| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is hisB
Identifier: 108800027
GI number: 108800027
Start: 3236738
End: 3237364
Strand: Reverse
Name: hisB
Synonym: Mmcs_3061
Alternate gene names: 108800027
Gene position: 3237364-3236738 (Counterclockwise)
Preceding gene: 108800028
Following gene: 108800026
Centisome position: 56.74
GC content: 65.55
Gene sequence:
>627_bases ATGACCGACATGCTGACCGGCACCCGCCGCGCCCGCGTCGAACGCAAGACCAAGGAATCGGACATCGTCGTCGATCTCGA CCTCGACGGCACCGGCATCGTCGACATCCGCACCGGCGTGCCGTTCTTCGATCACATGCTGACCTCGTTGGGCAGCCACG CCAGCTTCGACCTCACCGTGCACGCCACGGGCGATATCGAGATCGAAGGGCACCACACGGTCGAGGACACCGCGATCGTG CTCGGGCAGGCGCTCGGTCAGGCGCTCGGCGACAAGAAGGGCATCCGCCGTTTCGGTGACGCGTTCATCCCGATGGACGA GACACTCGCCCACGCCGCGGTCGACGTGTCCGGTCGCCCGTACTTCGTGCACACCGGTGAACCCGACTACATGGTCGAGT TCACCATCGCCGGATCGAGTGCGCCCTACCACACGGTGATCAACCGTCACGTCTTCGAATCGTTGGCGTTCAACGCCCGC ATCGCGCTGCATGTGCGCACGATCTACGGCCGCGATCCGCACCACATCACCGAGGCGCAGTACAAGGCCGTCGCGCGCGC GTTGCGCCAGGCCGTCGAACTCGATCCGCGGGTGACGGGTGTGCCGTCCACGAAAGGCTCACTGTGA
Upstream 100 bases:
>100_bases ACCTGCGGACCACAATCGGGTTGGCCGAAGAGAACGATGCGCTGCTGACCGCCTCAGCCCGCCTCGTCGAGACCGAACTC GCGGCAACATTAGGAGCCTT
Downstream 100 bases:
>100_bases GCAGGAAAGTCGTCATCCTCGACTACGGCTCGGGCAATCTGCGCTCGGCGCAGCGCGCGGTCGAGCGCACCGGTGCCGAC GTCGAGGTCACCGCCGACGC
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTDMLTGTRRARVERKTKESDIVVDLDLDGTGIVDIRTGVPFFDHMLTSLGSHASFDLTVHATGDIEIEGHHTVEDTAIV LGQALGQALGDKKGIRRFGDAFIPMDETLAHAAVDVSGRPYFVHTGEPDYMVEFTIAGSSAPYHTVINRHVFESLAFNAR IALHVRTIYGRDPHHITEAQYKAVARALRQAVELDPRVTGVPSTKGSL
Sequences:
>Translated_208_residues MTDMLTGTRRARVERKTKESDIVVDLDLDGTGIVDIRTGVPFFDHMLTSLGSHASFDLTVHATGDIEIEGHHTVEDTAIV LGQALGQALGDKKGIRRFGDAFIPMDETLAHAAVDVSGRPYFVHTGEPDYMVEFTIAGSSAPYHTVINRHVFESLAFNAR IALHVRTIYGRDPHHITEAQYKAVARALRQAVELDPRVTGVPSTKGSL >Mature_207_residues TDMLTGTRRARVERKTKESDIVVDLDLDGTGIVDIRTGVPFFDHMLTSLGSHASFDLTVHATGDIEIEGHHTVEDTAIVL GQALGQALGDKKGIRRFGDAFIPMDETLAHAAVDVSGRPYFVHTGEPDYMVEFTIAGSSAPYHTVINRHVFESLAFNARI ALHVRTIYGRDPHHITEAQYKAVARALRQAVELDPRVTGVPSTKGSL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=202, Percent_Identity=45.049504950495, Blast_Score=154, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6324776, Length=226, Percent_Identity=35.8407079646018, Blast_Score=135, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_MYCSJ (A3Q129)
Other databases:
- EMBL: CP000580 - RefSeq: YP_001071347.1 - ProteinModelPortal: A3Q129 - SMR: A3Q129 - STRING: A3Q129 - EnsemblBacteria: EBMYCT00000050170 - GeneID: 4878790 - GenomeReviews: CP000580_GR - KEGG: mjl:Mjls_3077 - eggNOG: COG0131 - GeneTree: EBGT00050000017533 - HOGENOM: HBG289010 - OMA: RQAVEYD - ProtClustDB: PRK00951 - BioCyc: MSP164757:MJLS_3077-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22759; Mature: 22628
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDMLTGTRRARVERKTKESDIVVDLDLDGTGIVDIRTGVPFFDHMLTSLGSHASFDLTV CCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEE HATGDIEIEGHHTVEDTAIVLGQALGQALGDKKGIRRFGDAFIPMDETLAHAAVDVSGRP EECCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHEEECCCCE YFVHTGEPDYMVEFTIAGSSAPYHTVINRHVFESLAFNARIALHVRTIYGRDPHHITEAQ EEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHHH YKAVARALRQAVELDPRVTGVPSTKGSL HHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TDMLTGTRRARVERKTKESDIVVDLDLDGTGIVDIRTGVPFFDHMLTSLGSHASFDLTV CCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEE HATGDIEIEGHHTVEDTAIVLGQALGQALGDKKGIRRFGDAFIPMDETLAHAAVDVSGRP EECCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHEEECCCCE YFVHTGEPDYMVEFTIAGSSAPYHTVINRHVFESLAFNARIALHVRTIYGRDPHHITEAQ EEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHHH YKAVARALRQAVELDPRVTGVPSTKGSL HHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA