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The map label for this gene is yadR [C]

Identifier: 108800268

GI number: 108800268

Start: 3500093

End: 3500455

Strand: Reverse

Name: yadR [C]

Synonym: Mmcs_3302

Alternate gene names: 108800268

Gene position: 3500455-3500093 (Counterclockwise)

Preceding gene: 108800274

Following gene: 108800266

Centisome position: 61.35

GC content: 67.22

Gene sequence:

>363_bases
ATGACTGTTCAGGACGAGTCGGCGACCGCCACCGCAACCCACGGTGTGCTTCTCACCGAAGCCGCGGCCGCCAAGGCGAA
GGCCCTGCTCGACCAGGAGGGCCGGGACGACCTGGCGCTGCGCATCGCCGTGCAGCCGGGCGGCTGCGCGGGCCTGCGCT
ACAACCTGTTCTTCGACGACCGGGCGCTCGACGGCGACCTGACCGCCGAATTCGGTGGCGTCAACCTGACCGTCGACCGG
ATGAGCGCACCTTATGTGCAGGGCGCCACAATCGACTTCGTCGACACCATCGAGAAGCAGGGCTTCACTATCGACAACCC
GAACGCCACCGGCTCGTGCGCCTGCGGCGACTCCTTCAACTGA

Upstream 100 bases:

>100_bases
GAATAGCGCCGAAGCAAGGTACCGTTGAGGTAGTGGACCGTCGACGGGTTTCGTCGGCGCGTTCCCCATGAACCAGCAGC
AGGGATGCAAAGGGAGAGCA

Downstream 100 bases:

>100_bases
TCGGCTAGTACTGGCTGCCGGTGCGCAGCAGATACGAGCAGACCAGCACTTCGTTGTCCCGGATGAGCAGCTGGGCGACC
GCCTGCTCCTCCTCATTGGG

Product: HesB/YadR/YfhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTVQDESATATATHGVLLTEAAAAKAKALLDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRALDGDLTAEFGGVNLTVDR
MSAPYVQGATIDFVDTIEKQGFTIDNPNATGSCACGDSFN

Sequences:

>Translated_120_residues
MTVQDESATATATHGVLLTEAAAAKAKALLDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRALDGDLTAEFGGVNLTVDR
MSAPYVQGATIDFVDTIEKQGFTIDNPNATGSCACGDSFN
>Mature_119_residues
TVQDESATATATHGVLLTEAAAAKAKALLDQEGRDDLALRIAVQPGGCAGLRYNLFFDDRALDGDLTAEFGGVNLTVDRM
SAPYVQGATIDFVDTIEKQGFTIDNPNATGSCACGDSFN

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Escherichia coli, GI1786351, Length=103, Percent_Identity=42.7184466019417, Blast_Score=96, Evalue=7e-22,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=35.2380952380952, Blast_Score=71, Evalue=2e-14,
Organism=Escherichia coli, GI1787974, Length=109, Percent_Identity=35.7798165137615, Blast_Score=61, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71998452, Length=121, Percent_Identity=33.0578512396694, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24642263, Length=105, Percent_Identity=34.2857142857143, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12562; Mature: 12431

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQDESATATATHGVLLTEAAAAKAKALLDQEGRDDLALRIAVQPGGCAGLRYNLFFDD
CCCCCCCCCEEECCCEEEEHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECC
RALDGDLTAEFGGVNLTVDRMSAPYVQGATIDFVDTIEKQGFTIDNPNATGSCACGDSFN
CCCCCCCEEECCCEEEEEECCCCCEECCCEEHHHHHHHHCCCEEECCCCCCEEECCCCCC
>Mature Secondary Structure 
TVQDESATATATHGVLLTEAAAAKAKALLDQEGRDDLALRIAVQPGGCAGLRYNLFFDD
CCCCCCCCEEECCCEEEEHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECC
RALDGDLTAEFGGVNLTVDRMSAPYVQGATIDFVDTIEKQGFTIDNPNATGSCACGDSFN
CCCCCCCEEECCCEEEEEECCCCCEECCCEEHHHHHHHHCCCEEECCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203 [H]