| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797013
Identifier: 108797013
GI number: 108797013
Start: 40919
End: 42697
Strand: Direct
Name: 108797013
Synonym: Mmcs_0032
Alternate gene names: NA
Gene position: 40919-42697 (Clockwise)
Preceding gene: 108797012
Following gene: 108797015
Centisome position: 0.72
GC content: 65.09
Gene sequence:
>1779_bases ATGATCACCGACTTCGAAAAGTCATACCGCCTGTCAGACAGCCTCTTCCGTGAGGCCAAGGTCATCATCGAACGATCACA CGCGGCGGAGATGATCAACGATTTCCATGACCAGCACCGCGGCGCCGGTGGACAAGACTGCGCCGGAATCGCCTACACCA TCTCCGCCGTCCTCGTCGCCGCCCTGGGACTGTTGATGCTTGGGCGAACCCCGACCTACAAGGCCATCCAGCAGGCCATC GGCGACCTCACCCCGCGACAACTCGCCGAAGTCGGTATGGCAGGACAAGACACCTCCCGCATCTTCGCCGACCGCGCCGA GCAACGCCGCGAGCGGACACGCTTCGTTGCCTGGCTCAACCGCCGCCTCGCACCACTCGATCCCAGCCCCGACCAACCAG CACGACGAATCACCAACGCCGAACACCGCCGCATCATCGCCCACCGCAGCACCGAACAACGCGCAGCGAGCGGAGAAGCC ACCGAACGCCTGCGAACGGTCATGAATCGCATCGTCTTCGGGTCCATCGTCGATCCGCAGCCACCCGAGGCCGTCGGCGA CATCGTGGCCGACGAGACGATCTTCGACCTCGCCGGCCCCTCAGCTGGGCTGGGGATAAAACCCGACAAACAGCGCGGAG CCGCATACTTCGGCAGCTACTACTCCCGAGACAAGCACTCCACCACCGTGTATCAAGATGCCAGCGGCGGCGGAAAGCGT GGCTTCGGCATCGGACTGACCGCCGTGATACGCGTTGGACCACCGGACCAGCTGCACGCAGTCGCGCCCGTCGTCATCGG GATGGACGTCCATCCACCCACCTCCGGCAGCGTCGATGGACTCGACGTCGCTATCACTCACGCCAAACGCAATGGACTCG ACACGCGGCGTGCGGGACGGGCACGCCTGCCGTGTCTCACTACGGATATGGGCTACAACCCCAAGGACGGCTTCGCACGC CTGATGCTCGACCACCAGTACGCCGCCGTCGTGCGGTACCCACAACACTGGACACTCACCGATACCGCGGCCAATCCACC CGGTGCCACCGCAGACGTCCCGCCCGGGCCCATCCAGTTCGCCGGCTCGTTCTACTGTCCGGCCGCGGCCGACCTACTCG CCCAACACCACATGCCCAAAACCCGCGACCTGCTGGCCGACAACGGGTGGGAGGCGCACGACCGCCGCCTGGCAAGTGTC CTGCCCTTCCTGATGGGCCTGAACTCCCGGCCGCGACTGAGCCGACCACGTGGACGCCCACCCCTGGGAGTCGAACCACG ACTCGACGTGAAGGCGGAGCTGGTCTGCCCTGCCGTGCAGCTGCGCGTCCAATGCCCACTCAAACCGGCGTCGATGACAC GCGCCGCCTTCGGCGCCCCGACAGCAGCGCCGACCTGGCAAGCAAGCGATCGCCAATGCTGCGCCCAATCGATCGTCACC GTCACCTTGACACCCCGTCAGCTCAAAAAGGCCCAATGGGGACCCGTCGGCGCCAGTTGGGAACACATCCTGTACTTCGA GGCAGCGCGCGCTCGAACCGAGCAGACATTCAGCATCCTCAAGTCGGCCCACGTCACCAAGCTCGTCGACCTCAAGTGGG GTCCCCGACGCGAACCCATGGTCAAGCTCCTGATGGCGCTCGCCGTAGCCAGCACTAATCACCGCATCCAAAAGACCTAC AGGTCACGCCAGGCTCGCGAAGAATCCATCGACGTCCGCCGACGCCAACTCCGCGACCACCTCGGACACGAACCCGCCAA GACACCGCCCCTGACCTAA
Upstream 100 bases:
>100_bases CGCCGACGTGGTCGACGTTCAAGTACTCGCCGACCAACGCACCCAACTCCCCACCTACGGCATCCATCGCGCGATCGCCC TCATGGCGGAAGGCTGAACC
Downstream 100 bases:
>100_bases CGAGACCCAACCCGCAGCGGGCCGCGCGAACACCGCGTCGGCCCGCTGCGCCATGTCCGATGCACCAGATAAATCCCGGT CAAAAATTACCTGTCAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MITDFEKSYRLSDSLFREAKVIIERSHAAEMINDFHDQHRGAGGQDCAGIAYTISAVLVAALGLLMLGRTPTYKAIQQAI GDLTPRQLAEVGMAGQDTSRIFADRAEQRRERTRFVAWLNRRLAPLDPSPDQPARRITNAEHRRIIAHRSTEQRAASGEA TERLRTVMNRIVFGSIVDPQPPEAVGDIVADETIFDLAGPSAGLGIKPDKQRGAAYFGSYYSRDKHSTTVYQDASGGGKR GFGIGLTAVIRVGPPDQLHAVAPVVIGMDVHPPTSGSVDGLDVAITHAKRNGLDTRRAGRARLPCLTTDMGYNPKDGFAR LMLDHQYAAVVRYPQHWTLTDTAANPPGATADVPPGPIQFAGSFYCPAAADLLAQHHMPKTRDLLADNGWEAHDRRLASV LPFLMGLNSRPRLSRPRGRPPLGVEPRLDVKAELVCPAVQLRVQCPLKPASMTRAAFGAPTAAPTWQASDRQCCAQSIVT VTLTPRQLKKAQWGPVGASWEHILYFEAARARTEQTFSILKSAHVTKLVDLKWGPRREPMVKLLMALAVASTNHRIQKTY RSRQAREESIDVRRRQLRDHLGHEPAKTPPLT
Sequences:
>Translated_592_residues MITDFEKSYRLSDSLFREAKVIIERSHAAEMINDFHDQHRGAGGQDCAGIAYTISAVLVAALGLLMLGRTPTYKAIQQAI GDLTPRQLAEVGMAGQDTSRIFADRAEQRRERTRFVAWLNRRLAPLDPSPDQPARRITNAEHRRIIAHRSTEQRAASGEA TERLRTVMNRIVFGSIVDPQPPEAVGDIVADETIFDLAGPSAGLGIKPDKQRGAAYFGSYYSRDKHSTTVYQDASGGGKR GFGIGLTAVIRVGPPDQLHAVAPVVIGMDVHPPTSGSVDGLDVAITHAKRNGLDTRRAGRARLPCLTTDMGYNPKDGFAR LMLDHQYAAVVRYPQHWTLTDTAANPPGATADVPPGPIQFAGSFYCPAAADLLAQHHMPKTRDLLADNGWEAHDRRLASV LPFLMGLNSRPRLSRPRGRPPLGVEPRLDVKAELVCPAVQLRVQCPLKPASMTRAAFGAPTAAPTWQASDRQCCAQSIVT VTLTPRQLKKAQWGPVGASWEHILYFEAARARTEQTFSILKSAHVTKLVDLKWGPRREPMVKLLMALAVASTNHRIQKTY RSRQAREESIDVRRRQLRDHLGHEPAKTPPLT >Mature_592_residues MITDFEKSYRLSDSLFREAKVIIERSHAAEMINDFHDQHRGAGGQDCAGIAYTISAVLVAALGLLMLGRTPTYKAIQQAI GDLTPRQLAEVGMAGQDTSRIFADRAEQRRERTRFVAWLNRRLAPLDPSPDQPARRITNAEHRRIIAHRSTEQRAASGEA TERLRTVMNRIVFGSIVDPQPPEAVGDIVADETIFDLAGPSAGLGIKPDKQRGAAYFGSYYSRDKHSTTVYQDASGGGKR GFGIGLTAVIRVGPPDQLHAVAPVVIGMDVHPPTSGSVDGLDVAITHAKRNGLDTRRAGRARLPCLTTDMGYNPKDGFAR LMLDHQYAAVVRYPQHWTLTDTAANPPGATADVPPGPIQFAGSFYCPAAADLLAQHHMPKTRDLLADNGWEAHDRRLASV LPFLMGLNSRPRLSRPRGRPPLGVEPRLDVKAELVCPAVQLRVQCPLKPASMTRAAFGAPTAAPTWQASDRQCCAQSIVT VTLTPRQLKKAQWGPVGASWEHILYFEAARARTEQTFSILKSAHVTKLVDLKWGPRREPMVKLLMALAVASTNHRIQKTY RSRQAREESIDVRRRQLRDHLGHEPAKTPPLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65103; Mature: 65103
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITDFEKSYRLSDSLFREAKVIIERSHAAEMINDFHDQHRGAGGQDCAGIAYTISAVLVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ALGLLMLGRTPTYKAIQQAIGDLTPRQLAEVGMAGQDTSRIFADRAEQRRERTRFVAWLN HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRLAPLDPSPDQPARRITNAEHRRIIAHRSTEQRAASGEATERLRTVMNRIVFGSIVDPQ CCCCCCCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC PPEAVGDIVADETIFDLAGPSAGLGIKPDKQRGAAYFGSYYSRDKHSTTVYQDASGGGKR CCHHHHHHHHCCHHHHHCCCCCCCCCCCCHHCCHHHHHHHHCCCCCCCEEEECCCCCCCC GFGIGLTAVIRVGPPDQLHAVAPVVIGMDVHPPTSGSVDGLDVAITHAKRNGLDTRRAGR CCCCCEEEEEEECCCHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEHHHCCCCHHHCCC ARLPCLTTDMGYNPKDGFARLMLDHQYAAVVRYPQHWTLTDTAANPPGATADVPPGPIQF CCCCEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEE AGSFYCPAAADLLAQHHMPKTRDLLADNGWEAHDRRLASVLPFLMGLNSRPRLSRPRGRP CCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PLGVEPRLDVKAELVCPAVQLRVQCPLKPASMTRAAFGAPTAAPTWQASDRQCCAQSIVT CCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCEE VTLTPRQLKKAQWGPVGASWEHILYFEAARARTEQTFSILKSAHVTKLVDLKWGPRREPM EEECHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHH VKLLMALAVASTNHRIQKTYRSRQAREESIDVRRRQLRDHLGHEPAKTPPLT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MITDFEKSYRLSDSLFREAKVIIERSHAAEMINDFHDQHRGAGGQDCAGIAYTISAVLVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ALGLLMLGRTPTYKAIQQAIGDLTPRQLAEVGMAGQDTSRIFADRAEQRRERTRFVAWLN HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRLAPLDPSPDQPARRITNAEHRRIIAHRSTEQRAASGEATERLRTVMNRIVFGSIVDPQ CCCCCCCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC PPEAVGDIVADETIFDLAGPSAGLGIKPDKQRGAAYFGSYYSRDKHSTTVYQDASGGGKR CCHHHHHHHHCCHHHHHCCCCCCCCCCCCHHCCHHHHHHHHCCCCCCCEEEECCCCCCCC GFGIGLTAVIRVGPPDQLHAVAPVVIGMDVHPPTSGSVDGLDVAITHAKRNGLDTRRAGR CCCCCEEEEEEECCCHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEHHHCCCCHHHCCC ARLPCLTTDMGYNPKDGFARLMLDHQYAAVVRYPQHWTLTDTAANPPGATADVPPGPIQF CCCCEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEE AGSFYCPAAADLLAQHHMPKTRDLLADNGWEAHDRRLASVLPFLMGLNSRPRLSRPRGRP CCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PLGVEPRLDVKAELVCPAVQLRVQCPLKPASMTRAAFGAPTAAPTWQASDRQCCAQSIVT CCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCEE VTLTPRQLKKAQWGPVGASWEHILYFEAARARTEQTFSILKSAHVTKLVDLKWGPRREPM EEECHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHH VKLLMALAVASTNHRIQKTYRSRQAREESIDVRRRQLRDHLGHEPAKTPPLT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA