| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800354
Identifier: 108800354
GI number: 108800354
Start: 3589830
End: 3590666
Strand: Reverse
Name: 108800354
Synonym: Mmcs_3388
Alternate gene names: NA
Gene position: 3590666-3589830 (Counterclockwise)
Preceding gene: 108800356
Following gene: 108800353
Centisome position: 62.93
GC content: 67.5
Gene sequence:
>837_bases ATGACCAAACGGATCGTCGTGTGGGGCACCGGCTTCGTCGGCAAGATGGTGATCGCCGAGATCGACCGGCATCCGCTCTT CGAGCTCGTCGGCGTCGGGGTGAGCAACCCGGCCAAGGTCGGACGCGACGCGGGGGAGATCTGCGGGCTCGGCCACCCGA TCGGCGTGACCGCCACCGACGACGTCGACGCGCTCATCGCGCTCGACCCCGACGCCCTGGTGCACTTCGGGCCCACCGCC GCACATGCCGACGCCAACATCGCGGTGATCACCCGCTTCCTGCGCGCGGGTATCGACGTGTGCTCGACGGCGATGACGCC GTGGGTGTGGCCCACCATGCACCTCAACCCGCCCGAGTGGATCATGCCGGTGACCGAGGCGTGCGAACTCGGTGAATCGT CGTGTTTCACCACCGGCATCGACCCCGGTTTCGCCAACGACCTGTTCCCCATGACGCTGATGGGTGTGTGCTCAGAGGTC AAGCGCGTCCGCGCGGCCGAACTGCTCGACTACACCAACTACACCGGCGACTACGAGAACGAGATGGGCATCGGCAGGCC ACCCGGGCACCGCGCGCTGCTCGAAACCCCCGACATCCTCGTATTCGCTTGGGGGGCAACGGTTCCGATGATCGCTCAGG CGGCGGGCATCATGCTCGACGAGATCACCACCACCTACGACAAGTGGGTCACGCCGACGGAGCGCACGAGCGCCAAGGGC GTCATCGAGGCGGGCAGCGTCGCCGCGGTCCGGTTCACCATCAACGGCGTCTACCGCGGCGAGACCCGCATCCAGCTCGA ACACGTCAACCGCATCGGCGCCGACGGCCGCACCTGA
Upstream 100 bases:
>100_bases CGCCGGTCACCAGCGCCCGCCGACCGGCCAGTCTCTGTTCCACCGCAGCCGTCATGGTCTCACCCTATGGTGAACACATC CCGACGGAAGGCAAGAGCGC
Downstream 100 bases:
>100_bases CTGGCCGTCGGGAACGCAGAACGACGTCTACCGCGTCGAGATCGACGGCACGCCGAGCATCGTGCAGGAGACCGCGTTCC GCTTCACCGACGGCTCCGGA
Product: dihydrodipicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Dihydropicolinate Reductase
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTKRIVVWGTGFVGKMVIAEIDRHPLFELVGVGVSNPAKVGRDAGEICGLGHPIGVTATDDVDALIALDPDALVHFGPTA AHADANIAVITRFLRAGIDVCSTAMTPWVWPTMHLNPPEWIMPVTEACELGESSCFTTGIDPGFANDLFPMTLMGVCSEV KRVRAAELLDYTNYTGDYENEMGIGRPPGHRALLETPDILVFAWGATVPMIAQAAGIMLDEITTTYDKWVTPTERTSAKG VIEAGSVAAVRFTINGVYRGETRIQLEHVNRIGADGRT
Sequences:
>Translated_278_residues MTKRIVVWGTGFVGKMVIAEIDRHPLFELVGVGVSNPAKVGRDAGEICGLGHPIGVTATDDVDALIALDPDALVHFGPTA AHADANIAVITRFLRAGIDVCSTAMTPWVWPTMHLNPPEWIMPVTEACELGESSCFTTGIDPGFANDLFPMTLMGVCSEV KRVRAAELLDYTNYTGDYENEMGIGRPPGHRALLETPDILVFAWGATVPMIAQAAGIMLDEITTTYDKWVTPTERTSAKG VIEAGSVAAVRFTINGVYRGETRIQLEHVNRIGADGRT >Mature_277_residues TKRIVVWGTGFVGKMVIAEIDRHPLFELVGVGVSNPAKVGRDAGEICGLGHPIGVTATDDVDALIALDPDALVHFGPTAA HADANIAVITRFLRAGIDVCSTAMTPWVWPTMHLNPPEWIMPVTEACELGESSCFTTGIDPGFANDLFPMTLMGVCSEVK RVRAAELLDYTNYTGDYENEMGIGRPPGHRALLETPDILVFAWGATVPMIAQAAGIMLDEITTTYDKWVTPTERTSAKGV IEAGSVAAVRFTINGVYRGETRIQLEHVNRIGADGRT
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29922; Mature: 29790
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRIVVWGTGFVGKMVIAEIDRHPLFELVGVGVSNPAKVGRDAGEICGLGHPIGVTATD CCCEEEEEECCHHHHHHHHHCCCCHHHHHHCCCCCCHHHHCCCCHHHCCCCCCCCCEECC DVDALIALDPDALVHFGPTAAHADANIAVITRFLRAGIDVCSTAMTPWVWPTMHLNPPEW CCCEEEEECCCCEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHH IMPVTEACELGESSCFTTGIDPGFANDLFPMTLMGVCSEVKRVRAAELLDYTNYTGDYEN HCCHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EMGIGRPPGHRALLETPDILVFAWGATVPMIAQAAGIMLDEITTTYDKWVTPTERTSAKG CCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VIEAGSVAAVRFTINGVYRGETRIQLEHVNRIGADGRT EEECCCEEEEEEEEEEEEECCEEEEEEHHHHCCCCCCC >Mature Secondary Structure TKRIVVWGTGFVGKMVIAEIDRHPLFELVGVGVSNPAKVGRDAGEICGLGHPIGVTATD CCEEEEEECCHHHHHHHHHCCCCHHHHHHCCCCCCHHHHCCCCHHHCCCCCCCCCEECC DVDALIALDPDALVHFGPTAAHADANIAVITRFLRAGIDVCSTAMTPWVWPTMHLNPPEW CCCEEEEECCCCEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHH IMPVTEACELGESSCFTTGIDPGFANDLFPMTLMGVCSEVKRVRAAELLDYTNYTGDYEN HCCHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EMGIGRPPGHRALLETPDILVFAWGATVPMIAQAAGIMLDEITTTYDKWVTPTERTSAKG CCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VIEAGSVAAVRFTINGVYRGETRIQLEHVNRIGADGRT EEECCCEEEEEEEEEEEEECCEEEEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA