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The map label for this gene is 108800180

Identifier: 108800180

GI number: 108800180

Start: 3406272

End: 3406709

Strand: Reverse

Name: 108800180

Synonym: Mmcs_3214

Alternate gene names: NA

Gene position: 3406709-3406272 (Counterclockwise)

Preceding gene: 108800181

Following gene: 108800179

Centisome position: 59.71

GC content: 66.44

Gene sequence:

>438_bases
ATGACCGCAGCTTCGAGTTCTCTCGACGGTCTGCACGATCCTGAGGCGCTGCCGCCGCTGACCGATGTCAACCGTCCCTA
CTTCGCAGCAGCGGCCCGCGGTGTACTCGTCTTCCAGCGGTGCGCGAACGACCACCCTTTCCTCTACCCGCGGCTGGTGT
GTCCCGTCTGCCATGACGGTGAGTTGGCCTGGGAGACCGCGGCGGGTACTGGTGAGATCGTCAGTTTCGCGCCGGTGTAC
CGCCCCCCGTGGGACTCGTTCCCGCGCAGCGAGCCGTACGTCGTCGTGCTCGTTCGTCTGGACGAGGGGCCGCAGTTGTT
GGCCAGTCTCGAGGGCGTGGCCCCAGATGAAGTTGCGATCGGGGCGAGAGTGCGCGCAGTGTTCGAGCGGGTGAACGAGG
ACCTTGGGCTGGTCCGATTCAGGCTGGCGGCGTCGTGA

Upstream 100 bases:

>100_bases
GCGCCGAGGGCCGTCAGGTGCCCGGGGCGGATACCGCGTTCGTGCACAGCTACGGCTCGATGCTGTGCAGTCACGTCAGC
ATGGTGATGGAGGGAGCGTC

Downstream 100 bases:

>100_bases
CCACGTACGGGGTCTCGGTGCTCGGCGCGGACTTGGCCACCCTTGTCGAGACCGCCGAGGCTACCGACCTCGCCGGCTTC
GACGCCGCCTGGGCCTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTAASSSLDGLHDPEALPPLTDVNRPYFAAAARGVLVFQRCANDHPFLYPRLVCPVCHDGELAWETAAGTGEIVSFAPVY
RPPWDSFPRSEPYVVVLVRLDEGPQLLASLEGVAPDEVAIGARVRAVFERVNEDLGLVRFRLAAS

Sequences:

>Translated_145_residues
MTAASSSLDGLHDPEALPPLTDVNRPYFAAAARGVLVFQRCANDHPFLYPRLVCPVCHDGELAWETAAGTGEIVSFAPVY
RPPWDSFPRSEPYVVVLVRLDEGPQLLASLEGVAPDEVAIGARVRAVFERVNEDLGLVRFRLAAS
>Mature_144_residues
TAASSSLDGLHDPEALPPLTDVNRPYFAAAARGVLVFQRCANDHPFLYPRLVCPVCHDGELAWETAAGTGEIVSFAPVYR
PPWDSFPRSEPYVVVLVRLDEGPQLLASLEGVAPDEVAIGARVRAVFERVNEDLGLVRFRLAAS

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15772; Mature: 15641

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAASSSLDGLHDPEALPPLTDVNRPYFAAAARGVLVFQRCANDHPFLYPRLVCPVCHDG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECHHEECCCCCCC
ELAWETAAGTGEIVSFAPVYRPPWDSFPRSEPYVVVLVRLDEGPQLLASLEGVAPDEVAI
CEEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCHHHH
GARVRAVFERVNEDLGLVRFRLAAS
HHHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure 
TAASSSLDGLHDPEALPPLTDVNRPYFAAAARGVLVFQRCANDHPFLYPRLVCPVCHDG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECHHEECCCCCCC
ELAWETAAGTGEIVSFAPVYRPPWDSFPRSEPYVVVLVRLDEGPQLLASLEGVAPDEVAI
CEEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCHHHH
GARVRAVFERVNEDLGLVRFRLAAS
HHHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA