| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108798130
Identifier: 108798130
GI number: 108798130
Start: 1255858
End: 1256472
Strand: Direct
Name: 108798130
Synonym: Mmcs_1159
Alternate gene names: NA
Gene position: 1255858-1256472 (Clockwise)
Preceding gene: 108798129
Following gene: 108798132
Centisome position: 22.01
GC content: 68.46
Gene sequence:
>615_bases TTGAGCGAAAATGGAGGAGCGATGGCGCAATTGGTGACCCGTCGTGCCGTACTGGTCGCGCTCGGTGCGGTCGCCGCGGG CAGCGTCCTCGGTGTCGGGTATGTGTTCCGCAACATCTTCGATTCGCCCGCCCCGGAGTCCCGGCTCACGGGTGGCCCCG GCGGCGGGATGATGGGTATGGACCCCGCGGACATGCGTACGTACATGGAGATGTTCAACCGCCACAACGAGATCACGCGC ACTGTCGAGGAGATCCCCGGCGGCGTGCGCACCGTGACCGAGTCGGACTCGGCCGATCTCACCGCGCAACTTCAGGCGCA CGTGTCGCGGATGTACTCGCGGGTCGGGGAGGGCGCCGAGGTGATGTGCATGAGCAGCAGCCTGCCGACACTGTTCCGCA ACGCAGACGGCTACCGACGCCGGCTCACCCTGACACCGACCGGCGTCGCCGCGGAGGAGACCGCCGACGATCCCGCGATC GTCCAAGCCATCCGCGACCATGCCCGGGAGGTCACCGGATTCGTCCGCGACGGGATGCCGGCGATGATGGGACCGATGAT GGGGCGCGGCGGGATGATGCACGGCGGGCACGGCGGGATGATGGGGCCGCGCTGA
Upstream 100 bases:
>100_bases CGGCAGGGGTTCGATCTCGAACGTTGGATCACCCCCGTGCAGTCGGGTCAGCACGTCACCGACCATCAGCTCAAAGGCTG ACCCCGGTTCGCGACGTGCG
Downstream 100 bases:
>100_bases GGTCAGCCTTCGTGCGGGGTCTTCCGCATGAAGTTGTAGAGGTGGTGGCTGTACACCTGCAGCCCCAGCACCGCTTCGAC GTACTCACGACGCTCGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSENGGAMAQLVTRRAVLVALGAVAAGSVLGVGYVFRNIFDSPAPESRLTGGPGGGMMGMDPADMRTYMEMFNRHNEITR TVEEIPGGVRTVTESDSADLTAQLQAHVSRMYSRVGEGAEVMCMSSSLPTLFRNADGYRRRLTLTPTGVAAEETADDPAI VQAIRDHAREVTGFVRDGMPAMMGPMMGRGGMMHGGHGGMMGPR
Sequences:
>Translated_204_residues MSENGGAMAQLVTRRAVLVALGAVAAGSVLGVGYVFRNIFDSPAPESRLTGGPGGGMMGMDPADMRTYMEMFNRHNEITR TVEEIPGGVRTVTESDSADLTAQLQAHVSRMYSRVGEGAEVMCMSSSLPTLFRNADGYRRRLTLTPTGVAAEETADDPAI VQAIRDHAREVTGFVRDGMPAMMGPMMGRGGMMHGGHGGMMGPR >Mature_203_residues SENGGAMAQLVTRRAVLVALGAVAAGSVLGVGYVFRNIFDSPAPESRLTGGPGGGMMGMDPADMRTYMEMFNRHNEITRT VEEIPGGVRTVTESDSADLTAQLQAHVSRMYSRVGEGAEVMCMSSSLPTLFRNADGYRRRLTLTPTGVAAEETADDPAIV QAIRDHAREVTGFVRDGMPAMMGPMMGRGGMMHGGHGGMMGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21655; Mature: 21524
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 9.8 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 9.4 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENGGAMAQLVTRRAVLVALGAVAAGSVLGVGYVFRNIFDSPAPESRLTGGPGGGMMGM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DPADMRTYMEMFNRHNEITRTVEEIPGGVRTVTESDSADLTAQLQAHVSRMYSRVGEGAE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCE VMCMSSSLPTLFRNADGYRRRLTLTPTGVAAEETADDPAIVQAIRDHAREVTGFVRDGMP EEEECCCCCHHHHCCCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH AMMGPMMGRGGMMHGGHGGMMGPR HHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SENGGAMAQLVTRRAVLVALGAVAAGSVLGVGYVFRNIFDSPAPESRLTGGPGGGMMGM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DPADMRTYMEMFNRHNEITRTVEEIPGGVRTVTESDSADLTAQLQAHVSRMYSRVGEGAE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCE VMCMSSSLPTLFRNADGYRRRLTLTPTGVAAEETADDPAIVQAIRDHAREVTGFVRDGMP EEEECCCCCHHHHCCCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH AMMGPMMGRGGMMHGGHGGMMGPR HHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA