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The map label for this gene is 108798141

Identifier: 108798141

GI number: 108798141

Start: 1266077

End: 1267852

Strand: Direct

Name: 108798141

Synonym: Mmcs_1170

Alternate gene names: NA

Gene position: 1266077-1267852 (Clockwise)

Preceding gene: 108798139

Following gene: 108798144

Centisome position: 22.19

GC content: 68.24

Gene sequence:

>1776_bases
ATGCAGCCTGACTACGACGTCCTCATCATCGGTTCGGGGTTCGGTGGCAGCGTCACCGCGCTGCGGCTCACCGAGAAGGG
CTATCGGGTCGGCGTACTCGAAGCGGGCCGCCGCTTCGCCGACGAGGACTTCGCCAAGACGTCGTGGGATCTGCGGAACT
TCCTGTGGGCGCCGCAACTGGGCTGCTTCGGCATCCAGCGCATTCATCTGCTCCGCGACGTCCTCATCCTGGCCGGCGCG
GGTGTCGGCGGCGGATCGCTCAACTACGCCAACACCCTCTACGTCCCGCGTGAGCCGTTCTTCAACGACCCGCAGTGGAA
GCACATCACCGACTGGAACGAAGAGCTGCTGCCGCACTACGAGCAGGCCCAGCGGATGCTCGGCGTGGTCACGAACCCGA
CGTTCACCGACGCCGACCGCGTCGTGAAGGAAGTCGCCGAGGACATGGGCGTCGGCGACACCTTCGTCCCGACGCCGGTG
GGCGTGTTCTTCGGCCCCGACGGGCAGAAGGCCCCGGGCAAGACGGTGCCCGACCCCTACTTCGGCGGTGTCGGCCCGGC
CCGCAGGGGTTGCATCGAGGTCGGCGAATGCATGACGGGCTGCCGCCACAACGGCAAGAACACCCTGGTGAAGAACTACC
TCTACCTCGCCGAGCGGGCGGGCACCGAGGTACATCCGCTGACCACCGTGACCAGCTTCGAACAGCGCGCCGACGGCGTC
TGGGAGGTGAGCACCGTGCGCACCGGCCGCAAGGTGCGCCGCCAGAAGCGCACCTTCACCGCCAACCATGTCGTCCTTGC
GGCGGGCACGTTCGGCACTCAGAAGCTGCTGTTCAAGATGCGTGACGCCGGGAAGCTCCCCGAGCTGTCCGACCGGCTGG
GCATGCTGACCCGGACCAACTCGGAATCCATCGTCGGCGCCGGGAAATTCGAGGTCACCGACGACCTCGACCTCACCCAC
GGCGTGGCGATCACTTCGTCGATCCACCCGACCTCCGACACCCACATCGAACCGGTGCGCTACGGCAAGGGCTCCAATGC
GATGGGGCTGCTGCAGACACTGATGACCGACGGCGCCGGCCCGGAGGGCACCGACGTGCCGCGCTGGAAGCAGCTGTTCC
ACAACGCCAAAGCGGATCCGCGCGGCACCATGCGACTGCTCAACGTGCGGCGCTGGAGCGAACGGACGCTGATCGCGCTG
GTCATGCAGAACCTCGACAACTCCATCACCACCTTCACCAAGCGCACGAAGTTCGGCACCCGCCGGCTGACGAGCAAACA
GGGCCACGGTGAGCCGAACCCGACGTGGATCCCGGTGGGCAACGAGGTGACGCGGCGGATCGCCGAGAAGATCGACGGCG
TCGCGGGCGGCACCTGGGGCGAATTGTTCAACATCCCCCTGACGGCACACTTCCTCGGCGGCGCCGCCATCGGCGACAGC
GCCGAGCACGGAGTCATCGACCCCTACCACCGCGTCTACAACTATCCGACGCTGTACGTCACCGACGGGGCGGCGATCTC
GGCCAACCTCGGCGTCAACCCGTCCCTGACCATCAGCGCACAGGCGGAACGGGCGGCCTCGCTGTGGCCGAACAAGGGCG
AAGAGGATCTGCGACCCGCACAGGGCGAGGGGTACCGCCGCCTGGACCCGATCCGCCCTGCGCAGCCCGTGGTGCCCGCC
GGTGCGCCCGCGGCCCTGGACTGGAACGCCAGCCGCGAGGAGGTCAACCGCCGCGACCCCACCACCGCCGAGGCTTCCGA
GGCGCGCGGCGCCTGA

Upstream 100 bases:

>100_bases
CACAGAATCGCGTTCGAGCGGCCCTCGGAACGCGATTCTGTGTCTGCTCGCAGAAGAGGCGGTTCTGGATAGTTACCCAT
TGGTAACCCATACTGGTGTG

Downstream 100 bases:

>100_bases
CCTCAGGTCGGTTTGGTCAGACGACGACGCAGCGGTTCGCGGCCCGGCGGCTGCGCCGGTGTGGGCAGCAGCGGCTTGCG
CTTCTGCACCTTGACCGTCG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Glucose-Methanol-Choline Oxidoreductase; FAD Dependent Oxidoreductase; GMC Oxidoreductase; Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; Choline Dehydrogenase; Cholesterol Oxidase ChoD; Oxidase; Oxidoreductase Glucose-Methanol-Choline Family; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Gmc Oxidoreductase Family Protein; Ferredoxin Domain Gmc Oxidoreductase; Cholesterol Oxidase ChoD; Cholesterol-O2 Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; GMC Oxidoreductase Family Protein; Cholesterol Oxidase Chod; GMC Oxidoreductase Family

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MQPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFADEDFAKTSWDLRNFLWAPQLGCFGIQRIHLLRDVLILAGA
GVGGGSLNYANTLYVPREPFFNDPQWKHITDWNEELLPHYEQAQRMLGVVTNPTFTDADRVVKEVAEDMGVGDTFVPTPV
GVFFGPDGQKAPGKTVPDPYFGGVGPARRGCIEVGECMTGCRHNGKNTLVKNYLYLAERAGTEVHPLTTVTSFEQRADGV
WEVSTVRTGRKVRRQKRTFTANHVVLAAGTFGTQKLLFKMRDAGKLPELSDRLGMLTRTNSESIVGAGKFEVTDDLDLTH
GVAITSSIHPTSDTHIEPVRYGKGSNAMGLLQTLMTDGAGPEGTDVPRWKQLFHNAKADPRGTMRLLNVRRWSERTLIAL
VMQNLDNSITTFTKRTKFGTRRLTSKQGHGEPNPTWIPVGNEVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAAIGDS
AEHGVIDPYHRVYNYPTLYVTDGAAISANLGVNPSLTISAQAERAASLWPNKGEEDLRPAQGEGYRRLDPIRPAQPVVPA
GAPAALDWNASREEVNRRDPTTAEASEARGA

Sequences:

>Translated_591_residues
MQPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFADEDFAKTSWDLRNFLWAPQLGCFGIQRIHLLRDVLILAGA
GVGGGSLNYANTLYVPREPFFNDPQWKHITDWNEELLPHYEQAQRMLGVVTNPTFTDADRVVKEVAEDMGVGDTFVPTPV
GVFFGPDGQKAPGKTVPDPYFGGVGPARRGCIEVGECMTGCRHNGKNTLVKNYLYLAERAGTEVHPLTTVTSFEQRADGV
WEVSTVRTGRKVRRQKRTFTANHVVLAAGTFGTQKLLFKMRDAGKLPELSDRLGMLTRTNSESIVGAGKFEVTDDLDLTH
GVAITSSIHPTSDTHIEPVRYGKGSNAMGLLQTLMTDGAGPEGTDVPRWKQLFHNAKADPRGTMRLLNVRRWSERTLIAL
VMQNLDNSITTFTKRTKFGTRRLTSKQGHGEPNPTWIPVGNEVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAAIGDS
AEHGVIDPYHRVYNYPTLYVTDGAAISANLGVNPSLTISAQAERAASLWPNKGEEDLRPAQGEGYRRLDPIRPAQPVVPA
GAPAALDWNASREEVNRRDPTTAEASEARGA
>Mature_591_residues
MQPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFADEDFAKTSWDLRNFLWAPQLGCFGIQRIHLLRDVLILAGA
GVGGGSLNYANTLYVPREPFFNDPQWKHITDWNEELLPHYEQAQRMLGVVTNPTFTDADRVVKEVAEDMGVGDTFVPTPV
GVFFGPDGQKAPGKTVPDPYFGGVGPARRGCIEVGECMTGCRHNGKNTLVKNYLYLAERAGTEVHPLTTVTSFEQRADGV
WEVSTVRTGRKVRRQKRTFTANHVVLAAGTFGTQKLLFKMRDAGKLPELSDRLGMLTRTNSESIVGAGKFEVTDDLDLTH
GVAITSSIHPTSDTHIEPVRYGKGSNAMGLLQTLMTDGAGPEGTDVPRWKQLFHNAKADPRGTMRLLNVRRWSERTLIAL
VMQNLDNSITTFTKRTKFGTRRLTSKQGHGEPNPTWIPVGNEVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAAIGDS
AEHGVIDPYHRVYNYPTLYVTDGAAISANLGVNPSLTISAQAERAASLWPNKGEEDLRPAQGEGYRRLDPIRPAQPVVPA
GAPAALDWNASREEVNRRDPTTAEASEARGA

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64627; Mature: 64627

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFADEDFAKTSWDLRNFLWAPQL
CCCCCCEEEEECCCCCCEEEEEEECCCCEEEHHHHCCHHCCHHHHHHHHHHHHHHCCCCC
GCFGIQRIHLLRDVLILAGAGVGGGSLNYANTLYVPREPFFNDPQWKHITDWNEELLPHY
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCH
EQAQRMLGVVTNPTFTDADRVVKEVAEDMGVGDTFVPTPVGVFFGPDGQKAPGKTVPDPY
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
FGGVGPARRGCIEVGECMTGCRHNGKNTLVKNYLYLAERAGTEVHPLTTVTSFEQRADGV
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
WEVSTVRTGRKVRRQKRTFTANHVVLAAGTFGTQKLLFKMRDAGKLPELSDRLGMLTRTN
EEEHHHHHHHHHHHHHHHEECCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHCCEEECC
SESIVGAGKFEVTDDLDLTHGVAITSSIHPTSDTHIEPVRYGKGSNAMGLLQTLMTDGAG
CCCEEECCCEEECCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCC
PEGTDVPRWKQLFHNAKADPRGTMRLLNVRRWSERTLIALVMQNLDNSITTFTKRTKFGT
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCH
RRLTSKQGHGEPNPTWIPVGNEVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAAIGDS
HHHCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHEECCEEEEECCCCCCCCC
AEHGVIDPYHRVYNYPTLYVTDGAAISANLGVNPSLTISAQAERAASLWPNKGEEDLRPA
CCCCCCCCHHHHHCCCEEEEECCCEEEECCCCCCCEEEECCHHHHHHCCCCCCHHHCCCC
QGEGYRRLDPIRPAQPVVPAGAPAALDWNASREEVNRRDPTTAEASEARGA
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure
MQPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFADEDFAKTSWDLRNFLWAPQL
CCCCCCEEEEECCCCCCEEEEEEECCCCEEEHHHHCCHHCCHHHHHHHHHHHHHHCCCCC
GCFGIQRIHLLRDVLILAGAGVGGGSLNYANTLYVPREPFFNDPQWKHITDWNEELLPHY
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCH
EQAQRMLGVVTNPTFTDADRVVKEVAEDMGVGDTFVPTPVGVFFGPDGQKAPGKTVPDPY
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
FGGVGPARRGCIEVGECMTGCRHNGKNTLVKNYLYLAERAGTEVHPLTTVTSFEQRADGV
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
WEVSTVRTGRKVRRQKRTFTANHVVLAAGTFGTQKLLFKMRDAGKLPELSDRLGMLTRTN
EEEHHHHHHHHHHHHHHHEECCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHCCEEECC
SESIVGAGKFEVTDDLDLTHGVAITSSIHPTSDTHIEPVRYGKGSNAMGLLQTLMTDGAG
CCCEEECCCEEECCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCC
PEGTDVPRWKQLFHNAKADPRGTMRLLNVRRWSERTLIALVMQNLDNSITTFTKRTKFGT
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCH
RRLTSKQGHGEPNPTWIPVGNEVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAAIGDS
HHHCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHEECCEEEEECCCCCCCCC
AEHGVIDPYHRVYNYPTLYVTDGAAISANLGVNPSLTISAQAERAASLWPNKGEEDLRPA
CCCCCCCCHHHHHCCCEEEEECCCEEEECCCCCCCEEEECCHHHHHHCCCCCCHHHCCCC
QGEGYRRLDPIRPAQPVVPAGAPAALDWNASREEVNRRDPTTAEASEARGA
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA