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The map label for this gene is vhuG [H]

Identifier: 108800383

GI number: 108800383

Start: 3626838

End: 3627596

Strand: Reverse

Name: vhuG [H]

Synonym: Mmcs_3417

Alternate gene names: 108800383

Gene position: 3627596-3626838 (Counterclockwise)

Preceding gene: 108800384

Following gene: 108800382

Centisome position: 63.58

GC content: 68.38

Gene sequence:

>759_bases
ATGAGCCCACCCACGCTGGGGGTCTGGAAGTTCGCCTCGTGCGACGGCTGTCAGCTGACCCTGCTCGATTGTGAGGACGA
ACTGCTCACCCTCGCCGGTCAGGTGCAGATCGCCACCTTCCTCGAGGCGTCGAGCGCGATCCTGGGTGGTCCCTACGACG
TGTCGCTGGTCGAGGGTTCGATCACCACCGCGGCGGATGAACGGCGCATCAAGGAGATTCGCGAGCAGTCGAGGGTGCTG
GTGACCATCGGCGCTTGTGCGACCGCCGGCGGAGTCCAGGCCCTGCGCAACTTCGCCGACGTCGACGAGTTCGCCTCGGT
CGTCTACGCCCGGCCCGACTACATCGACACGTTGGCGACCTCCACCCCGGCGGCGGCCCACGTCGAGGTCGACTATCAGC
TGCAGGGCTGCCCGATCGACCGTGGCCAGTTGCTCGAGACCCTGGCCGCGCTGCTGGTGGGGCGCAAACCGCGGCTGCCG
GCCAAGACGGTGTGCACCGAATGCAAACTCCGCGGGGTGACGTGCGTGATGGTCGCCGAGGGCGTGCCCTGCCTCGGGCC
GGTGACGCACGCCGGTTGCGGTGCACTGTGTCCGACGTATCACCGCGGGTGCTACGGGTGTTTCGGTCCCGCGGCGACGC
CGAACACCGCCGCGCTCATCCCGGTGCTGCGCCGTGACGGGATGTCGGGCGGTGACGTCGACCGGGTGTTCTCGACGTTC
AACGTCGCGAAGTTCGCCGAGCACCGGGACGATACGTGA

Upstream 100 bases:

>100_bases
GTGCGGGCACTGCCAACTCGGCCCGCTACTGCTGTGCCGCGACGGGCCCGTGGTGGGTTACGACGTCGCCGAGCCACTGC
TGCAGGTCGAGGAGCTGTAG

Downstream 100 bases:

>100_bases
ATCCCGAGATCCGCACCCTGACTGTCGGCGCGCTGACCCGTGTGGAAGGTGAAGGGGCGCTGCACGTCACGTTGACCGAC
GGCGTGGTGGAAAGCGTCGA

Product: NADH ubiquinone oxidoreductase, 20 kDa subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSPPTLGVWKFASCDGCQLTLLDCEDELLTLAGQVQIATFLEASSAILGGPYDVSLVEGSITTAADERRIKEIREQSRVL
VTIGACATAGGVQALRNFADVDEFASVVYARPDYIDTLATSTPAAAHVEVDYQLQGCPIDRGQLLETLAALLVGRKPRLP
AKTVCTECKLRGVTCVMVAEGVPCLGPVTHAGCGALCPTYHRGCYGCFGPAATPNTAALIPVLRRDGMSGGDVDRVFSTF
NVAKFAEHRDDT

Sequences:

>Translated_252_residues
MSPPTLGVWKFASCDGCQLTLLDCEDELLTLAGQVQIATFLEASSAILGGPYDVSLVEGSITTAADERRIKEIREQSRVL
VTIGACATAGGVQALRNFADVDEFASVVYARPDYIDTLATSTPAAAHVEVDYQLQGCPIDRGQLLETLAALLVGRKPRLP
AKTVCTECKLRGVTCVMVAEGVPCLGPVTHAGCGALCPTYHRGCYGCFGPAATPNTAALIPVLRRDGMSGGDVDRVFSTF
NVAKFAEHRDDT
>Mature_251_residues
SPPTLGVWKFASCDGCQLTLLDCEDELLTLAGQVQIATFLEASSAILGGPYDVSLVEGSITTAADERRIKEIREQSRVLV
TIGACATAGGVQALRNFADVDEFASVVYARPDYIDTLATSTPAAAHVEVDYQLQGCPIDRGQLLETLAALLVGRKPRLPA
KTVCTECKLRGVTCVMVAEGVPCLGPVTHAGCGALCPTYHRGCYGCFGPAATPNTAALIPVLRRDGMSGGDVDRVFSTFN
VAKFAEHRDDT

Specific function: Unknown

COG id: COG1941

COG function: function code C; Coenzyme F420-reducing hydrogenase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: NA

Molecular weight: Translated: 26656; Mature: 26525

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPTLGVWKFASCDGCQLTLLDCEDELLTLAGQVQIATFLEASSAILGGPYDVSLVEGS
CCCCCCCEEEECCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCC
ITTAADERRIKEIREQSRVLVTIGACATAGGVQALRNFADVDEFASVVYARPDYIDTLAT
CCCHHHHHHHHHHHHCCCEEEEEECHHCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHC
STPAAAHVEVDYQLQGCPIDRGQLLETLAALLVGRKPRLPAKTVCTECKLRGVTCVMVAE
CCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEEC
GVPCLGPVTHAGCGALCPTYHRGCYGCFGPAATPNTAALIPVLRRDGMSGGDVDRVFSTF
CCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
NVAKFAEHRDDT
HHHHHHHHCCCC
>Mature Secondary Structure 
SPPTLGVWKFASCDGCQLTLLDCEDELLTLAGQVQIATFLEASSAILGGPYDVSLVEGS
CCCCCCEEEECCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCC
ITTAADERRIKEIREQSRVLVTIGACATAGGVQALRNFADVDEFASVVYARPDYIDTLAT
CCCHHHHHHHHHHHHCCCEEEEEECHHCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHC
STPAAAHVEVDYQLQGCPIDRGQLLETLAALLVGRKPRLPAKTVCTECKLRGVTCVMVAE
CCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEEC
GVPCLGPVTHAGCGALCPTYHRGCYGCFGPAATPNTAALIPVLRRDGMSGGDVDRVFSTF
CCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
NVAKFAEHRDDT
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]