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The map label for this gene is 108800063

Identifier: 108800063

GI number: 108800063

Start: 3275274

End: 3276218

Strand: Reverse

Name: 108800063

Synonym: Mmcs_3097

Alternate gene names: NA

Gene position: 3276218-3275274 (Counterclockwise)

Preceding gene: 108800064

Following gene: 161407222

Centisome position: 57.42

GC content: 72.7

Gene sequence:

>945_bases
GTGACCGGGGGCAGCGGGCCGGTCAACGCCGTCGGCCGGATGCTCGGCCTGCTCGGCGACGAGTGGACGCTGCTCCTCGT
CCGCGAAACCCTCCTGGGCGCACGGCGGTTCACCGACTTCCGCACTCTGCCCATCTCCACCGCCGTGCTGACCAACCGGC
TGCGCTCGATGGTGGACGACGGGCTGCTCGACCGCCAGGTCTACCAGCAGCAACCGCTGCGCGCCGGTTACGTTCCCACG
GACCGCTGCTGGGCGCTGTGGCCGGTGCTGGTGTCGATCTGGCACTGGGAGCGCACCTGGGTCCCCGGCCACACCTCGTC
GCTGCCCGCGATGGCGCATCGCGGCTGCGGTCGCGAATTCTCGCCGGTGCTGCGCTGTGCCAGCTGCCGTCGCGCCGTCG
AATCGACCGACGTCGACGGCCGGTGGGGTCCCAGCGGGGGCTGGCAGCGGTCCGTACCCCGCGGCGCGACCCGCAGGCGC
GCCCGCGGCGACGGGACCGCCCAGGCCGGGCTGTTCCCCGAGACCATGGCGATCTTCGGCAACCGCTGGGCCTCGGCGAT
CATCGGTGCGGCGTTCCTCGGGACGCGGCGGTTCAGCGACTTCCAGGGCCGCCTGCGCGCGCCAGCGGCGATGGTGGCCG
AGCACCTGCGGGTGTTCTGCGACATCGGGGTGCTGCAGGCCGCCGCCCATCCGCAGCGCGCCGACTGGTCCGAATACCAC
CTCACGCCCAAGGGCCGGGCGTTCTTCCCGGTCGTCGCATCGTCGATCCACTGGGCCGAGGAGTGGTTCGGGGCACCCGA
GGGTCCGGCGCTGATCCTCACCCACACCGGGTGCGGACAGCGTTTCGTCCCGGAACTGGCCTGCGATCAGTGCGAGGAGA
CACTGACCGCCGACGCGGTCCGGATCCTGCCCCGCGCCGGAGAGCAGGCTGTCATCCGCGGGTGA

Upstream 100 bases:

>100_bases
ACGGTCCGGTGTGCAAGCTGCGGCTTCCTGAAAGAATCTGCAGCGGAACACATTCGACGTGGGTGTCCGGGGCTGAGCTG
CGGCGCTGGCACAGCCCGCG

Downstream 100 bases:

>100_bases
CGCGCGCGGACTCCCCGCCCAGGGTCACGGTGTCGCCGGGGTGGAGTTGGCGGCCCCGGCGCAGTTCCACCTCGCCGTTG
ACCGTGACCGCCCCGTCGGC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTGGSGPVNAVGRMLGLLGDEWTLLLVRETLLGARRFTDFRTLPISTAVLTNRLRSMVDDGLLDRQVYQQQPLRAGYVPT
DRCWALWPVLVSIWHWERTWVPGHTSSLPAMAHRGCGREFSPVLRCASCRRAVESTDVDGRWGPSGGWQRSVPRGATRRR
ARGDGTAQAGLFPETMAIFGNRWASAIIGAAFLGTRRFSDFQGRLRAPAAMVAEHLRVFCDIGVLQAAAHPQRADWSEYH
LTPKGRAFFPVVASSIHWAEEWFGAPEGPALILTHTGCGQRFVPELACDQCEETLTADAVRILPRAGEQAVIRG

Sequences:

>Translated_314_residues
MTGGSGPVNAVGRMLGLLGDEWTLLLVRETLLGARRFTDFRTLPISTAVLTNRLRSMVDDGLLDRQVYQQQPLRAGYVPT
DRCWALWPVLVSIWHWERTWVPGHTSSLPAMAHRGCGREFSPVLRCASCRRAVESTDVDGRWGPSGGWQRSVPRGATRRR
ARGDGTAQAGLFPETMAIFGNRWASAIIGAAFLGTRRFSDFQGRLRAPAAMVAEHLRVFCDIGVLQAAAHPQRADWSEYH
LTPKGRAFFPVVASSIHWAEEWFGAPEGPALILTHTGCGQRFVPELACDQCEETLTADAVRILPRAGEQAVIRG
>Mature_313_residues
TGGSGPVNAVGRMLGLLGDEWTLLLVRETLLGARRFTDFRTLPISTAVLTNRLRSMVDDGLLDRQVYQQQPLRAGYVPTD
RCWALWPVLVSIWHWERTWVPGHTSSLPAMAHRGCGREFSPVLRCASCRRAVESTDVDGRWGPSGGWQRSVPRGATRRRA
RGDGTAQAGLFPETMAIFGNRWASAIIGAAFLGTRRFSDFQGRLRAPAAMVAEHLRVFCDIGVLQAAAHPQRADWSEYHL
TPKGRAFFPVVASSIHWAEEWFGAPEGPALILTHTGCGQRFVPELACDQCEETLTADAVRILPRAGEQAVIRG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 34627; Mature: 34496

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCCCC
>Mature Secondary Structure 
TGGSGPVNAVGRMLGLLGDEWTLLLVRETLLGARRFTDFRTLPISTAVLTNRLRSMVDD
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
GLLDRQVYQQQPLRAGYVPTDRCWALWPVLVSIWHWERTWVPGHTSSLPAMAHRGCGREF
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCHH
SPVLRCASCRRAVESTDVDGRWGPSGGWQRSVPRGATRRRARGDGTAQAGLFPETMAIFG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHH
NRWASAIIGAAFLGTRRFSDFQGRLRAPAAMVAEHLRVFCDIGVLQAAAHPQRADWSEYH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
LTPKGRAFFPVVASSIHWAEEWFGAPEGPALILTHTGCGQRFVPELACDQCEETLTADAV
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
RILPRAGEQAVIRG
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]