| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is pntA [H]
Identifier: 108797082
GI number: 108797082
Start: 115664
End: 117187
Strand: Reverse
Name: pntA [H]
Synonym: Mmcs_0101
Alternate gene names: 108797082
Gene position: 117187-115664 (Counterclockwise)
Preceding gene: 108797083
Following gene: 108797081
Centisome position: 2.05
GC content: 69.36
Gene sequence:
>1524_bases ATGCTCATCGCGATACCGCGCGAGTCTCAGCCCGGCGAGACACGCGTAGCCGCCACACCGCAGACGGTCGGGCAGATCAC CAAGCTCGGATACTCGGTCGTCGTCGAATCCGGCGCCGGAGTGGCCTCCAGTTTCCCCGACGCCGCCTACGTCGAGGCCG GGGCGGAGATAGGCGATCCGTGGTCGGCAGATGTGGTGCTGAAGGTCAACGCACCCACCGACGCCGAGATCGCGGCGCTG CGAGACGGGGCGACCCTCGTCGGTCTGATCTCGCCGGCGCTGAACCCCGAGCTCGTCGAGAAGATGTCGACGCGCCGGAT CACCGTGCTGGCCATGGACGCCGTCCCACGGATCTCGCGGGCACAGTCACTCGACGTGCTGTCGTCGATGGCCAACATCG CGGGCTACCGCGCGGTGGTCGAGGCCGCGCACACCTTCGGCCGGTTCTTCACCGGTCAGGTCACCGCCGCGGGCAAGGTG CCGCCGGCCAAGGTGCTCGTCGTCGGCGCCGGCGTGGCGGGTCTGGCCGCCATCGGCGCCGCGGGCAGCCTCGGGGCGAT CGTGCGGGCCACCGATCCACGCCCGGAGGTCGCCGATCAGGTCGCGTCCCTGGGCGGGGAGTACCTGGCCGTCGACCCGG CGGCCGCGGAGGTGTCGGCCACCGGTTACGCCAAGGAGATGGGCGAGGACTACAAGGTCCGCGAGGCGGCGCTGTACGCC GAGCAGTGCAAGGACGTCGACATCATCATCACCACCGCGCTCATCCCGGGCCGGCCGGCCCCGCGGATCATCACCGCCGA CATGGTGGCCTCGATGAAGTCGGGCAGCGTGATCGTCGACATGGCCGCGGCCAACGGCGGCAACGTCGAGGGCACCGTGA AGGACCAGGCGATCGTGACCGACAACGGGGTGACGATCATCGGCTACACCGACCTGGCCGGGCGGCTGCCCGCCACGGCT TCCCAGCTCTACGCCACCAACCTGGTCAACCTGCTCAAACTGCTCACCCCCAACAAGGACGGGCAGCTCACGCTCGACTT CGACGACGTGGTGCAGCGCTCGGTGACCGTGATCCGCGACGGCGAGGTCACCTGGCCGCCGCCACCGGTGCAGGTGTCGG CCGCACCGGCCGCCAAGGCCGCGGCGCCTGTCGAGCACAAACCCGCCAAGCAGCCGATGTCGATGGGCCGCCGACTGGGC ATCACCTTCGCCGCCGCCGCGGCGCTGTTCGTGCTCATCGCCCTTTCACCGGCCGCACTCCAGGTCCACCTGACGGTTTT CGCGCTGGCCATCGTCATCGGCTACTACGTGATCGGCAACGTGCACCATGCCCTGCACACCCCGCTGATGTCGGTGACCA ACGCGATCTCCGGGATCATCGTCGTCGGCGCCCTCCTGCAGATCGGGCACGGCGATCCGGTGGTCACCGCAATCGCCACG GTGGCGATCCTGCTCGCCAGCATCAACGTCTTCGGTGGGTTCTCCGTGACCCGCCGCATGCTGGCCATGTTCTCGAGGAG CTGA
Upstream 100 bases:
>100_bases CGAGCATCGTCTACGTTGGTAAGACCGACTATCTGATGACCGCCTGACCGGCGGCGAGGGCGGCCACGCATTCCGCTCCC GCGGATGCCAAACTGTGCCG
Downstream 100 bases:
>100_bases GGAATGTTGTCACTGGAAACCACCGCGACGGCGGCCTACGTCGTCGCGGCCATCCTGTTCATCCTCGCCCTGGCCGGACT GTCCAAGCACGAGACCTCGA
Product: NAD(P) transhydrogenase subunit alpha
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MLIAIPRESQPGETRVAATPQTVGQITKLGYSVVVESGAGVASSFPDAAYVEAGAEIGDPWSADVVLKVNAPTDAEIAAL RDGATLVGLISPALNPELVEKMSTRRITVLAMDAVPRISRAQSLDVLSSMANIAGYRAVVEAAHTFGRFFTGQVTAAGKV PPAKVLVVGAGVAGLAAIGAAGSLGAIVRATDPRPEVADQVASLGGEYLAVDPAAAEVSATGYAKEMGEDYKVREAALYA EQCKDVDIIITTALIPGRPAPRIITADMVASMKSGSVIVDMAAANGGNVEGTVKDQAIVTDNGVTIIGYTDLAGRLPATA SQLYATNLVNLLKLLTPNKDGQLTLDFDDVVQRSVTVIRDGEVTWPPPPVQVSAAPAAKAAAPVEHKPAKQPMSMGRRLG ITFAAAAALFVLIALSPAALQVHLTVFALAIVIGYYVIGNVHHALHTPLMSVTNAISGIIVVGALLQIGHGDPVVTAIAT VAILLASINVFGGFSVTRRMLAMFSRS
Sequences:
>Translated_507_residues MLIAIPRESQPGETRVAATPQTVGQITKLGYSVVVESGAGVASSFPDAAYVEAGAEIGDPWSADVVLKVNAPTDAEIAAL RDGATLVGLISPALNPELVEKMSTRRITVLAMDAVPRISRAQSLDVLSSMANIAGYRAVVEAAHTFGRFFTGQVTAAGKV PPAKVLVVGAGVAGLAAIGAAGSLGAIVRATDPRPEVADQVASLGGEYLAVDPAAAEVSATGYAKEMGEDYKVREAALYA EQCKDVDIIITTALIPGRPAPRIITADMVASMKSGSVIVDMAAANGGNVEGTVKDQAIVTDNGVTIIGYTDLAGRLPATA SQLYATNLVNLLKLLTPNKDGQLTLDFDDVVQRSVTVIRDGEVTWPPPPVQVSAAPAAKAAAPVEHKPAKQPMSMGRRLG ITFAAAAALFVLIALSPAALQVHLTVFALAIVIGYYVIGNVHHALHTPLMSVTNAISGIIVVGALLQIGHGDPVVTAIAT VAILLASINVFGGFSVTRRMLAMFSRS >Mature_507_residues MLIAIPRESQPGETRVAATPQTVGQITKLGYSVVVESGAGVASSFPDAAYVEAGAEIGDPWSADVVLKVNAPTDAEIAAL RDGATLVGLISPALNPELVEKMSTRRITVLAMDAVPRISRAQSLDVLSSMANIAGYRAVVEAAHTFGRFFTGQVTAAGKV PPAKVLVVGAGVAGLAAIGAAGSLGAIVRATDPRPEVADQVASLGGEYLAVDPAAAEVSATGYAKEMGEDYKVREAALYA EQCKDVDIIITTALIPGRPAPRIITADMVASMKSGSVIVDMAAANGGNVEGTVKDQAIVTDNGVTIIGYTDLAGRLPATA SQLYATNLVNLLKLLTPNKDGQLTLDFDDVVQRSVTVIRDGEVTWPPPPVQVSAAPAAKAAAPVEHKPAKQPMSMGRRLG ITFAAAAALFVLIALSPAALQVHLTVFALAIVIGYYVIGNVHHALHTPLMSVTNAISGIIVVGALLQIGHGDPVVTAIAT VAILLASINVFGGFSVTRRMLAMFSRS
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=532, Percent_Identity=46.8045112781955, Blast_Score=415, Evalue=1e-116, Organism=Homo sapiens, GI122939153, Length=532, Percent_Identity=46.8045112781955, Blast_Score=415, Evalue=1e-116, Organism=Escherichia coli, GI1787887, Length=511, Percent_Identity=63.013698630137, Blast_Score=621, Evalue=1e-179, Organism=Caenorhabditis elegans, GI17550456, Length=515, Percent_Identity=46.4077669902913, Blast_Score=428, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 52186; Mature: 52186
