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The map label for this gene is 108798060

Identifier: 108798060

GI number: 108798060

Start: 1186888

End: 1187727

Strand: Direct

Name: 108798060

Synonym: Mmcs_1087

Alternate gene names: NA

Gene position: 1186888-1187727 (Clockwise)

Preceding gene: 108798058

Following gene: 108798062

Centisome position: 20.8

GC content: 69.52

Gene sequence:

>840_bases
ATGAGCGATGCAGCGCAATTCTCCTCGGTGTTGGTCGGGATCGACGGATCCGACGCGGCCATCGGCGCCGCCACATGGGC
GGTGGAAGAAGCCGTCAGCCGATCGGTGCCCCTGGTGCTCATCGGCGTGATGCCATCCATCCATCCGTCCGCCGAGGAGT
ACCAGCGGGAACTGCACCACGCGGATGTCTCGCTGCGGGCCGCGCGCGCTGCGGTCGAGGCGACCGGTCGTCCGGTGAAG
GTGGACACCGACATCGCGACGGGTCAGCCCGCGGCGGTGCTCATCGCCCGGTCCCGGGATGCGGAGCTCGTGTGCGTCGG
CTCGGTCGGTATCGGCCGATACGAGAGATCCATACTCGGTTCCACGGCAACAGATCTCGCCGAGCAGGCGCACTGCCCGG
TGGCGGTGATCCGCCCTTCCCACAGCGGCGGTCCGAGCGATATCCACTGGATCGTCGCCGCGACGAACGGCACACCCGAG
GACGAGGCGGTCATCGAGGGTGCGATGCGCGAGGCGCGACTCCGCCGGCTACCGGTGCTCCTCCTCGGCCGGCAGCCCCG
GCACGGTAACGGAGGCGACGAACTCGACCGGACCGTCGCGCTCTGGCGGAAGCGCTTCGACGACGTGCACATCTATCCCG
TCGCCTTCCACGGGGACGTCGCGCACTTCGTTCGCGAGCACGACGAACCGATCGAAATGGCGGTGGTGGGCGCCGCCGAC
GCCGGTGAACTCGCGGGGATCCTGGGCCGGCACGGCCGTTCGTCGGTTCTCGTGATCCGGAACGGACAGGACGGGTCAGC
CGGCTCGGGTCAGGGTGCCGGCTCGGGTCAGGGTGCCTGA

Upstream 100 bases:

>100_bases
CGGTGACCTTTTCCGCGGCACAGCGGTCCTCGGACGCTACGGCCGCACCTCGATGAGCGCGAAAGCTGGTGACGACGGCG
CGGCGGGAGGAACGGAATTC

Downstream 100 bases:

>100_bases
GTGCGGTGACCGGCCGGTGCGGCCATCAACCGGACGAAGCGCTCGATGCCGAACCGTTCGAATGTTCGCCTGCGCCGCGC
CGACAGGTGCGGCGCCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: USP Rv2624c [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSDAAQFSSVLVGIDGSDAAIGAATWAVEEAVSRSVPLVLIGVMPSIHPSAEEYQRELHHADVSLRAARAAVEATGRPVK
VDTDIATGQPAAVLIARSRDAELVCVGSVGIGRYERSILGSTATDLAEQAHCPVAVIRPSHSGGPSDIHWIVAATNGTPE
DEAVIEGAMREARLRRLPVLLLGRQPRHGNGGDELDRTVALWRKRFDDVHIYPVAFHGDVAHFVREHDEPIEMAVVGAAD
AGELAGILGRHGRSSVLVIRNGQDGSAGSGQGAGSGQGA

Sequences:

>Translated_279_residues
MSDAAQFSSVLVGIDGSDAAIGAATWAVEEAVSRSVPLVLIGVMPSIHPSAEEYQRELHHADVSLRAARAAVEATGRPVK
VDTDIATGQPAAVLIARSRDAELVCVGSVGIGRYERSILGSTATDLAEQAHCPVAVIRPSHSGGPSDIHWIVAATNGTPE
DEAVIEGAMREARLRRLPVLLLGRQPRHGNGGDELDRTVALWRKRFDDVHIYPVAFHGDVAHFVREHDEPIEMAVVGAAD
AGELAGILGRHGRSSVLVIRNGQDGSAGSGQGAGSGQGA
>Mature_278_residues
SDAAQFSSVLVGIDGSDAAIGAATWAVEEAVSRSVPLVLIGVMPSIHPSAEEYQRELHHADVSLRAARAAVEATGRPVKV
DTDIATGQPAAVLIARSRDAELVCVGSVGIGRYERSILGSTATDLAEQAHCPVAVIRPSHSGGPSDIHWIVAATNGTPED
EAVIEGAMREARLRRLPVLLLGRQPRHGNGGDELDRTVALWRKRFDDVHIYPVAFHGDVAHFVREHDEPIEMAVVGAADA
GELAGILGRHGRSSVLVIRNGQDGSAGSGQGAGSGQGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 29149; Mature: 29018

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAAQFSSVLVGIDGSDAAIGAATWAVEEAVSRSVPLVLIGVMPSIHPSAEEYQRELHH
CCCHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH
ADVSLRAARAAVEATGRPVKVDTDIATGQPAAVLIARSRDAELVCVGSVGIGRYERSILG
CCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHC
STATDLAEQAHCPVAVIRPSHSGGPSDIHWIVAATNGTPEDEAVIEGAMREARLRRLPVL
CHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEE
LLGRQPRHGNGGDELDRTVALWRKRFDDVHIYPVAFHGDVAHFVREHDEPIEMAVVGAAD
EECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHCCCCCEEEEEEECCC
AGELAGILGRHGRSSVLVIRNGQDGSAGSGQGAGSGQGA
CHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDAAQFSSVLVGIDGSDAAIGAATWAVEEAVSRSVPLVLIGVMPSIHPSAEEYQRELHH
CCHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH
ADVSLRAARAAVEATGRPVKVDTDIATGQPAAVLIARSRDAELVCVGSVGIGRYERSILG
CCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHC
STATDLAEQAHCPVAVIRPSHSGGPSDIHWIVAATNGTPEDEAVIEGAMREARLRRLPVL
CHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEE
LLGRQPRHGNGGDELDRTVALWRKRFDDVHIYPVAFHGDVAHFVREHDEPIEMAVVGAAD
EECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHCCCCCEEEEEEECCC
AGELAGILGRHGRSSVLVIRNGQDGSAGSGQGAGSGQGA
CHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]