

- EMBL:   CP000580
- RefSeq:   YP_001071730.1
- ProteinModelPortal:   A3Q262
- SMR:   A3Q262
- STRING:   A3Q262
- EnsemblBacteria:   EBMYCT00000050704
- GeneID:   4879173
- GenomeReviews:   CP000580_GR
- KEGG:   mjl:Mjls_3461
- eggNOG:   COG1381
- GeneTree:   EBGT00050000016913
- HOGENOM:   HBG634481
- OMA:   WHLERGL
- ProtClustDB:   PRK00085
- BioCyc:   MSP164757:MJLS_3461-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 30061; Mature: 30061

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ
CCCCHHHHHHHHHHCCCCHHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
LHPGRNLDIVTQVQAIDAFASDIVSDYGRYTSACAVLETAERLAGEERAPMPALHRLTVG
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ALRAVADGSRPRELVLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVAAGGSVCVHC
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEE
RPSGSVTPPQAVLDLMSALHDGDWPAAEASTPSHRSQASGLVAAHLQWHLERQLRTLPLV
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
ERVYRVDHAVADHRISLLRQDVHRGDEPGDQLAAGS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ
CCCCHHHHHHHHHHCCCCHHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
LHPGRNLDIVTQVQAIDAFASDIVSDYGRYTSACAVLETAERLAGEERAPMPALHRLTVG
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ALRAVADGSRPRELVLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVAAGGSVCVHC
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEE
RPSGSVTPPQAVLDLMSALHDGDWPAAEASTPSHRSQASGLVAAHLQWHLERQLRTLPLV
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
ERVYRVDHAVADHRISLLRQDVHRGDEPGDQLAAGS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA