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The map label for this gene is mmgC [H]

Identifier: 108797080

GI number: 108797080

Start: 113073

End: 114215

Strand: Reverse

Name: mmgC [H]

Synonym: Mmcs_0099

Alternate gene names: 108797080

Gene position: 114215-113073 (Counterclockwise)

Preceding gene: 108797081

Following gene: 108797079

Centisome position: 2.0

GC content: 69.55

Gene sequence:

>1143_bases
ATGCCGGTTGACCGTCTGCTGCCCTCCGACGAGGCGCGCGAGCTCATCGCGCTGACCCGTGACATCGCCGACAAGGTGCT
CGACCCCATCGTCGACGAGCACGAGAAGACCGAGACCTACCCCGAGGGCGTCTTCGCCCAGCTGGGCGCGGCGGGGCTGC
TGAGCCTGCCGCAGCCGGAGGAGTGGGGTGGCGGCGGTCAACCGTACGAGGTCTACCTGCAGGTGCTCGAGGAGATTGCG
GCGCGGTGGGCGGCGGTCGCGGTGGCGGTCAGCGTGCACAGCCTGTCGTCGCACCCGCTGCTGGCCTTCGGCACCGACGA
GCAGAAGCAACGCTGGCTGCCCGGCATGCTGTCGGGCTCCCAGATCGGCGCGTACAGCCTGTCCGAACCGCAGGCCGGTT
CCGATGCGGCGGCATTGCGTTGTGCGGCTGTGCCTTCCGACGGTAAGTACGTGATCACCGGTGAGAAGTCGTGGATCACC
CACGGCGGGAGGGCCGACTTCTACACGCTGTTCGCGCGAACCGGCGAGGGGTCTCGCGGGATCAGCTGCTTCCTGATCCC
CGGTGGCCAGCCCGGGCTGTCCTTCGGCAAGCCGGAGGAGAAGATGGGTCTGCACGCGGTGCCGACGACGACGGCGCACT
ACGACGAGGCCCGCGTCGACGCCGACCGGCGCATCGGCGCGGAGGGTCAGGGTCTGCAGATCGCGTTCTCCGCGCTGGAC
TCCGGACGGTTGGGTATCGCGGCGGTGGCCGTCGGTCTGGCGCAGGCCGCACTCGACGAGGCGACCCGCTACGCCAACGA
GCGAACCACGTTCGGCCGCAAGATCATCGACCATCAGGGGCTGGGTTTCCTGCTCGCCGACATGGCCGCCGCCGTGGTCA
GCGCCCGGGCCACCTACCTGGATGCCGCGCGGCGGCGCGACCTCGGCCTGCCGTACTCGACCCAGGCCAGCGTCGCCAAG
CTGATCGCGACGGATGCGGCGATGAAGGTGACCACCGACGCGGTGCAGGTGCTCGGCGGCGTCGGCTACACCCGCGACTT
CCGGGTCGAGCGCTACATGCGCGAAGCCAAGATCACGCAGATCTTCGAGGGCACGAACCAGATTCAGCGGCTGGTCATCT
CGCGCTCGCTCACGGCACGCTGA

Upstream 100 bases:

>100_bases
TGTTCTTCCGCGACAACACCCAGATGCTGTTCGGTGACGCCAAAGACCGGGTCGACGCCATCAACGCGGCGCTCACGGTC
CCCGAGAAGGTCTAGGTCAG

Downstream 100 bases:

>100_bases
GCCGTTCGCCGTAGCAGACCCGCTCGAAGCCGTCCTGGCGTCCGCGGCCGGCCGCGGATGGAACGTCGGGCTCTCGGTCA
CCGACAGTGGCCCGGCGGAC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MPVDRLLPSDEARELIALTRDIADKVLDPIVDEHEKTETYPEGVFAQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIA
ARWAAVAVAVSVHSLSSHPLLAFGTDEQKQRWLPGMLSGSQIGAYSLSEPQAGSDAAALRCAAVPSDGKYVITGEKSWIT
HGGRADFYTLFARTGEGSRGISCFLIPGGQPGLSFGKPEEKMGLHAVPTTTAHYDEARVDADRRIGAEGQGLQIAFSALD
SGRLGIAAVAVGLAQAALDEATRYANERTTFGRKIIDHQGLGFLLADMAAAVVSARATYLDAARRRDLGLPYSTQASVAK
LIATDAAMKVTTDAVQVLGGVGYTRDFRVERYMREAKITQIFEGTNQIQRLVISRSLTAR

Sequences:

>Translated_380_residues
MPVDRLLPSDEARELIALTRDIADKVLDPIVDEHEKTETYPEGVFAQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIA
ARWAAVAVAVSVHSLSSHPLLAFGTDEQKQRWLPGMLSGSQIGAYSLSEPQAGSDAAALRCAAVPSDGKYVITGEKSWIT
HGGRADFYTLFARTGEGSRGISCFLIPGGQPGLSFGKPEEKMGLHAVPTTTAHYDEARVDADRRIGAEGQGLQIAFSALD
SGRLGIAAVAVGLAQAALDEATRYANERTTFGRKIIDHQGLGFLLADMAAAVVSARATYLDAARRRDLGLPYSTQASVAK
LIATDAAMKVTTDAVQVLGGVGYTRDFRVERYMREAKITQIFEGTNQIQRLVISRSLTAR
>Mature_379_residues
PVDRLLPSDEARELIALTRDIADKVLDPIVDEHEKTETYPEGVFAQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAA
RWAAVAVAVSVHSLSSHPLLAFGTDEQKQRWLPGMLSGSQIGAYSLSEPQAGSDAAALRCAAVPSDGKYVITGEKSWITH
GGRADFYTLFARTGEGSRGISCFLIPGGQPGLSFGKPEEKMGLHAVPTTTAHYDEARVDADRRIGAEGQGLQIAFSALDS
GRLGIAAVAVGLAQAALDEATRYANERTTFGRKIIDHQGLGFLLADMAAAVVSARATYLDAARRRDLGLPYSTQASVAKL
IATDAAMKVTTDAVQVLGGVGYTRDFRVERYMREAKITQIFEGTNQIQRLVISRSLTAR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=366, Percent_Identity=41.5300546448087, Blast_Score=275, Evalue=5e-74,
Organism=Homo sapiens, GI4557231, Length=372, Percent_Identity=37.6344086021505, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI187960098, Length=372, Percent_Identity=37.6344086021505, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI7656849, Length=378, Percent_Identity=34.3915343915344, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI4501859, Length=379, Percent_Identity=35.3562005277045, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI226958412, Length=388, Percent_Identity=32.4742268041237, Blast_Score=214, Evalue=8e-56,
Organism=Homo sapiens, GI21361497, Length=345, Percent_Identity=34.4927536231884, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI76496475, Length=376, Percent_Identity=33.2446808510638, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI4557235, Length=376, Percent_Identity=33.2446808510638, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI226958414, Length=348, Percent_Identity=33.6206896551724, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI4501857, Length=371, Percent_Identity=28.8409703504043, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI4503943, Length=363, Percent_Identity=28.099173553719, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI7669494, Length=348, Percent_Identity=27.5862068965517, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI38505218, Length=283, Percent_Identity=27.5618374558304, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI211971008, Length=289, Percent_Identity=27.3356401384083, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI48976061, Length=289, Percent_Identity=27.3356401384083, Blast_Score=107, Evalue=2e-23,
Organism=Escherichia coli, GI87081958, Length=343, Percent_Identity=30.0291545189504, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI1786223, Length=372, Percent_Identity=27.6881720430108, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI87082384, Length=292, Percent_Identity=24.6575342465753, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87081702, Length=366, Percent_Identity=26.5027322404372, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=377, Percent_Identity=36.604774535809, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17570075, Length=383, Percent_Identity=36.0313315926893, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17534899, Length=376, Percent_Identity=36.7021276595745, Blast_Score=238, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17506239, Length=363, Percent_Identity=34.9862258953168, Blast_Score=234, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI17569725, Length=374, Percent_Identity=34.2245989304813, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17538396, Length=384, Percent_Identity=33.0729166666667, Blast_Score=218, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17533517, Length=379, Percent_Identity=31.3984168865435, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71985184, Length=391, Percent_Identity=31.4578005115089, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI71990804, Length=276, Percent_Identity=36.231884057971, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17551932, Length=370, Percent_Identity=30, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17534353, Length=373, Percent_Identity=28.1501340482574, Blast_Score=161, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI71985192, Length=338, Percent_Identity=29.585798816568, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI32563615, Length=244, Percent_Identity=34.4262295081967, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17505929, Length=370, Percent_Identity=28.9189189189189, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71982178, Length=280, Percent_Identity=26.7857142857143, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17531909, Length=230, Percent_Identity=26.9565217391304, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17531913, Length=177, Percent_Identity=27.1186440677966, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562446, Length=256, Percent_Identity=26.953125, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI86563383, Length=327, Percent_Identity=25.6880733944954, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=327, Percent_Identity=25.6880733944954, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17540912, Length=363, Percent_Identity=23.1404958677686, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356377, Length=362, Percent_Identity=38.6740331491713, Blast_Score=253, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24646207, Length=361, Percent_Identity=39.3351800554017, Blast_Score=244, Evalue=9e-65,
Organism=Drosophila melanogaster, GI24660351, Length=376, Percent_Identity=36.7021276595745, Blast_Score=235, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=33.1578947368421, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI281363737, Length=383, Percent_Identity=31.0704960835509, Blast_Score=205, Evalue=4e-53,
Organism=Drosophila melanogaster, GI21355753, Length=386, Percent_Identity=32.6424870466321, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI19920834, Length=356, Percent_Identity=30.6179775280899, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI24652780, Length=353, Percent_Identity=23.5127478753541, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40718; Mature: 40587

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVDRLLPSDEARELIALTRDIADKVLDPIVDEHEKTETYPEGVFAQLGAAGLLSLPQPE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHCCHHCCCCCCCC
EWGGGGQPYEVYLQVLEEIAARWAAVAVAVSVHSLSSHPLLAFGTDEQKQRWLPGMLSGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCC
QIGAYSLSEPQAGSDAAALRCAAVPSDGKYVITGEKSWITHGGRADFYTLFARTGEGSRG
CCCCEECCCCCCCCCHHHEEEEECCCCCCEEEECCHHEECCCCCCCEEEEEEECCCCCCC
ISCFLIPGGQPGLSFGKPEEKMGLHAVPTTTAHYDEARVDADRRIGAEGQGLQIAFSALD
EEEEEEECCCCCCCCCCCHHHCCCEECCCCCCCCCHHHHCHHHHCCCCCCCEEEEEEECC
SGRLGIAAVAVGLAQAALDEATRYANERTTFGRKIIDHQGLGFLLADMAAAVVSARATYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DAARRRDLGLPYSTQASVAKLIATDAAMKVTTDAVQVLGGVGYTRDFRVERYMREAKITQ
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IFEGTNQIQRLVISRSLTAR
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVDRLLPSDEARELIALTRDIADKVLDPIVDEHEKTETYPEGVFAQLGAAGLLSLPQPE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHCCHHCCCCCCCC
EWGGGGQPYEVYLQVLEEIAARWAAVAVAVSVHSLSSHPLLAFGTDEQKQRWLPGMLSGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCC
QIGAYSLSEPQAGSDAAALRCAAVPSDGKYVITGEKSWITHGGRADFYTLFARTGEGSRG
CCCCEECCCCCCCCCHHHEEEEECCCCCCEEEECCHHEECCCCCCCEEEEEEECCCCCCC
ISCFLIPGGQPGLSFGKPEEKMGLHAVPTTTAHYDEARVDADRRIGAEGQGLQIAFSALD
EEEEEEECCCCCCCCCCCHHHCCCEECCCCCCCCCHHHHCHHHHCCCCCCCEEEEEEECC
SGRLGIAAVAVGLAQAALDEATRYANERTTFGRKIIDHQGLGFLLADMAAAVVSARATYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DAARRRDLGLPYSTQASVAKLIATDAAMKVTTDAVQVLGGVGYTRDFRVERYMREAKITQ
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IFEGTNQIQRLVISRSLTAR
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]