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The map label for this gene is trkA [H]

Identifier: 108799164

GI number: 108799164

Start: 2333857

End: 2334510

Strand: Reverse

Name: trkA [H]

Synonym: Mmcs_2197

Alternate gene names: 108799164

Gene position: 2334510-2333857 (Counterclockwise)

Preceding gene: 108799168

Following gene: 108799163

Centisome position: 40.92

GC content: 69.42

Gene sequence:

>654_bases
ATGGGATGCGGTCGGGTGGGGGCTTCCCTGTCCGACAGCCTGTCGCGGATCGGTCATGACGTGGCTGTCATCGACCGGGA
CGCGACCGCCTTCCACCGGCTCAGTCCCGAGTTCGTGGGTGAGCGGGTGCTGGGCATGGGCTTCGACCGGGACGTGCTGC
TGCGCGCCGGTATCGAGGAGGCCAGTGCGTTCGCCGCGGTCTCCTCCGGCGACAACTCCAACATCATCTCCGCGCGTGTC
GCCCGGGAGACCTTCGGCGTGGAACGGGTGGTGGCCCGCATCTACGACGCGAAACGCGCCGCGGTCTACGAACGCCTCGG
CATTCCCACCGTCGCCACGGTGCCGTGGACCACCGACCGGCTGCTCAATGTGCTGACCCGTGAGACCGAGACCACCAAGT
GGCGCGACCCGTCGGGCAACGTCGGGGTGGCCGAGCTACCCCTGCACGAGGATTGGGTGGGCCACCGCGTCACCCAGTTG
GAGGCGGCGACCAGCGGCCGGGTGGCGTTCCTCATCCGCTTCGGCAGCGGTGTGCTGCCCGACGCCAAGACCGTCATCCA
GGCCGGCGATCAGGTCTACATCGCCGCCGTGGCAGGCCATATCGCGGAGGCGATGGCGATCAGCGCGCTGCCCCCGGGTG
AGGACGACTCGTGA

Upstream 100 bases:

>100_bases
TATGCCCAGTGACGCAGGGCTGTAGCGTTCCGGTTGCGGAGATTCGCTACTGGCTTCACAGCAGCAGAGCCGAAAGGAAC
CGCAGGTGCGTGTAGTGGTG

Downstream 100 bases:

>100_bases
AGGTGGCCGTTTCGTGAAGGTAGCTATCGCCGGGGCCGGCGCCGTGGGCCGGTCCATCGCCAGGGAACTCCTCGAAAGCA
ACCACGAGGTGACGCTGCTC

Product: TrkA-N

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MGCGRVGASLSDSLSRIGHDVAVIDRDATAFHRLSPEFVGERVLGMGFDRDVLLRAGIEEASAFAAVSSGDNSNIISARV
ARETFGVERVVARIYDAKRAAVYERLGIPTVATVPWTTDRLLNVLTRETETTKWRDPSGNVGVAELPLHEDWVGHRVTQL
EAATSGRVAFLIRFGSGVLPDAKTVIQAGDQVYIAAVAGHIAEAMAISALPPGEDDS

Sequences:

>Translated_217_residues
MGCGRVGASLSDSLSRIGHDVAVIDRDATAFHRLSPEFVGERVLGMGFDRDVLLRAGIEEASAFAAVSSGDNSNIISARV
ARETFGVERVVARIYDAKRAAVYERLGIPTVATVPWTTDRLLNVLTRETETTKWRDPSGNVGVAELPLHEDWVGHRVTQL
EAATSGRVAFLIRFGSGVLPDAKTVIQAGDQVYIAAVAGHIAEAMAISALPPGEDDS
>Mature_216_residues
GCGRVGASLSDSLSRIGHDVAVIDRDATAFHRLSPEFVGERVLGMGFDRDVLLRAGIEEASAFAAVSSGDNSNIISARVA
RETFGVERVVARIYDAKRAAVYERLGIPTVATVPWTTDRLLNVLTRETETTKWRDPSGNVGVAELPLHEDWVGHRVTQLE
AATSGRVAFLIRFGSGVLPDAKTVIQAGDQVYIAAVAGHIAEAMAISALPPGEDDS

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 23153; Mature: 23022

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCGRVGASLSDSLSRIGHDVAVIDRDATAFHRLSPEFVGERVLGMGFDRDVLLRAGIEE
CCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCHH
ASAFAAVSSGDNSNIISARVARETFGVERVVARIYDAKRAAVYERLGIPTVATVPWTTDR
HHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHH
LLNVLTRETETTKWRDPSGNVGVAELPLHEDWVGHRVTQLEAATSGRVAFLIRFGSGVLP
HHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
DAKTVIQAGDQVYIAAVAGHIAEAMAISALPPGEDDS
CHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GCGRVGASLSDSLSRIGHDVAVIDRDATAFHRLSPEFVGERVLGMGFDRDVLLRAGIEE
CCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCHH
ASAFAAVSSGDNSNIISARVARETFGVERVVARIYDAKRAAVYERLGIPTVATVPWTTDR
HHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHH
LLNVLTRETETTKWRDPSGNVGVAELPLHEDWVGHRVTQLEAATSGRVAFLIRFGSGVLP
HHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
DAKTVIQAGDQVYIAAVAGHIAEAMAISALPPGEDDS
CHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953; 2294088 [H]