| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799168
Identifier: 108799168
GI number: 108799168
Start: 2338398
End: 2338877
Strand: Reverse
Name: 108799168
Synonym: Mmcs_2201
Alternate gene names: NA
Gene position: 2338877-2338398 (Counterclockwise)
Preceding gene: 108799172
Following gene: 108799164
Centisome position: 40.99
GC content: 71.67
Gene sequence:
>480_bases GTGGCCGACGAGGACGCGACCGAGGCGGCCGAAGCACTCGCCCTCGTCCTGACCAGTCACGGTCTGCAACGCATGACGTC CAGGGTGCTGGCCGCGTTGTTGTTCACCGAACAGCCGACGTTGACGGCCGGCGAACTCGCCGCCCGCCTGCAGGCCAGCG CGGGCGCGATCTCCGGCGCCGTCAAGATGCTCGTCTCCGTCGGCCTGGTCGAGCGGGTGCCTGCGCCCGGGAGCCGCCGG GACCACTACCGGCTGCGCGACGATGCGTGGGCGGTGCTGTACACCACCCAGAACGAGATCCTCGCCGGGCTGCGGAAGGC CGCCGAGGACGGGATCGCCGTGAGCCCGACCGGTTCCGCCGCGCGGACACGGCTTCTGGAGATGCGGGACTTCTACGCCT TCCTGCTGGACGAGATGCCCGCCGTCCTCGACCGCTGGCGGGCACACAGGTCACCGCCGGGCGCGCCGACGCAGATGTGA
Upstream 100 bases:
>100_bases CTTTCGACAGCGGGATACCACATTCCGACCAGACTTCCCGGAGCACCGTCAGCGACTATACTGAACTTTCAGTAATTTGT GAAACCGTTTGGGAGGCAGA
Downstream 100 bases:
>100_bases GGACCGGGCGGCTCAGCGGCGTGCCGCGAGCGTCGCATCCGACCACAGCGCCGCCCCTGCATGGCCGAGCAGCAACTTGC TGTAGAACACCGGACCGAAC
Product: transcriptional regulator TrmB
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MADEDATEAAEALALVLTSHGLQRMTSRVLAALLFTEQPTLTAGELAARLQASAGAISGAVKMLVSVGLVERVPAPGSRR DHYRLRDDAWAVLYTTQNEILAGLRKAAEDGIAVSPTGSAARTRLLEMRDFYAFLLDEMPAVLDRWRAHRSPPGAPTQM
Sequences:
>Translated_159_residues MADEDATEAAEALALVLTSHGLQRMTSRVLAALLFTEQPTLTAGELAARLQASAGAISGAVKMLVSVGLVERVPAPGSRR DHYRLRDDAWAVLYTTQNEILAGLRKAAEDGIAVSPTGSAARTRLLEMRDFYAFLLDEMPAVLDRWRAHRSPPGAPTQM >Mature_158_residues ADEDATEAAEALALVLTSHGLQRMTSRVLAALLFTEQPTLTAGELAARLQASAGAISGAVKMLVSVGLVERVPAPGSRRD HYRLRDDAWAVLYTTQNEILAGLRKAAEDGIAVSPTGSAARTRLLEMRDFYAFLLDEMPAVLDRWRAHRSPPGAPTQM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17142; Mature: 17011
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADEDATEAAEALALVLTSHGLQRMTSRVLAALLFTEQPTLTAGELAARLQASAGAISGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VKMLVSVGLVERVPAPGSRRDHYRLRDDAWAVLYTTQNEILAGLRKAAEDGIAVSPTGSA HHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEECHHHHHHHHHHHHHCCEEECCCCHH ARTRLLEMRDFYAFLLDEMPAVLDRWRAHRSPPGAPTQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ADEDATEAAEALALVLTSHGLQRMTSRVLAALLFTEQPTLTAGELAARLQASAGAISGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VKMLVSVGLVERVPAPGSRRDHYRLRDDAWAVLYTTQNEILAGLRKAAEDGIAVSPTGSA HHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEECHHHHHHHHHHHHHCCEEECCCCHH ARTRLLEMRDFYAFLLDEMPAVLDRWRAHRSPPGAPTQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA