| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is pheT [H]
Identifier: 108799939
GI number: 108799939
Start: 3137916
End: 3140414
Strand: Reverse
Name: pheT [H]
Synonym: Mmcs_2973
Alternate gene names: 108799939
Gene position: 3140414-3137916 (Counterclockwise)
Preceding gene: 108799940
Following gene: 108799938
Centisome position: 55.04
GC content: 73.03
Gene sequence:
>2499_bases ATGCGGCTGCCGTACAGCTGGCTGCGCGAGGTCGTGGCTGCCGGCGCGCCCGGATGGGACGTGTCCGCCGAGGAGCTCGA GCAGACCTTGATCCGCATCGGCCACGAGGTCGAGGACGTGCTGCCGGTCGGCCCGGTGACGGGACCCCTCATCGTCGGCC GCGTCGCCGAGATCGAGGAGCTCACCGAGTTCAAGAAGCCGATCCGCGCCGTCAAGGTCGACGTCGGCGAGCCGGAGAAC CGTGACATCGTCTGCGGGGCAACCAATTTCGCCGTCGGTGATCTGGTGGTGGTGGCGCTGCCGGGTGCCACGCTGCCCGG CGACTTCACAATCGCCACCCGCAAGACCTACGGCCGCACCTCCGACGGGATGATCTGCTCGACCGCCGAACTCAACCTCG GCGCCGACCACTCCGGCATCCTCGTGCTGCCGCCCGGCACCGCCGCGCCCGGTACACCGGCCGCCGAGGTGCTCGGCCTC GACGACACCGTGTTCGACCTGGCGATCACGCCGGACCGCGGCTACTGCCTGTCGGTGCGCGGGATGGCCCGCGAGATCGC CTGCGCCTACGACCTCGACTACGTCGACCCGGCGTTCGATCCGGAGCGGGTGCCCGCCCTCCCCGTCGAGGGTGAGGCGC TGCCGGTGGCGATCGACCCGGGCACCGGGGTGTTGCGGTTCGGGTTACGGCCCGTCACCGGGATCGACCCCGCCGCCGTG TCGCCGTGGTGGATGCAGCGCCGCCTGCTGCTGTCGGGCATCCGGGCGATATCCCCGGCGGTCGACGTGACCAACTACGT GATGCTCGAGTTCGGTCACCCGATGCACGCCCACGACCGCAGCCTGATCACCGGCGGCTTCCGGGTGCGTTTCGCCGAGC CCGGCGAGACGGTGGTCACCCTCGACGACATCGAACGCCGACTGGATCCGGCCGACGTGCTGATCGTCGACGACGAGGCC ACCGCCGCGATCGGCGGCGTGATGGGGGCGGGCACGACCGAGGTCCGCGAGACGACCACCGATGTGTTGCTGGAGGCGGC GGTGTGGGATCCGGCCGCGGTCTCGCGCACCCAGCGCAGGCTGCGCCTGGCCAGTGAGGCCGGCCGTCGCTACGAGCGCA CCGTCGACCCGGCCATCTCGGTCGCCGCGCTCGACCGGTGCGCCGCCCTGCTCGCCGACATCGCCGGCGGCGCTGTGGAA CCGCGGCTGACCGACTGGCGGGGCGACCCGCCGCGCGAGGACTGGTCGCCGCCACCGGTGTCGATGGCCCTCGACCGCCC CGACCGCACCGCCGGCGTCGACTATCCGCCCGGCACCACCGAGCGGCGGCTCACCCAGATCGGCGCCGTCGTGCGCGTCG ACGGCGACCGGGTGACGGCCGTCCCGCCGAGTTGGCGCCCCGACATCAGGCAGCCGGCCGACCTGGTCGAGGAGGTGCTG CGGCTCGAGGGTCTCGAGCAGATCCCGTCGGTGCTGCCGGCCGCTCCGGCGGGTCGCGGCCTGACCGCCGTGCAGAAGCG GCGCCGCGCGATCGGAAAGTCGCTGGCGCTCAGCGGCTACGTCGAGATCCTGCCCACGCCGTTCCTGCCCGCCGGGGTGT TCGACGTGTGGGGTCTGGCCGACGACGACCCCCGCCGTGCGACCACCCAGGTGCTCAATCCGTTGGAGGCCGACCGGCCG CACCTGGCCACGACGCTGCTGCCCGGCCTGCTGGAGGCGTTGGCCCGCAACGTGTCTCGCGGCGCGGCCGATGCGGCGCT GTTCGCCATCGCCCAGGTCGTCGAGCCCACCGAGGACACCCGCGCGGTCGAGCGGATCCCCAACGACCGCCGTCCGACCG ATGACGAGATCGCCACCCTCGACGCGTCCCTGCCGCGTCAGCCCCAGCACGTCGGTGCGGTGCTGACCGGTCTGCGTGAA CCCGCCGGTCCCTGGGGCCGCGGTCGTCCGGTCGAGGCGGCCGATGCGTTCGAGATGGTGCGGATCGTGGGACGGGCGGC CGAGGTGGAGTTCACGCTGCGCTCCGCTCAGCGCCTGCCGTGGCATCCGGGGCGGTGTGCCGAGGTGCTGATCGGCGACA CCGTCGTCGGCCATGCCGGACAGCTGCATCCGGCGATGGTGGAACGGGCCGGCCTGCCCAAGGGCACGTGCGCGGTCGAA CTCGACCTCGATGCGGTGCCGATCACCGAGCGGCTGCCCGCGCCGCGGGTGTCGCCGTTCCCCGCCGTATTCCAGGACGT CAGCCTCATCGTGGACGACGACGTCGCCGCGCAGAGTGTGGTCGAGGCGGTGCGGTCGGGCGCCGGCGAACTGCTCGAGG ACGTGCGGTTGTTCGACGTCTACACCGGCCCGCAGATCGGGGAGGGGCGCAAATCGCTGGCCCTCGCGTTGCGGTTCCGC GCGGCCGACCGGACCCTGACCGAGGACGAGGCGAGCACGGCGCGGGAGGCGGCGGTGCAGGCCGCGGCTGAACAGGTCGG TGCGCAGCAGCGCCGCTGA
Upstream 100 bases:
>100_bases GTTTGGAGCGAACATTGCAGTTCCGCAACGGGATTCCCGACATGCGCGACATGGTCGAGGGTGACGTCCGGTTCTCGCTG CCCTTCGGGGTGGGCGCCTG
Downstream 100 bases:
>100_bases ACTGCTCGCCGGCCAACCGTTAAATGAGTTTGCATTTAACTGCATAAACATGCAAACTCTATGCATGACTTCTGTCGCGG TCGCCGGGGCCAGCGGATAC
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 832; Mature: 832
Protein sequence:
>832_residues MRLPYSWLREVVAAGAPGWDVSAEELEQTLIRIGHEVEDVLPVGPVTGPLIVGRVAEIEELTEFKKPIRAVKVDVGEPEN RDIVCGATNFAVGDLVVVALPGATLPGDFTIATRKTYGRTSDGMICSTAELNLGADHSGILVLPPGTAAPGTPAAEVLGL DDTVFDLAITPDRGYCLSVRGMAREIACAYDLDYVDPAFDPERVPALPVEGEALPVAIDPGTGVLRFGLRPVTGIDPAAV SPWWMQRRLLLSGIRAISPAVDVTNYVMLEFGHPMHAHDRSLITGGFRVRFAEPGETVVTLDDIERRLDPADVLIVDDEA TAAIGGVMGAGTTEVRETTTDVLLEAAVWDPAAVSRTQRRLRLASEAGRRYERTVDPAISVAALDRCAALLADIAGGAVE PRLTDWRGDPPREDWSPPPVSMALDRPDRTAGVDYPPGTTERRLTQIGAVVRVDGDRVTAVPPSWRPDIRQPADLVEEVL RLEGLEQIPSVLPAAPAGRGLTAVQKRRRAIGKSLALSGYVEILPTPFLPAGVFDVWGLADDDPRRATTQVLNPLEADRP HLATTLLPGLLEALARNVSRGAADAALFAIAQVVEPTEDTRAVERIPNDRRPTDDEIATLDASLPRQPQHVGAVLTGLRE PAGPWGRGRPVEAADAFEMVRIVGRAAEVEFTLRSAQRLPWHPGRCAEVLIGDTVVGHAGQLHPAMVERAGLPKGTCAVE LDLDAVPITERLPAPRVSPFPAVFQDVSLIVDDDVAAQSVVEAVRSGAGELLEDVRLFDVYTGPQIGEGRKSLALALRFR AADRTLTEDEASTAREAAVQAAAEQVGAQQRR
Sequences:
>Translated_832_residues MRLPYSWLREVVAAGAPGWDVSAEELEQTLIRIGHEVEDVLPVGPVTGPLIVGRVAEIEELTEFKKPIRAVKVDVGEPEN RDIVCGATNFAVGDLVVVALPGATLPGDFTIATRKTYGRTSDGMICSTAELNLGADHSGILVLPPGTAAPGTPAAEVLGL DDTVFDLAITPDRGYCLSVRGMAREIACAYDLDYVDPAFDPERVPALPVEGEALPVAIDPGTGVLRFGLRPVTGIDPAAV SPWWMQRRLLLSGIRAISPAVDVTNYVMLEFGHPMHAHDRSLITGGFRVRFAEPGETVVTLDDIERRLDPADVLIVDDEA TAAIGGVMGAGTTEVRETTTDVLLEAAVWDPAAVSRTQRRLRLASEAGRRYERTVDPAISVAALDRCAALLADIAGGAVE PRLTDWRGDPPREDWSPPPVSMALDRPDRTAGVDYPPGTTERRLTQIGAVVRVDGDRVTAVPPSWRPDIRQPADLVEEVL RLEGLEQIPSVLPAAPAGRGLTAVQKRRRAIGKSLALSGYVEILPTPFLPAGVFDVWGLADDDPRRATTQVLNPLEADRP HLATTLLPGLLEALARNVSRGAADAALFAIAQVVEPTEDTRAVERIPNDRRPTDDEIATLDASLPRQPQHVGAVLTGLRE