| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800181
Identifier: 108800181
GI number: 108800181
Start: 3406706
End: 3407872
Strand: Reverse
Name: 108800181
Synonym: Mmcs_3215
Alternate gene names: NA
Gene position: 3407872-3406706 (Counterclockwise)
Preceding gene: 108800182
Following gene: 108800180
Centisome position: 59.73
GC content: 67.18
Gene sequence:
>1167_bases ATGCCACACGACCAGCCGGCCATCATCGGTGCCGCCGAACTCGCTCCAGGGAGAAACGTTCCGTACACCTCCACTGAATT GCATGTGCGCGCCGCGGTCGCGGCTCTCGCCGACGCAGGGGTGGTCCCAGACGAGGTCGACGGTCTGGTGTGCGCCGGGC CGATGACGAACGAGGGTTCGATCTTCCTGTCCGAGGACCTCATGGACTATCTCGGGCTGCACAATCTGAAACTTCAGATG ACCTGTCAGCTTGGCGGCGGGACCCATCTCGCCATGACGCGCATGGCGAGTAACGTCATCGCCCGGGGCGAGGCCGAGAC GGTGCTGGTCGTGTCGGCGGGCAAGTTTCCACCGATCCGCGATGGCGGGCGCGAACTGATGGCGCTGGTGTGTGACCACG CGTTCGAGATGCCCTATGGACCGTCCGTGCCGGCGCTCTACGGTTTGATCGCGCAGGCCTGGATGCACGAGACGGGACAG GGCAAGGCGGACATCGCCGAGGTCACCGTGTCGCAGGACCGTTGGGCCGCACTGAACCCCGCGGCTATCGCGCACGGCGC TCAACGCCTGACTGTGGAGGACGTGCTGGCGTCCCGGCCGATCGCCGGGCCGTTCCACTTCTACCACTGCTCGATTCCCT GCGAGGGCGGTGGCGCGCTGGTGCTGGGCTCGGCCCGCCGGGCTCGCGCGGGCAAGCACCGGCCGGTGCATTTGCTGGGC TTTGGAGAGGGTCACACCCACGGTTTTCTGACCTCGCTGGCCCGGCCGGGTCGTACCGGGGCCGCCCGTTCGGGTCCGAT GGCCTTTGAGCGCTCCGGACGGGCGCCGGCCGACGTCGACATCGCTTTGCTCTACGACGCCTTCGCCTCCAACCCGGCGA TGATCCTTGAGGAGGCGGGTTTCGTGAAGCCCGGTGGGGCAGGCGATTTCTACCGTGACGGCTGCGCCGATCCGGGGGGC GACCTTCCGGTGAACACCGACGGCGGCCTAATCCGGTTCGGGCACACCGGGACCTCCTCTGGCATTTCGCAGATCCTTGA GGGTTACTGGCAGTTGTCCGGTCGCGCCGAGGGCCGTCAGGTGCCCGGGGCGGATACCGCGTTCGTGCACAGCTACGGCT CGATGCTGTGCAGTCACGTCAGCATGGTGATGGAGGGAGCGTCATGA
Upstream 100 bases:
>100_bases CGGCGGGTGCGGGCGGGGGTGACGCGGACCTCTAGGCACGCTATGCTAACCGTCGTTCACGTCGGGACCGGCGTTGGACG CGTGGTCGAGAGGAGTCCGG
Downstream 100 bases:
>100_bases CCGCAGCTTCGAGTTCTCTCGACGGTCTGCACGATCCTGAGGCGCTGCCGCCGCTGACCGATGTCAACCGTCCCTACTTC GCAGCAGCGGCCCGCGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MPHDQPAIIGAAELAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGSIFLSEDLMDYLGLHNLKLQM TCQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIRDGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQ GKADIAEVTVSQDRWAALNPAAIAHGAQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLG FGEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADVDIALLYDAFASNPAMILEEAGFVKPGGAGDFYRDGCADPGG DLPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQVPGADTAFVHSYGSMLCSHVSMVMEGAS
Sequences:
>Translated_388_residues MPHDQPAIIGAAELAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGSIFLSEDLMDYLGLHNLKLQM TCQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIRDGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQ GKADIAEVTVSQDRWAALNPAAIAHGAQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLG FGEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADVDIALLYDAFASNPAMILEEAGFVKPGGAGDFYRDGCADPGG DLPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQVPGADTAFVHSYGSMLCSHVSMVMEGAS >Mature_387_residues PHDQPAIIGAAELAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGSIFLSEDLMDYLGLHNLKLQMT CQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIRDGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQG KADIAEVTVSQDRWAALNPAAIAHGAQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLGF GEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADVDIALLYDAFASNPAMILEEAGFVKPGGAGDFYRDGCADPGGD LPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQVPGADTAFVHSYGSMLCSHVSMVMEGAS
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=384, Percent_Identity=24.4791666666667, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI302344767, Length=245, Percent_Identity=24.8979591836735, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI302344760, Length=245, Percent_Identity=24.8979591836735, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI302344762, Length=245, Percent_Identity=24.8979591836735, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI19921506, Length=379, Percent_Identity=25.5936675461741, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24585051, Length=382, Percent_Identity=25.6544502617801, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 40533; Mature: 40402
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHDQPAIIGAAELAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGS CCCCCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC IFLSEDLMDYLGLHNLKLQMTCQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIR EEEHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC DGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQGKADIAEVTVSQDRWAALNP CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC AAIAHGAQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLG HHHHCCCHHCCHHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCHHHCCCCCCCEEEEE FGEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADVDIALLYDAFASNPAMILEEAG CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEHHHCCCCEEEECCCC FVKPGGAGDFYRDGCADPGGDLPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC VPGADTAFVHSYGSMLCSHVSMVMEGAS CCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PHDQPAIIGAAELAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGS CCCCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC IFLSEDLMDYLGLHNLKLQMTCQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIR EEEHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC DGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQGKADIAEVTVSQDRWAALNP CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC AAIAHGAQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLG HHHHCCCHHCCHHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCHHHCCCCCCCEEEEE FGEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADVDIALLYDAFASNPAMILEEAG CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEHHHCCCCEEEECCCC FVKPGGAGDFYRDGCADPGGDLPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC VPGADTAFVHSYGSMLCSHVSMVMEGAS CCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]