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The map label for this gene is 108798576

Identifier: 108798576

GI number: 108798576

Start: 1741710

End: 1743002

Strand: Reverse

Name: 108798576

Synonym: Mmcs_1606

Alternate gene names: NA

Gene position: 1743002-1741710 (Counterclockwise)

Preceding gene: 108798577

Following gene: 108798575

Centisome position: 30.55

GC content: 71.08

Gene sequence:

>1293_bases
GTGTCAGACCACGCTGACATACTCGAACACATGTTTGAAGCGAGCGAAACGGCGCTGATCGAGCGGATCGCGGCGCTGGA
ACGGGCGAAGTCCGCCGCGGCGGCTGCGCAGGCACGCGCGACCGCGTTGCTGGACGAGAAGCGCCGGGCCGCCGAGGCGG
CGGCCGGTGTGCCCGCGAACAAGCGAGGCCGCGGTCTGGCCTCGGAGGTGGCGCTGGCGCGGCACGACTGCCCGAACAAA
GGCGGCCGCCACCTCGGATTCGCCCGAGCGCTGGTCCACGAGATGCCCCACACCCTGGCCGCACTCGAGTGCGGTGCACT
GTCGGAGTGGCGGGCGACGTTGATCGTCCGGGAATCGGCGTGCCTGTCGGTCGAGGACCGGCGCATGTTGGACGCCGAGT
TGTGTCGCGACGTATCGAGGTTGGAAGGCCTCGGCGACAAGCGCATCGAGGCCGAGGCGAAGAGGATCGCCTACCGCCTC
GACCCTCAGGCGGTGGTCGACCGGGCCGCCAAGGCGGCCTCGGAGCGCACCGTGACGTGCCGGCCGGCGCCGGACACGAT
GACCTACGTGACGGCACTGCTGCCGGTCGCTCAGGGGGTGGCGGTCTACGCCGCGCTCAAACGGTCGGCCGACACCACCT
TCGACGACCGGTCCCGCGGTCAGGTCATGGCCGACACGCTGGTCGAGCGGGTGACCGGCTGCCCCGCCGAGGTGGCCGTC
CCGGTGGCGGTGAACCTGGTGATCACCGACGAAGCGTTGCTCGGCGGCGACCCGGAACCGGCGGTGATCAGCGGGTATGG
TCCGGTACCCGCGGCGGTGGGCCGCCGCCTCGTCGACGCCGCGGTCACCGACAAGCGGTCGAAGGCCACGTTGCGCCGGT
TGTACCGGCGGCCGCGCTCAGGTGCGTTGGTGGCGATGGAGTCGCGGTCACGGTGCTTCCCGAAGGGCTTGGCCGCGTTC
ATCGACCTGCGGGACCAGACCTGCCGCACTCCGTACTGCGACGCCCCGATCCGCCACCACGACCACGCACGGCCACACCG
CGCCGGGGGACCGACCAGCGCCGCCAATGGGCTCGGCGAGTGCGCAGCGTGCAACTACGCCAAGGAAGCCCCGGGGTGGC
GGGTGGCCACTTCATGCGACGCCGAAGGCCGCCATCGCGCGACGTTCACCACACCCACCGGCACGCAGTATCACTCGACA
GCGCCACCATCACCCGGGATGACCGTCGTGAACCTCAGCGACCTCGAGGTGCGGATCGGCATCGAACTGGCCGCCTTCCG
CCACGCCGCCTAG

Upstream 100 bases:

>100_bases
GGTAGGGCGTGCCCAGGTACTTGCGGGCTGGGCTTGCGAAGCAGTGCGAGCAGGCCTTCCGGCAGGGTTGTGGCGATGGC
ACCCGTAGCACTGGGATCGC

Downstream 100 bases:

>100_bases
TTCGGGGGCGACGGGAGTGGTCCGTCGGTCGGCTCCGGCGGTGCGAAGTTCCAGTTGTCCGGGTTCTTCGGCGAGTACAC
GACGGGGAACAACGCGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease; HNH Endonuclease Domain-Containing Protein

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSDHADILEHMFEASETALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAGVPANKRGRGLASEVALARHDCPNK
GGRHLGFARALVHEMPHTLAALECGALSEWRATLIVRESACLSVEDRRMLDAELCRDVSRLEGLGDKRIEAEAKRIAYRL
DPQAVVDRAAKAASERTVTCRPAPDTMTYVTALLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPAEVAV
PVAVNLVITDEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYRRPRSGALVAMESRSRCFPKGLAAF
IDLRDQTCRTPYCDAPIRHHDHARPHRAGGPTSAANGLGECAACNYAKEAPGWRVATSCDAEGRHRATFTTPTGTQYHST
APPSPGMTVVNLSDLEVRIGIELAAFRHAA

Sequences:

>Translated_430_residues
MSDHADILEHMFEASETALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAGVPANKRGRGLASEVALARHDCPNK
GGRHLGFARALVHEMPHTLAALECGALSEWRATLIVRESACLSVEDRRMLDAELCRDVSRLEGLGDKRIEAEAKRIAYRL
DPQAVVDRAAKAASERTVTCRPAPDTMTYVTALLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPAEVAV
PVAVNLVITDEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYRRPRSGALVAMESRSRCFPKGLAAF
IDLRDQTCRTPYCDAPIRHHDHARPHRAGGPTSAANGLGECAACNYAKEAPGWRVATSCDAEGRHRATFTTPTGTQYHST
APPSPGMTVVNLSDLEVRIGIELAAFRHAA
>Mature_429_residues
SDHADILEHMFEASETALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAGVPANKRGRGLASEVALARHDCPNKG
GRHLGFARALVHEMPHTLAALECGALSEWRATLIVRESACLSVEDRRMLDAELCRDVSRLEGLGDKRIEAEAKRIAYRLD
PQAVVDRAAKAASERTVTCRPAPDTMTYVTALLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPAEVAVP
VAVNLVITDEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYRRPRSGALVAMESRSRCFPKGLAAFI
DLRDQTCRTPYCDAPIRHHDHARPHRAGGPTSAANGLGECAACNYAKEAPGWRVATSCDAEGRHRATFTTPTGTQYHSTA
PPSPGMTVVNLSDLEVRIGIELAAFRHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46001; Mature: 45870

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHADILEHMFEASETALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAGVPAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KRGRGLASEVALARHDCPNKGGRHLGFARALVHEMPHTLAALECGALSEWRATLIVRESA
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCC
CLSVEDRRMLDAELCRDVSRLEGLGDKRIEAEAKRIAYRLDPQAVVDRAAKAASERTVTC
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEE
RPAPDTMTYVTALLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPAEVAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
PVAVNLVITDEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYRRPRS
EEEEEEEEECHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
GALVAMESRSRCFPKGLAAFIDLRDQTCRTPYCDAPIRHHDHARPHRAGGPTSAANGLGE
CCEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCH
CAACNYAKEAPGWRVATSCDAEGRHRATFTTPTGTQYHSTAPPSPGMTVVNLSDLEVRIG
HHHCCCHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEEE
IELAAFRHAA
EEEEHHHCCC
>Mature Secondary Structure 
SDHADILEHMFEASETALIERIAALERAKSAAAAAQARATALLDEKRRAAEAAAGVPAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KRGRGLASEVALARHDCPNKGGRHLGFARALVHEMPHTLAALECGALSEWRATLIVRESA
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCC
CLSVEDRRMLDAELCRDVSRLEGLGDKRIEAEAKRIAYRLDPQAVVDRAAKAASERTVTC
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEE
RPAPDTMTYVTALLPVAQGVAVYAALKRSADTTFDDRSRGQVMADTLVERVTGCPAEVAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
PVAVNLVITDEALLGGDPEPAVISGYGPVPAAVGRRLVDAAVTDKRSKATLRRLYRRPRS
EEEEEEEEECHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
GALVAMESRSRCFPKGLAAFIDLRDQTCRTPYCDAPIRHHDHARPHRAGGPTSAANGLGE
CCEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCH
CAACNYAKEAPGWRVATSCDAEGRHRATFTTPTGTQYHSTAPPSPGMTVVNLSDLEVRIG
HHHCCCHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEEE
IELAAFRHAA
EEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA