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The map label for this gene is blc [H]

Identifier: 108798129

GI number: 108798129

Start: 1255323

End: 1255838

Strand: Direct

Name: blc [H]

Synonym: Mmcs_1158

Alternate gene names: 108798129

Gene position: 1255323-1255838 (Clockwise)

Preceding gene: 108798128

Following gene: 108798130

Centisome position: 22.0

GC content: 64.53

Gene sequence:

>516_bases
TTGGGCCAACGATCTGCTGTCACCTCCGTCGGATCACTCGACCTCGATCGCTATTGCGGCCTGTGGTACGAGATCGGCAG
GCTCCCACTCCGATGGGAGGACGACACCGCCGCCGACATCACCGCCGACTACACGCTCGAGGACGACGGAAGCGTGCGCG
TCGTCAACCGTTGCATCGACAAGAGCGGTGCGCCGTCGCAGGCGATCGGCCGCGCGACACCGGTGCACGGCAAACCGGGC
CGGTTGCAGGTCTCGTTCCTTCCGGAGTTGCTGCGGTGGGTGCCGTTCACGAAGGGCGACTATTGGGTCTTGAAGATCGA
TGACGCCTACACGGTCGCCCTTGTGGGCACACCCGACCACAAGAACCTGTGGCTCATGGCTCGCGAACCGCGCATCGATC
CCGCCACCGAAGCGGCCTACCTGGACGAAGCGACCCGGCAGGGGTTCGATCTCGAACGTTGGATCACCCCCGTGCAGTCG
GGTCAGCACGTCACCGACCATCAGCTCAAAGGCTGA

Upstream 100 bases:

>100_bases
CAGTACGAGTTCATCCGCAGCGTCGTCGGCAACGCCAGTGAGACGCTGAGGAAGCAGAGCGACGACAAGCCAGATGCTCA
GTAGGAAGAAGGAGACCACG

Downstream 100 bases:

>100_bases
CCCCGGTTCGCGACGTGCGTTGAGCGAAAATGGAGGAGCGATGGCGCAATTGGTGACCCGTCGTGCCGTACTGGTCGCGC
TCGGTGCGGTCGCCGCGGGC

Product: Lipocalin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MGQRSAVTSVGSLDLDRYCGLWYEIGRLPLRWEDDTAADITADYTLEDDGSVRVVNRCIDKSGAPSQAIGRATPVHGKPG
RLQVSFLPELLRWVPFTKGDYWVLKIDDAYTVALVGTPDHKNLWLMAREPRIDPATEAAYLDEATRQGFDLERWITPVQS
GQHVTDHQLKG

Sequences:

>Translated_171_residues
MGQRSAVTSVGSLDLDRYCGLWYEIGRLPLRWEDDTAADITADYTLEDDGSVRVVNRCIDKSGAPSQAIGRATPVHGKPG
RLQVSFLPELLRWVPFTKGDYWVLKIDDAYTVALVGTPDHKNLWLMAREPRIDPATEAAYLDEATRQGFDLERWITPVQS
GQHVTDHQLKG
>Mature_170_residues
GQRSAVTSVGSLDLDRYCGLWYEIGRLPLRWEDDTAADITADYTLEDDGSVRVVNRCIDKSGAPSQAIGRATPVHGKPGR
LQVSFLPELLRWVPFTKGDYWVLKIDDAYTVALVGTPDHKNLWLMAREPRIDPATEAAYLDEATRQGFDLERWITPVQSG
QHVTDHQLKG

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=149, Percent_Identity=28.1879194630872, Blast_Score=71, Evalue=6e-13,
Organism=Escherichia coli, GI1790592, Length=159, Percent_Identity=38.3647798742138, Blast_Score=87, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19167; Mature: 19036

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQRSAVTSVGSLDLDRYCGLWYEIGRLPLRWEDDTAADITADYTLEDDGSVRVVNRCID
CCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCEEHHHHHHC
KSGAPSQAIGRATPVHGKPGRLQVSFLPELLRWVPFTKGDYWVLKIDDAYTVALVGTPDH
CCCCCCHHHCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCC
KNLWLMAREPRIDPATEAAYLDEATRQGFDLERWITPVQSGQHVTDHQLKG
CCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQRSAVTSVGSLDLDRYCGLWYEIGRLPLRWEDDTAADITADYTLEDDGSVRVVNRCID
CCCHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCEEHHHHHHC
KSGAPSQAIGRATPVHGKPGRLQVSFLPELLRWVPFTKGDYWVLKIDDAYTVALVGTPDH
CCCCCCHHHCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCC
KNLWLMAREPRIDPATEAAYLDEATRQGFDLERWITPVQSGQHVTDHQLKG
CCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]