PAGPWGRGRPVEAADAFEMVRIVGRAAEVEFTLRSAQRLPWHPGRCAEVLIGDTVVGHAGQLHPAMVERAGLPKGTCAVE LDLDAVPITERLPAPRVSPFPAVFQDVSLIVDDDVAAQSVVEAVRSGAGELLEDVRLFDVYTGPQIGEGRKSLALALRFR AADRTLTEDEASTAREAAVQAAAEQVGAQQRR >Mature_832_residues MRLPYSWLREVVAAGAPGWDVSAEELEQTLIRIGHEVEDVLPVGPVTGPLIVGRVAEIEELTEFKKPIRAVKVDVGEPEN RDIVCGATNFAVGDLVVVALPGATLPGDFTIATRKTYGRTSDGMICSTAELNLGADHSGILVLPPGTAAPGTPAAEVLGL DDTVFDLAITPDRGYCLSVRGMAREIACAYDLDYVDPAFDPERVPALPVEGEALPVAIDPGTGVLRFGLRPVTGIDPAAV SPWWMQRRLLLSGIRAISPAVDVTNYVMLEFGHPMHAHDRSLITGGFRVRFAEPGETVVTLDDIERRLDPADVLIVDDEA TAAIGGVMGAGTTEVRETTTDVLLEAAVWDPAAVSRTQRRLRLASEAGRRYERTVDPAISVAALDRCAALLADIAGGAVE PRLTDWRGDPPREDWSPPPVSMALDRPDRTAGVDYPPGTTERRLTQIGAVVRVDGDRVTAVPPSWRPDIRQPADLVEEVL RLEGLEQIPSVLPAAPAGRGLTAVQKRRRAIGKSLALSGYVEILPTPFLPAGVFDVWGLADDDPRRATTQVLNPLEADRP HLATTLLPGLLEALARNVSRGAADAALFAIAQVVEPTEDTRAVERIPNDRRPTDDEIATLDASLPRQPQHVGAVLTGLRE PAGPWGRGRPVEAADAFEMVRIVGRAAEVEFTLRSAQRLPWHPGRCAEVLIGDTVVGHAGQLHPAMVERAGLPKGTCAVE LDLDAVPITERLPAPRVSPFPAVFQDVSLIVDDDVAAQSVVEAVRSGAGELLEDVRLFDVYTGPQIGEGRKSLALALRFR AADRTLTEDEASTAREAAVQAAAEQVGAQQRR
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=842, Percent_Identity=32.4228028503563, Blast_Score=343, Evalue=2e-95,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 89067; Mature: 89067
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS50886 TRBD ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPYSWLREVVAAGAPGWDVSAEELEQTLIRIGHEVEDVLPVGPVTGPLIVGRVAEIEE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHH LTEFKKPIRAVKVDVGEPENRDIVCGATNFAVGDLVVVALPGATLPGDFTIATRKTYGRT HHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCC SDGMICSTAELNLGADHSGILVLPPGTAAPGTPAAEVLGLDDTVFDLAITPDRGYCLSVR CCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCHHHEECCCCCEEEEEECCCCCEEEEEC GMAREIACAYDLDYVDPAFDPERVPALPVEGEALPVAIDPGTGVLRFGLRPVTGIDPAAV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCC SPWWMQRRLLLSGIRAISPAVDVTNYVMLEFGHPMHAHDRSLITGGFRVRFAEPGETVVT CHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCCCCCCCCEEECCEEEEEECCCCEEEE LDDIERRLDPADVLIVDDEATAAIGGVMGAGTTEVRETTTDVLLEAAVWDPAAVSRTQRR HHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH LRLASEAGRRYERTVDPAISVAALDRCAALLADIAGGAVEPRLTDWRGDPPREDWSPPPV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SMALDRPDRTAGVDYPPGTTERRLTQIGAVVRVDGDRVTAVPPSWRPDIRQPADLVEEVL EEEECCCCCCCCCCCCCCCHHHHHHHHCEEEEECCCEEEECCCCCCCCCCCHHHHHHHHH RLEGLEQIPSVLPAAPAGRGLTAVQKRRRAIGKSLALSGYVEILPTPFLPAGVFDVWGLA HHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHCCCC DDDPRRATTQVLNPLEADRPHLATTLLPGLLEALARNVSRGAADAALFAIAQVVEPTEDT CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH RAVERIPNDRRPTDDEIATLDASLPRQPQHVGAVLTGLREPAGPWGRGRPVEAADAFEMV HHHHHCCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH RIVGRAAEVEFTLRSAQRLPWHPGRCAEVLIGDTVVGHAGQLHPAMVERAGLPKGTCAVE HHHHHHHHEEEEEHHCCCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHCCCCCCCEEEE LDLDAVPITERLPAPRVSPFPAVFQDVSLIVDDDVAAQSVVEAVRSGAGELLEDVRLFDV EECCCCCHHHCCCCCCCCCCHHHHHCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHHEEE YTGPQIGEGRKSLALALRFRAADRTLTEDEASTAREAAVQAAAEQVGAQQRR ECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLPYSWLREVVAAGAPGWDVSAEELEQTLIRIGHEVEDVLPVGPVTGPLIVGRVAEIEE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHH LTEFKKPIRAVKVDVGEPENRDIVCGATNFAVGDLVVVALPGATLPGDFTIATRKTYGRT HHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCC SDGMICSTAELNLGADHSGILVLPPGTAAPGTPAAEVLGLDDTVFDLAITPDRGYCLSVR CCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCHHHEECCCCCEEEEEECCCCCEEEEEC GMAREIACAYDLDYVDPAFDPERVPALPVEGEALPVAIDPGTGVLRFGLRPVTGIDPAAV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCC SPWWMQRRLLLSGIRAISPAVDVTNYVMLEFGHPMHAHDRSLITGGFRVRFAEPGETVVT CHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCCCCCCCCEEECCEEEEEECCCCEEEE LDDIERRLDPADVLIVDDEATAAIGGVMGAGTTEVRETTTDVLLEAAVWDPAAVSRTQRR HHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH LRLASEAGRRYERTVDPAISVAALDRCAALLADIAGGAVEPRLTDWRGDPPREDWSPPPV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SMALDRPDRTAGVDYPPGTTERRLTQIGAVVRVDGDRVTAVPPSWRPDIRQPADLVEEVL EEEECCCCCCCCCCCCCCCHHHHHHHHCEEEEECCCEEEECCCCCCCCCCCHHHHHHHHH RLEGLEQIPSVLPAAPAGRGLTAVQKRRRAIGKSLALSGYVEILPTPFLPAGVFDVWGLA HHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHCCCC DDDPRRATTQVLNPLEADRPHLATTLLPGLLEALARNVSRGAADAALFAIAQVVEPTEDT CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH RAVERIPNDRRPTDDEIATLDASLPRQPQHVGAVLTGLREPAGPWGRGRPVEAADAFEMV HHHHHCCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH RIVGRAAEVEFTLRSAQRLPWHPGRCAEVLIGDTVVGHAGQLHPAMVERAGLPKGTCAVE HHHHHHHHEEEEEHHCCCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHCCCCCCCEEEE LDLDAVPITERLPAPRVSPFPAVFQDVSLIVDDDVAAQSVVEAVRSGAGELLEDVRLFDV EECCCCCHHHCCCCCCCCCCHHHHHCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHHEEE YTGPQIGEGRKSLALALRFRAADRTLTEDEASTAREAAVQAAAEQVGAQQRR ECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]