Click here to switch to the map view.

The map label for this gene is 108798070

Identifier: 108798070

GI number: 108798070

Start: 1196736

End: 1197407

Strand: Direct

Name: 108798070

Synonym: Mmcs_1098

Alternate gene names: NA

Gene position: 1196736-1197407 (Clockwise)

Preceding gene: 108798069

Following gene: 108798071

Centisome position: 20.98

GC content: 69.2

Gene sequence:

>672_bases
ATGACAGTGGGCCCTCCGAACGCCGACGATTCGGCCTTCTGTCCCGGCGACCACCGCGGTGCGCCCGGGTTCTGTCCGAA
CTGTGGCGCTCCGCTGGAGGTGTCACCCGAACCGGAGGGCCGTCGCCGATGGTGGCATTCGACGGCCCGACGGGCCGCGG
TGGTGGCCACGATCGTGGCGGTCGCCGTTGGTTTGGCGGTCCTGATCGTCGTCGTCGACGCCAGGCGAAGCGCCGACCAC
ATGGCCCCGTCCGAGCAGGCGGCGGTCCGTCAGTGGTGGTCGACAGCTCAGCCGGCGATCACCGACCTGCAGGAGGCGCT
GTACGACTCCGAGAGCTCGCTGCGCCGAATGAACGCGTCGGCACTCGCGTCGGCATGTCAGCGGATGCACGACGGCGCGG
CGGTGGACGTTCCCGCCCAATTGCCTTCTCCTGACCGCGATCTGACCGCGGAACTCACCGCCGCCGCCGAAGACGCCCAC
ACGGCGGCACACATGTGCCTTGCGGTGGTCGCCAAGTCACCGCACAACTACGAAGGCGAGTTCACCGCGAACCTGGATCA
GGCCGAGAAGCAGATGAGGGCGGCGATGACGCTCGTCAACCGCATCCTGACCGCGCAGACGCCGGGGGAGAGGCTCGGGT
CAGCAAGGGACCGCGCCGTAGCCGAGGGCTGA

Upstream 100 bases:

>100_bases
GCAGCCATGGGCGCGGCGGATTCGCCGGCATGCTGCTGGGATCCGTCAGCGCGGCCGTCGCCCAGTCGGTCGACGTCCCC
GTGATCGTGGTGCGGCAGCA

Downstream 100 bases:

>100_bases
GACGACACGATGAGCGACTACTGGCTGAACGTGGCCCTGGTATTCGCGCTCATACTGGTCAACGGGCTGCTGGCGGGAAG
CGAAGCAGCGTTCATCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTVGPPNADDSAFCPGDHRGAPGFCPNCGAPLEVSPEPEGRRRWWHSTARRAAVVATIVAVAVGLAVLIVVVDARRSADH
MAPSEQAAVRQWWSTAQPAITDLQEALYDSESSLRRMNASALASACQRMHDGAAVDVPAQLPSPDRDLTAELTAAAEDAH
TAAHMCLAVVAKSPHNYEGEFTANLDQAEKQMRAAMTLVNRILTAQTPGERLGSARDRAVAEG

Sequences:

>Translated_223_residues
MTVGPPNADDSAFCPGDHRGAPGFCPNCGAPLEVSPEPEGRRRWWHSTARRAAVVATIVAVAVGLAVLIVVVDARRSADH
MAPSEQAAVRQWWSTAQPAITDLQEALYDSESSLRRMNASALASACQRMHDGAAVDVPAQLPSPDRDLTAELTAAAEDAH
TAAHMCLAVVAKSPHNYEGEFTANLDQAEKQMRAAMTLVNRILTAQTPGERLGSARDRAVAEG
>Mature_222_residues
TVGPPNADDSAFCPGDHRGAPGFCPNCGAPLEVSPEPEGRRRWWHSTARRAAVVATIVAVAVGLAVLIVVVDARRSADHM
APSEQAAVRQWWSTAQPAITDLQEALYDSESSLRRMNASALASACQRMHDGAAVDVPAQLPSPDRDLTAELTAAAEDAHT
AAHMCLAVVAKSPHNYEGEFTANLDQAEKQMRAAMTLVNRILTAQTPGERLGSARDRAVAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23685; Mature: 23554

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGPPNADDSAFCPGDHRGAPGFCPNCGAPLEVSPEPEGRRRWWHSTARRAAVVATIVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VAVGLAVLIVVVDARRSADHMAPSEQAAVRQWWSTAQPAITDLQEALYDSESSLRRMNAS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHH
ALASACQRMHDGAAVDVPAQLPSPDRDLTAELTAAAEDAHTAAHMCLAVVAKSPHNYEGE
HHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FTANLDQAEKQMRAAMTLVNRILTAQTPGERLGSARDRAVAEG
EECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCC
>Mature Secondary Structure 
TVGPPNADDSAFCPGDHRGAPGFCPNCGAPLEVSPEPEGRRRWWHSTARRAAVVATIVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VAVGLAVLIVVVDARRSADHMAPSEQAAVRQWWSTAQPAITDLQEALYDSESSLRRMNAS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHH
ALASACQRMHDGAAVDVPAQLPSPDRDLTAELTAAAEDAHTAAHMCLAVVAKSPHNYEGE
HHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FTANLDQAEKQMRAAMTLVNRILTAQTPGERLGSARDRAVAEG
EECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA