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The map label for this gene is yngJ [H]

Identifier: 108800147

GI number: 108800147

Start: 3371853

End: 3373052

Strand: Reverse

Name: yngJ [H]

Synonym: Mmcs_3181

Alternate gene names: 108800147

Gene position: 3373052-3371853 (Counterclockwise)

Preceding gene: 108800148

Following gene: 108800145

Centisome position: 59.12

GC content: 61.0

Gene sequence:

>1200_bases
ATGACGGACGCTGGCACGACCACGGCAAGCAGGGATGGGGCTGCTCGTTTCGCTATCGCCCCGGAGGTGTGGACCACGCC
GGAGCGACGAGCGCTGAGCCAAATGGCGCGGTCTTTCTCGGAACGTGAAATCGCGCCGAAGCTAGCGGAATGGGAGCACG
TGGGTGAGATTCCGCGCGACCTGCATCTCAATGCTGCCGAGGTGGGGCTTCTCAGAATCGGGTTCCCGGAAGAAGTCGGC
GGCAGCGGCGGCAATGCGATTGACTCTGCACTGGTCACTGAGGCCATCCTGGCCGCAGGCGGGTCCACTGGCGTCTGCGC
CGCCTTGTTCACCCATGGCATTGCCCTTCCCCACATTGCCGCCAATGGCTCCGACGCCCTGATTCAACGATATGTCCGTC
CTACGCTCGCAGGAAAGATGATCGGCTCGCTGGGCGTTACCGAGCCTGGGGCAGGCTCAGATGTCGCGAATCTGCGCACA
CGCGCGGTGCGCGAGGGGGACACCTACGTGGTCAACGGAGCAAAGACGTTCATCACCAGCGGAGTTCGAGCGGACTTCGT
TACTACGGCGGTACGCACCGGCGGACCGGGTTACGGTGGAGTTTCATTGCTTGTGATCGACAAGAATTCGCCTGGATTCG
AAGTGTCCCGCCGGTTAGACAAGATGGGGTGGCGATGTAGCGACACCGCCGAGTTGTCTTTCGTCGACGTTCGCGTACCG
GCTGACAACCTGGTGGGGGCAGAGAACAGTGGGTTTTTGCAGATCATGCAGCAATTTCAGGCTGAACGGCTCGGCATCGC
CGTCCAGGCGTACGCGACGGCGGGTCGGGCTCTCGACCTTGCCATGAGTTGGGCGCGGGAACGTGAAACGTTCGGTAGAC
CCTTGACGGGGCGCCAGATCATTCGCCATAAGCTTGCGGAGATGGCTCGACAGGTCGACGTGGCGTGCACCTACACCCGT
GCGGTCATGCAGAGGTGGCTAGCGGGGGAGGATGTCGTTGCCGAGGTGTCGATGGCCAAGAACACCGCTGTGTATGCGTG
CGACTACGTGGTCAATGAGGCGGTTCAGATCTTCGGTGGGATGGGCTACATGCGTGAGTCTGAGATCGAGAGACACTATC
GAGATTGCCGAATTCTCGGAATAGGCGGCGGCACCAACGAAATCATGAACGAGGTCATCGCCAAACGTATCGGACTCTAG

Upstream 100 bases:

>100_bases
GCCCCTTGGGTGGTTGGCGTCGGGTCCTTCTTTCCCGTCGTGAGGACGGCAAGCATCAGACACCTCATCGATCATCTATC
ACATTCTCTGGGAGGCTGAG

Downstream 100 bases:

>100_bases
CTACTTGATTGAATCGCCCTGACTTTCCCGGAGGCTCGGGTTATTGGATTCCGGCCAGGGGTTGGTCGGTCCCATGTGCA
TCGTGGAACGCGGCTTCGAA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTDAGTTTASRDGAARFAIAPEVWTTPERRALSQMARSFSEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLRIGFPEEVG
GSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIQRYVRPTLAGKMIGSLGVTEPGAGSDVANLRT
RAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVP
ADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAMSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTR
AVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL

Sequences:

>Translated_399_residues
MTDAGTTTASRDGAARFAIAPEVWTTPERRALSQMARSFSEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLRIGFPEEVG
GSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIQRYVRPTLAGKMIGSLGVTEPGAGSDVANLRT
RAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVP
ADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAMSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTR
AVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL
>Mature_398_residues
TDAGTTTASRDGAARFAIAPEVWTTPERRALSQMARSFSEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLRIGFPEEVGG
SGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIQRYVRPTLAGKMIGSLGVTEPGAGSDVANLRTR
AVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPA
DNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAMSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRA
VMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=35.6382978723404, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI7656849, Length=381, Percent_Identity=32.2834645669291, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI4557233, Length=404, Percent_Identity=36.3861386138614, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=34.6666666666667, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=34.6666666666667, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=30.1333333333333, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI4501859, Length=380, Percent_Identity=29.2105263157895, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI226958414, Length=332, Percent_Identity=30.7228915662651, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI21361497, Length=391, Percent_Identity=29.4117647058824, Blast_Score=148, Evalue=8e-36,
Organism=Homo sapiens, GI4557235, Length=341, Percent_Identity=31.3782991202346, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI76496475, Length=341, Percent_Identity=31.3782991202346, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI38505218, Length=329, Percent_Identity=26.7477203647416, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI48976061, Length=420, Percent_Identity=25.4761904761905, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI211971008, Length=420, Percent_Identity=25.4761904761905, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4503943, Length=285, Percent_Identity=28.0701754385965, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI7669494, Length=265, Percent_Identity=28.6792452830189, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI87081958, Length=346, Percent_Identity=31.5028901734104, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI1786223, Length=342, Percent_Identity=28.0701754385965, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI87082384, Length=259, Percent_Identity=31.2741312741313, Blast_Score=93, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17534899, Length=374, Percent_Identity=32.8877005347594, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=31.3984168865435, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17551932, Length=380, Percent_Identity=32.8947368421053, Blast_Score=201, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17533517, Length=388, Percent_Identity=31.4432989690722, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI17505929, Length=362, Percent_Identity=33.4254143646409, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17570075, Length=365, Percent_Identity=33.1506849315069, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17538396, Length=378, Percent_Identity=29.8941798941799, Blast_Score=178, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI17508101, Length=383, Percent_Identity=28.7206266318538, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=29.3150684931507, Blast_Score=151, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI71990804, Length=278, Percent_Identity=31.294964028777, Blast_Score=138, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71985184, Length=358, Percent_Identity=29.608938547486, Blast_Score=137, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI32563615, Length=228, Percent_Identity=30.2631578947368, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17534353, Length=375, Percent_Identity=24.2666666666667, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71985192, Length=268, Percent_Identity=29.1044776119403, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71982178, Length=291, Percent_Identity=24.0549828178694, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17531909, Length=243, Percent_Identity=25.9259259259259, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=335, Percent_Identity=24.4776119402985, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=33.7765957446808, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24660351, Length=376, Percent_Identity=32.9787234042553, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI21355753, Length=376, Percent_Identity=30.8510638297872, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24646207, Length=370, Percent_Identity=31.8918918918919, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=29.4736842105263, Blast_Score=164, Evalue=8e-41,
Organism=Drosophila melanogaster, GI281363737, Length=341, Percent_Identity=31.3782991202346, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI19920834, Length=402, Percent_Identity=25.1243781094527, Blast_Score=108, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42782; Mature: 42651

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAGTTTASRDGAARFAIAPEVWTTPERRALSQMARSFSEREIAPKLAEWEHVGEIPRD
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHH
LHLNAAEVGLLRIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIA
CCCCHHHCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEE
ANGSDALIQRYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHC
GVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVP
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC
ADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAMSWARERETFGRPLTGRQI
HHHHCCCCCCCHHHHHHHHHHHHHCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH
IRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHCC
MGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL
CCCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDAGTTTASRDGAARFAIAPEVWTTPERRALSQMARSFSEREIAPKLAEWEHVGEIPRD
CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHH
LHLNAAEVGLLRIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIA
CCCCHHHCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEE
ANGSDALIQRYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHC
GVRADFVTTAVRTGGPGYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVP
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC
ADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAMSWARERETFGRPLTGRQI
HHHHCCCCCCCHHHHHHHHHHHHHCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH
IRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHCC
MGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRIGL
CCCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]