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00836 ALADH_PNT_1 ; PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIAIPRESQPGETRVAATPQTVGQITKLGYSVVVESGAGVASSFPDAAYVEAGAEIGDP CEEEECCCCCCCCCEEEECHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCC WSADVVLKVNAPTDAEIAALRDGATLVGLISPALNPELVEKMSTRRITVLAMDAVPRISR CCCCEEEEECCCCCCHHEEECCCCEEEEECCCCCCHHHHHHHCCCEEEEEEECCCCCHHH AQSLDVLSSMANIAGYRAVVEAAHTFGRFFTGQVTAAGKVPPAKVLVVGAGVAGLAAIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCHHHHHHHCC AGSLGAIVRATDPRPEVADQVASLGGEYLAVDPAAAEVSATGYAKEMGEDYKVREAALYA CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCHHHHCCCCCHHHCCCCHHHHHHHHHH EQCKDVDIIITTALIPGRPAPRIITADMVASMKSGSVIVDMAAANGGNVEGTVKDQAIVT HHCCCCEEEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEEEEECCCCCCCEEECCCEEEE DNGVTIIGYTDLAGRLPATASQLYATNLVNLLKLLTPNKDGQLTLDFDDVVQRSVTVIRD CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHEEEEEC GEVTWPPPPVQVSAAPAAKAAAPVEHKPAKQPMSMGRRLGITFAAAAALFVLIALSPAAL CEEECCCCCCEEECCCCHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHH QVHLTVFALAIVIGYYVIGNVHHALHTPLMSVTNAISGIIVVGALLQIGHGDPVVTAIAT HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VAILLASINVFGGFSVTRRMLAMFSRS HHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLIAIPRESQPGETRVAATPQTVGQITKLGYSVVVESGAGVASSFPDAAYVEAGAEIGDP CEEEECCCCCCCCCEEEECHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCC WSADVVLKVNAPTDAEIAALRDGATLVGLISPALNPELVEKMSTRRITVLAMDAVPRISR CCCCEEEEECCCCCCHHEEECCCCEEEEECCCCCCHHHHHHHCCCEEEEEEECCCCCHHH AQSLDVLSSMANIAGYRAVVEAAHTFGRFFTGQVTAAGKVPPAKVLVVGAGVAGLAAIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCHHHHHHHCC AGSLGAIVRATDPRPEVADQVASLGGEYLAVDPAAAEVSATGYAKEMGEDYKVREAALYA CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCHHHHCCCCCHHHCCCCHHHHHHHHHH EQCKDVDIIITTALIPGRPAPRIITADMVASMKSGSVIVDMAAANGGNVEGTVKDQAIVT HHCCCCEEEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEEEEECCCCCCCEEECCCEEEE DNGVTIIGYTDLAGRLPATASQLYATNLVNLLKLLTPNKDGQLTLDFDDVVQRSVTVIRD CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHEEEEEC GEVTWPPPPVQVSAAPAAKAAAPVEHKPAKQPMSMGRRLGITFAAAAALFVLIALSPAAL CEEECCCCCCEEECCCCHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHH QVHLTVFALAIVIGYYVIGNVHHALHTPLMSVTNAISGIIVVGALLQIGHGDPVVTAIAT HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VAILLASINVFGGFSVTRRMLAMFSRS HHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]