| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797012
Identifier: 108797012
GI number: 108797012
Start: 39866
End: 40915
Strand: Direct
Name: 108797012
Synonym: Mmcs_0031
Alternate gene names: NA
Gene position: 39866-40915 (Clockwise)
Preceding gene: 108797011
Following gene: 108797013
Centisome position: 0.7
GC content: 66.76
Gene sequence:
>1050_bases ATGGGCCGTCACGGCGCCATGGCGTCGGCCGCCGACGACCCGGAGCCAGCGAAGCCAGTGGCGAGGGCCAACCACGACCG GGCCGACAGCCAACGCCACGTACTCGCGCCGTTTCACCACGACGTCAACGAGGACCGCTATCGAGCGCTGGCGGGCCTCA CCATCAGAGGCGTCGATCCGCGCTACCTGGTGCCCGCGCTGGAATCAGCCAAACGCCTGTGGTGCCGTCTGGGTGACTTC GCGCCGTCGACCGACCGAATCTCGGCCGCGCATCTCGCCCGCTATCTGGCGTTCGAGGCCGAACGCGTCGGCACCTTCGA CTACCGAACAGCGTTGCGCCGAGCCAACGTCGACCGGCACCTCATGGACATCGCCACCCGGAAAACCAACCGGTCCATGC GCACCATCAGGTGGATTCTCTATGACGCCGGCCGATTGGTGCACCCCCGGGAATACCCGGAGGCACGCACTCTGCCCGCG CCACGCACCAAGAGAATCGACGCGGCCGCACCGCAGGACATTCGTGACTGGTACACCCTGGCACCGACCCTGCCGCAGTG GCTCCGACGACGCCTCGCGCTCTTACTGGACCTCTGCTACGGCGCCGGCGCGCGGCCGCCCGACTTCAAAGTCTTGCGCG GCACCTCCATCACGAGCGAGACCATCGACGGCCTACACATCGCCATCGTGCGCTTGCAGAACACAGCTGGAGGGACACGG CTCGTTCCAATAACCGATCCCGACATCTCCCGCCGTCTGTTGGCACTTGCGCAAAGCAAGGGATCGGACTACCTGTTACC GGCCGCGAAGGGAGAAGTGGAGCGCAACGCGACCAACCGCATCGGCGAGCAACTCCGCGCCCGCGGTCACGGGAACATCA ACGCCGCCGCGCTGCGCAACCGCTGGATCCTCGACCTCGCCGACCGCGTCCCAGCGGCACTTCTGCTGCAACTCGCCGAC GTGGTCGACGTTCAAGTACTCGCCGACCAACGCACCCAACTCCCCACCTACGGCATCCATCGCGCGATCGCCCTCATGGC GGAAGGCTGA
Upstream 100 bases:
>100_bases GGAACCTTCACCAGATCCACTCAGGAGGAATTTTGTTCATTTCATCGTGTTCGCATGCGCATGTCAACGGCTTCGCCGGT GTGTCGCGGAGCGTGTGCTG
Downstream 100 bases:
>100_bases ACCATGATCACCGACTTCGAAAAGTCATACCGCCTGTCAGACAGCCTCTTCCGTGAGGCCAAGGTCATCATCGAACGATC ACACGCGGCGGAGATGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MGRHGAMASAADDPEPAKPVARANHDRADSQRHVLAPFHHDVNEDRYRALAGLTIRGVDPRYLVPALESAKRLWCRLGDF APSTDRISAAHLARYLAFEAERVGTFDYRTALRRANVDRHLMDIATRKTNRSMRTIRWILYDAGRLVHPREYPEARTLPA PRTKRIDAAAPQDIRDWYTLAPTLPQWLRRRLALLLDLCYGAGARPPDFKVLRGTSITSETIDGLHIAIVRLQNTAGGTR LVPITDPDISRRLLALAQSKGSDYLLPAAKGEVERNATNRIGEQLRARGHGNINAAALRNRWILDLADRVPAALLLQLAD VVDVQVLADQRTQLPTYGIHRAIALMAEG
Sequences:
>Translated_349_residues MGRHGAMASAADDPEPAKPVARANHDRADSQRHVLAPFHHDVNEDRYRALAGLTIRGVDPRYLVPALESAKRLWCRLGDF APSTDRISAAHLARYLAFEAERVGTFDYRTALRRANVDRHLMDIATRKTNRSMRTIRWILYDAGRLVHPREYPEARTLPA PRTKRIDAAAPQDIRDWYTLAPTLPQWLRRRLALLLDLCYGAGARPPDFKVLRGTSITSETIDGLHIAIVRLQNTAGGTR LVPITDPDISRRLLALAQSKGSDYLLPAAKGEVERNATNRIGEQLRARGHGNINAAALRNRWILDLADRVPAALLLQLAD VVDVQVLADQRTQLPTYGIHRAIALMAEG >Mature_348_residues GRHGAMASAADDPEPAKPVARANHDRADSQRHVLAPFHHDVNEDRYRALAGLTIRGVDPRYLVPALESAKRLWCRLGDFA PSTDRISAAHLARYLAFEAERVGTFDYRTALRRANVDRHLMDIATRKTNRSMRTIRWILYDAGRLVHPREYPEARTLPAP RTKRIDAAAPQDIRDWYTLAPTLPQWLRRRLALLLDLCYGAGARPPDFKVLRGTSITSETIDGLHIAIVRLQNTAGGTRL VPITDPDISRRLLALAQSKGSDYLLPAAKGEVERNATNRIGEQLRARGHGNINAAALRNRWILDLADRVPAALLLQLADV VDVQVLADQRTQLPTYGIHRAIALMAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38953; Mature: 38822
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHGAMASAADDPEPAKPVARANHDRADSQRHVLAPFHHDVNEDRYRALAGLTIRGVDP CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEECCHHCCCCHHHHHHHHCCEEECCCC RYLVPALESAKRLWCRLGDFAPSTDRISAAHLARYLAFEAERVGTFDYRTALRRANVDRH HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH LMDIATRKTNRSMRTIRWILYDAGRLVHPREYPEARTLPAPRTKRIDAAAPQDIRDWYTL HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH APTLPQWLRRRLALLLDLCYGAGARPPDFKVLRGTSITSETIDGLHIAIVRLQNTAGGTR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCEEEEEEEEECCCCCCE LVPITDPDISRRLLALAQSKGSDYLLPAAKGEVERNATNRIGEQLRARGHGNINAAALRN EEEECCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHC RWILDLADRVPAALLLQLADVVDVQVLADQRTQLPTYGIHRAIALMAEG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECC >Mature Secondary Structure GRHGAMASAADDPEPAKPVARANHDRADSQRHVLAPFHHDVNEDRYRALAGLTIRGVDP CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEECCHHCCCCHHHHHHHHCCEEECCCC RYLVPALESAKRLWCRLGDFAPSTDRISAAHLARYLAFEAERVGTFDYRTALRRANVDRH HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH LMDIATRKTNRSMRTIRWILYDAGRLVHPREYPEARTLPAPRTKRIDAAAPQDIRDWYTL HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH APTLPQWLRRRLALLLDLCYGAGARPPDFKVLRGTSITSETIDGLHIAIVRLQNTAGGTR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCEEEEEEEEECCCCCCE LVPITDPDISRRLLALAQSKGSDYLLPAAKGEVERNATNRIGEQLRARGHGNINAAALRN EEEECCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHC RWILDLADRVPAALLLQLADVVDVQVLADQRTQLPTYGIHRAIALMAEG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA