| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800362
Identifier: 108800362
GI number: 108800362
Start: 3598265
End: 3599167
Strand: Reverse
Name: 108800362
Synonym: Mmcs_3396
Alternate gene names: NA
Gene position: 3599167-3598265 (Counterclockwise)
Preceding gene: 108800363
Following gene: 108800356
Centisome position: 63.08
GC content: 66.22
Gene sequence:
>903_bases GTGCTGATCGCGTTCGGCGACACCTTCGGCAACTGCAGCCTGCAGGACCAGGAGTGGCGGAAGAACACCCTTTTCCGCAG CGCGACCACCGACCTCTCCAACGGGATGACGGTCACCGACCCGGTGCCCGGCGACAGGTTCGGTGGCTCACCGGTCAACG CCGACCGGCCGAGCTTCTCCCGGCAGGTGATCCAGAGCCTCAACCTGGCCGCCACCGAGGTAACTGTCATCCCCACGGCC GGGATCTCGGTCGGCACCCGGCAATACGTCAACTTCATGTCGGTCAGCCAGTGGGGCGCCCCCGGACAGTGGTCGACGAA CTTCTCGGCCGTCGCGGTCTCCGACGACAACGGCGAGACGTGGACGGTGCCACGCACCAGCATCCGGCCCAGTTGGTTCA ACACCGTGCCCGGCGTGCAGTTCGTCTGGGGCGACCAGAACTTCCAGATGGGTGCGTACCTGCGGTACAAGGGTTACGTC TACGCCTACGGCACGGGGGCCGGCCGCGGCGGTATGCCGTTCCTGTCCCGCGTCAACGAGAACGCCGTGGCCGACAAATC CGCCTACGAGTACTACACGCCCTTCGGCTGGCTGCGCGGCTTCCCGTTCCTGGCGGTCCAGGTGGTGTGGGCGCCGGGCA GCGAGATGTCGGTGGCGTGGAACGACCACCTGAACAAGTTCGTGATGCTCTACACCAACACGGTGAGCGATGTGGTGATG CGCACCGCCGACAAACCCGAGGGGCCGTGGAGTTCGGCGAAGACGGTCGTCACCTCGGCCGCGGTGCCGGGCGGTATCTA CGCCCCGTACATCCACCCGTGGTCGAAGGGCCGCGACCTGTACTTCACGCTGTCACGCTGGTCGGACTACAGCACGCTGC TCATGCACACGTCTCTGGGCTAG
Upstream 100 bases:
>100_bases GATCGCCGGCCCGAACTCGTCGTCCTACCCGCGGTTCGGCATCTCCGGTGCCGACCTCGGCATCCTGTGGGACAACGGGA ACTCCGGTGCGCAGCGCCAG
Downstream 100 bases:
>100_bases ACGTGCACATCCCGCAGGCCGACCGCGTTCCGCAGCCCTGAGCAGTTGTAACACCCCACGCAGCCAACACAATTCGAGCA CCGGGCGCAGCCGAGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MLIAFGDTFGNCSLQDQEWRKNTLFRSATTDLSNGMTVTDPVPGDRFGGSPVNADRPSFSRQVIQSLNLAATEVTVIPTA GISVGTRQYVNFMSVSQWGAPGQWSTNFSAVAVSDDNGETWTVPRTSIRPSWFNTVPGVQFVWGDQNFQMGAYLRYKGYV YAYGTGAGRGGMPFLSRVNENAVADKSAYEYYTPFGWLRGFPFLAVQVVWAPGSEMSVAWNDHLNKFVMLYTNTVSDVVM RTADKPEGPWSSAKTVVTSAAVPGGIYAPYIHPWSKGRDLYFTLSRWSDYSTLLMHTSLG
Sequences:
>Translated_300_residues MLIAFGDTFGNCSLQDQEWRKNTLFRSATTDLSNGMTVTDPVPGDRFGGSPVNADRPSFSRQVIQSLNLAATEVTVIPTA GISVGTRQYVNFMSVSQWGAPGQWSTNFSAVAVSDDNGETWTVPRTSIRPSWFNTVPGVQFVWGDQNFQMGAYLRYKGYV YAYGTGAGRGGMPFLSRVNENAVADKSAYEYYTPFGWLRGFPFLAVQVVWAPGSEMSVAWNDHLNKFVMLYTNTVSDVVM RTADKPEGPWSSAKTVVTSAAVPGGIYAPYIHPWSKGRDLYFTLSRWSDYSTLLMHTSLG >Mature_300_residues MLIAFGDTFGNCSLQDQEWRKNTLFRSATTDLSNGMTVTDPVPGDRFGGSPVNADRPSFSRQVIQSLNLAATEVTVIPTA GISVGTRQYVNFMSVSQWGAPGQWSTNFSAVAVSDDNGETWTVPRTSIRPSWFNTVPGVQFVWGDQNFQMGAYLRYKGYV YAYGTGAGRGGMPFLSRVNENAVADKSAYEYYTPFGWLRGFPFLAVQVVWAPGSEMSVAWNDHLNKFVMLYTNTVSDVVM RTADKPEGPWSSAKTVVTSAAVPGGIYAPYIHPWSKGRDLYFTLSRWSDYSTLLMHTSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33115; Mature: 33115
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIAFGDTFGNCSLQDQEWRKNTLFRSATTDLSNGMTVTDPVPGDRFGGSPVNADRPSFS CEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCEEECCCCCCCCCCCCCCCCCCHHH RQVIQSLNLAATEVTVIPTAGISVGTRQYVNFMSVSQWGAPGQWSTNFSAVAVSDDNGET HHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCE WTVPRTSIRPSWFNTVPGVQFVWGDQNFQMGAYLRYKGYVYAYGTGAGRGGMPFLSRVNE EECCCCCCCCCHHCCCCCCEEEECCCCCEECEEEEECCEEEEEECCCCCCCCHHHHHCCC NAVADKSAYEYYTPFGWLRGFPFLAVQVVWAPGSEMSVAWNDHLNKFVMLYTNTVSDVVM CCCCCCCCCEEECCHHHHHCCCEEEEEEEECCCCCEEEEECCCCCEEEEEEECCHHHHHH RTADKPEGPWSSAKTVVTSAAVPGGIYAPYIHPWSKGRDLYFTLSRWSDYSTLLMHTSLG HCCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC >Mature Secondary Structure MLIAFGDTFGNCSLQDQEWRKNTLFRSATTDLSNGMTVTDPVPGDRFGGSPVNADRPSFS CEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCEEECCCCCCCCCCCCCCCCCCHHH RQVIQSLNLAATEVTVIPTAGISVGTRQYVNFMSVSQWGAPGQWSTNFSAVAVSDDNGET HHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCE WTVPRTSIRPSWFNTVPGVQFVWGDQNFQMGAYLRYKGYVYAYGTGAGRGGMPFLSRVNE EECCCCCCCCCHHCCCCCCEEEECCCCCEECEEEEECCEEEEEECCCCCCCCHHHHHCCC NAVADKSAYEYYTPFGWLRGFPFLAVQVVWAPGSEMSVAWNDHLNKFVMLYTNTVSDVVM CCCCCCCCCEEECCHHHHHCCCEEEEEEEECCCCCEEEEECCCCCEEEEEEECCHHHHHH RTADKPEGPWSSAKTVVTSAAVPGGIYAPYIHPWSKGRDLYFTLSRWSDYSTLLMHTSLG HCCCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA