| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800356
Identifier: 108800356
GI number: 108800356
Start: 3591483
End: 3592016
Strand: Reverse
Name: 108800356
Synonym: Mmcs_3390
Alternate gene names: NA
Gene position: 3592016-3591483 (Counterclockwise)
Preceding gene: 108800362
Following gene: 108800354
Centisome position: 62.96
GC content: 66.67
Gene sequence:
>534_bases ATGACCACCATCTCGCGAGTGATCGCCGCCGTCGTCCTGGCGCTCGGGGTCGCCGTCGGCGCGGCCGGACCGGCGCAGGC CGAGCAGCAGGTGCTGCAGGGGATCTACACCTACACCCAGGCCGACGGTCTGAGCGGTGAGTGGACGATCTTCCCGTCGT GTGTCCCCACCGTGGGGGACCTGCGCGAACCGCTGTACCTACCGGTGGCCTGCCGGCTGCACGTGACGTCGTTCGAGGGC GTCCAGGGTGGGGACGCGGTGCTCACCAACGGTGTGTGGGCCTACGACACCACGATCGCCGACGGAATCACCTGCTCCGA CGGCAGTCCACTGCAGGTCGTCGAGATCTACGAGTTCAACACCGAAACCATGTCCGGCACGCGCACCAACACCCACGCGC CGGGTTGCAACGGCGAACTGCCCGCCACGATGATCAAGACGCCGTTCAGTTTGGCGTACAAGACTGAACTGCCGATCCCG GTCGACAAGTACCCGCTGATCTGTGAGCCGGGCGGCCTGCGGCGCTGCTTCTAG
Upstream 100 bases:
>100_bases TCGGGCACCTCCCCGCTTCTTACCCCACGCGGTCGTCCCCGCAAACGCCGAAGCGGTGAACCGGTGACTTCACGGGAGGC CGACTGCCATACTGACCCCG
Downstream 100 bases:
>100_bases ATCTCTGCGGGCCGCTCAGGCGGTGAACCCGCCGTCGACTGTCCAGTTGGCGCCGGTCACGTAGCCGGCGTCGGGGCCGG CCAGGTAGCTCGCCACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTTISRVIAAVVLALGVAVGAAGPAQAEQQVLQGIYTYTQADGLSGEWTIFPSCVPTVGDLREPLYLPVACRLHVTSFEG VQGGDAVLTNGVWAYDTTIADGITCSDGSPLQVVEIYEFNTETMSGTRTNTHAPGCNGELPATMIKTPFSLAYKTELPIP VDKYPLICEPGGLRRCF
Sequences:
>Translated_177_residues MTTISRVIAAVVLALGVAVGAAGPAQAEQQVLQGIYTYTQADGLSGEWTIFPSCVPTVGDLREPLYLPVACRLHVTSFEG VQGGDAVLTNGVWAYDTTIADGITCSDGSPLQVVEIYEFNTETMSGTRTNTHAPGCNGELPATMIKTPFSLAYKTELPIP VDKYPLICEPGGLRRCF >Mature_176_residues TTISRVIAAVVLALGVAVGAAGPAQAEQQVLQGIYTYTQADGLSGEWTIFPSCVPTVGDLREPLYLPVACRLHVTSFEGV QGGDAVLTNGVWAYDTTIADGITCSDGSPLQVVEIYEFNTETMSGTRTNTHAPGCNGELPATMIKTPFSLAYKTELPIPV DKYPLICEPGGLRRCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18787; Mature: 18655
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTISRVIAAVVLALGVAVGAAGPAQAEQQVLQGIYTYTQADGLSGEWTIFPSCVPTVGD CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHH LREPLYLPVACRLHVTSFEGVQGGDAVLTNGVWAYDTTIADGITCSDGSPLQVVEIYEFN HCCCEEEEEEEEEEEEECCCCCCCCEEEECCEEEECCCCCCCEEECCCCCEEEEEEEECC TETMSGTRTNTHAPGCNGELPATMIKTPFSLAYKTELPIPVDKYPLICEPGGLRRCF CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure TTISRVIAAVVLALGVAVGAAGPAQAEQQVLQGIYTYTQADGLSGEWTIFPSCVPTVGD CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHH LREPLYLPVACRLHVTSFEGVQGGDAVLTNGVWAYDTTIADGITCSDGSPLQVVEIYEFN HCCCEEEEEEEEEEEEECCCCCCCCEEEECCEEEECCCCCCCEEECCCCCEEEEEEEECC TETMSGTRTNTHAPGCNGELPATMIKTPFSLAYKTELPIPVDKYPLICEPGGLRRCF CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA