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The map label for this gene is 108798381

Identifier: 108798381

GI number: 108798381

Start: 1527600

End: 1527878

Strand: Direct

Name: 108798381

Synonym: Mmcs_1410

Alternate gene names: NA

Gene position: 1527600-1527878 (Clockwise)

Preceding gene: 108798380

Following gene: 108798385

Centisome position: 26.77

GC content: 69.89

Gene sequence:

>279_bases
ATGTCTGTGGAGACATGCCTCGAGAGGGTGTTACCGGAATTGCCGTGCCACGTCGGCGATCCCGACCTGTGGTTCGCCGA
GAGTCCCGGGGACCTCGAACGTGCCAAGACGCTGTGTGCGGAGTGCCCGGTGCGCCGGGAGTGCCTCGCCGCGGCGCTGG
AGCGTCAGGAGCCGTGGGGTGTCTGGGGCGGCGAGATCTTCGAACGAGGCACCATCGTCGCGCGTAAGCGTCCGCGGGGA
CGCCCGCGCAAGACCGAGCGGGACCCGGCGGCTGCCTAG

Upstream 100 bases:

>100_bases
GCCACAGTCTTTTTCAGGGGAAGCCCTCCACGAAGACCTGGTCCCGGATCCAGCCAAAGACAGATGGCCGAGGAATCAAC
GACCAGGAAGCAGGAAGTTC

Downstream 100 bases:

>100_bases
CCGCCGGGCCGCTCAGGCCGCGTCCTCCCGGAAGCCCGGAATCAGTTCGGTGGCAATGGCTTTCACCGGGACGTGGGCGT
CGAGCTGGCACGAGATCGCC

Product: transcription factor WhiB

Products: NA

Alternate protein names: Transcription Factor WhiB-Like Protein; WhiB-Family Transcriptional Regulator; Transcriptional Regulator; WhiB Family Transcriptional Regulator; WhiB Family Regulatory Protein; Transcriptional Regulator WhiB; Whib-Like Transcriptional Regulator; Transcriptional Regulatory

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MSVETCLERVLPELPCHVGDPDLWFAESPGDLERAKTLCAECPVRRECLAAALERQEPWGVWGGEIFERGTIVARKRPRG
RPRKTERDPAAA

Sequences:

>Translated_92_residues
MSVETCLERVLPELPCHVGDPDLWFAESPGDLERAKTLCAECPVRRECLAAALERQEPWGVWGGEIFERGTIVARKRPRG
RPRKTERDPAAA
>Mature_91_residues
SVETCLERVLPELPCHVGDPDLWFAESPGDLERAKTLCAECPVRRECLAAALERQEPWGVWGGEIFERGTIVARKRPRGR
PRKTERDPAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10341; Mature: 10210

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00354 HMGI_Y

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVETCLERVLPELPCHVGDPDLWFAESPGDLERAKTLCAECPVRRECLAAALERQEPWG
CCHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
VWGGEIFERGTIVARKRPRGRPRKTERDPAAA
CCCHHHHHCCCCEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVETCLERVLPELPCHVGDPDLWFAESPGDLERAKTLCAECPVRRECLAAALERQEPWG
CHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
VWGGEIFERGTIVARKRPRGRPRKTERDPAAA
CCCHHHHHCCCCEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA