| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800321
Identifier: 108800321
GI number: 108800321
Start: 3556687
End: 3557487
Strand: Reverse
Name: 108800321
Synonym: Mmcs_3355
Alternate gene names: NA
Gene position: 3557487-3556687 (Counterclockwise)
Preceding gene: 108800325
Following gene: 108800315
Centisome position: 62.35
GC content: 68.66
Gene sequence:
>801_bases GTGCGGCAAAACCCCCTCCTGGGGCCGGGCGATGTTGTCACACTCGGTGAAGAGTGCAACCGGCAGATCGGGAGATTCGA TATGCGCTACCTGCGAACGGCAGCGTGTCTGGCGGTGGCCGCGGTGGTCGGGTGCGGGGCCCAATCGATGCCGGTGCCAC CGCACGCAGATGCCGACCCGGCGAGCGCTTTCGTGGTCAGCCGGGAGGAGTTCGACCGCGCCTTCCCCGGCCGCATCGGG TTCTACTCGTACGACGACCTGGTGGACGCGCTCCCGTCGTTTCCGGCGTTCGCCACGACCGGTGACGAGACCACACGCCG GCGCGAGGTCGCCGCGTTCTTCGGCAACATCTCGCACGAGACGGGTGGGTTGGAGATCATCGAGGAGAGCCCACAGCGCC GCAGAGTGTACTGCGACGCCGACCTTCCGTTCGGTTGTCCAGCGGGCGAGGACGCCTATTTCGGTCGCGGTCCCGGCCAA CTGAGCTGGAACTACAACTATCGCGCGGCGGGCGATGCGCTCGGGGTCGACCTGCTCACCGAACCCGAGCTCGTCGCGCA GGACGCCCCACTGGCGTGGCGGACCGCGCTGTGGTTCTGGACCACCCAGAAAGCCGCGGCTGCGGCCACCCCGCATGACG CGATGGTGCGCGGCCTCGGATTCGGTGAGACGATCCGGGCGTTCAACGGCGTTCTCGAGTGTGGCGGCGGCAATCCGGCG CAGGTGCAGAGCCGGGTGGACGCCTATCTGCGGATCAGCGCGCTGCTCGGGGTGCCGCCGGGGGAGGACCTCTACTGCTG A
Upstream 100 bases:
>100_bases TCATCGATTATCGGTCCGCGAGCGGGCTGCCGGAAGGTGCCGCGCACCGCATATGTGACGTTATTGTCCCGATCAAACAT CCTGGGCCGCAGGGAAGTCT
Downstream 100 bases:
>100_bases GCCCCGAGGATCGGTGGCATCGGGCGGTGACGTTCGACGAAGGCGCTCACCGTGTTCCTGCGTTCCAACTTGTCCCAGGC CACGATGGTGCCCTTGATGG
Product: chitinase
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Endochitinase; Chitinase IS; Chitinase C; Secreted Chitinase; Chitinase A; Chitinase ChiF; Chitinase Class I; Class I Chitinase
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MRQNPLLGPGDVVTLGEECNRQIGRFDMRYLRTAACLAVAAVVGCGAQSMPVPPHADADPASAFVVSREEFDRAFPGRIG FYSYDDLVDALPSFPAFATTGDETTRRREVAAFFGNISHETGGLEIIEESPQRRRVYCDADLPFGCPAGEDAYFGRGPGQ LSWNYNYRAAGDALGVDLLTEPELVAQDAPLAWRTALWFWTTQKAAAAATPHDAMVRGLGFGETIRAFNGVLECGGGNPA QVQSRVDAYLRISALLGVPPGEDLYC
Sequences:
>Translated_266_residues MRQNPLLGPGDVVTLGEECNRQIGRFDMRYLRTAACLAVAAVVGCGAQSMPVPPHADADPASAFVVSREEFDRAFPGRIG FYSYDDLVDALPSFPAFATTGDETTRRREVAAFFGNISHETGGLEIIEESPQRRRVYCDADLPFGCPAGEDAYFGRGPGQ LSWNYNYRAAGDALGVDLLTEPELVAQDAPLAWRTALWFWTTQKAAAAATPHDAMVRGLGFGETIRAFNGVLECGGGNPA QVQSRVDAYLRISALLGVPPGEDLYC >Mature_266_residues MRQNPLLGPGDVVTLGEECNRQIGRFDMRYLRTAACLAVAAVVGCGAQSMPVPPHADADPASAFVVSREEFDRAFPGRIG FYSYDDLVDALPSFPAFATTGDETTRRREVAAFFGNISHETGGLEIIEESPQRRRVYCDADLPFGCPAGEDAYFGRGPGQ LSWNYNYRAAGDALGVDLLTEPELVAQDAPLAWRTALWFWTTQKAAAAATPHDAMVRGLGFGETIRAFNGVLECGGGNPA QVQSRVDAYLRISALLGVPPGEDLYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28700; Mature: 28700
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQNPLLGPGDVVTLGEECNRQIGRFDMRYLRTAACLAVAAVVGCGAQSMPVPPHADADP CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ASAFVVSREEFDRAFPGRIGFYSYDDLVDALPSFPAFATTGDETTRRREVAAFFGNISHE HHEEEEEHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCCC TGGLEIIEESPQRRRVYCDADLPFGCPAGEDAYFGRGPGQLSWNYNYRAAGDALGVDLLT CCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCC EPELVAQDAPLAWRTALWFWTTQKAAAAATPHDAMVRGLGFGETIRAFNGVLECGGGNPA CCHHHHCCCCCHHHEEEEEEECCHHHHCCCCHHHHHHHCCCCHHHHHHHHEEECCCCCHH QVQSRVDAYLRISALLGVPPGEDLYC HHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRQNPLLGPGDVVTLGEECNRQIGRFDMRYLRTAACLAVAAVVGCGAQSMPVPPHADADP CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ASAFVVSREEFDRAFPGRIGFYSYDDLVDALPSFPAFATTGDETTRRREVAAFFGNISHE HHEEEEEHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCCC TGGLEIIEESPQRRRVYCDADLPFGCPAGEDAYFGRGPGQLSWNYNYRAAGDALGVDLLT CCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCC EPELVAQDAPLAWRTALWFWTTQKAAAAATPHDAMVRGLGFGETIRAFNGVLECGGGNPA CCHHHHCCCCCHHHEEEEEEECCHHHHCCCCHHHHHHHCCCCHHHHHHHHEEECCCCCHH QVQSRVDAYLRISALLGVPPGEDLYC HHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA