| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797011
Identifier: 108797011
GI number: 108797011
Start: 38340
End: 38999
Strand: Direct
Name: 108797011
Synonym: Mmcs_0030
Alternate gene names: NA
Gene position: 38340-38999 (Clockwise)
Preceding gene: 108797010
Following gene: 108797012
Centisome position: 0.67
GC content: 62.42
Gene sequence:
>660_bases ATGGCAGAGTTCGAATACATCCAGTGGCGTCATCGGTGGCCCGAAGTTGTGGTGCAGCGCCGTACCGACGAGGCCGTCGA ATTGTTGACGCGTTACTACGCCGTCACCGCTGCCGGACGACCGGCCTATTCAGGGTCGCAATTCGAGGCAATGGCCGCGC TGAACAGCGATCCCTATTCGATTGGACCCGCGGACTTCACCGCCGCCTCGATGCTCAGCGTGAACATCCATGCCCAAGCG GCGATCCGCCTCCTGAGCCGCGACGCCAACGAGATCACCGCTCTGCTGCACCGCATCCCGGTGGACGTCGACATCATCAC CATCGACCCCAACGACCTTGTGCCCGGTGGGCCTGCCAGCCTGCTGTGGCAATTGCTCCGCCGAGGCAACGACGGAATGG GCAGAACCCGGACTAGCAAGCTCATCGCAGCCAAACGTCCACGGCTTATACCCATCTGGGACAGCTTCGTCGAGCAGGCC ACCGGACTGGACACCTCTGACTACTGGCGACAGTTCCAAGCGGTCCTCGCCGCCGACGATCGCGCGGTATGGACCTGGTT GACTCAGATCCGCAGCGCTGTCCCGAATGTGCCTGCTGCGGTGTCGAATCTGCGGATCCTTGACGTGCTGCTGTGGATGA CGGTCGATCAGCAGCGTTGA
Upstream 100 bases:
>100_bases ACAAGATCACCTGGACCCAGCGCCGATGACGTAAAGACCCGACAATGTCGGCCCGCCGTGGTTACCTACCCACCGGAGCG TGTCTGTAGGGAGAACCAGA
Downstream 100 bases:
>100_bases TGATTGTGCGACGCTAACGGGGACTGAGGGGCTACGCGTCTGGGCCAGGGCGGTTTTCCACGGAAAACCGTTGGCACGCG ACCCTACTGGCCGCAGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MAEFEYIQWRHRWPEVVVQRRTDEAVELLTRYYAVTAAGRPAYSGSQFEAMAALNSDPYSIGPADFTAASMLSVNIHAQA AIRLLSRDANEITALLHRIPVDVDIITIDPNDLVPGGPASLLWQLLRRGNDGMGRTRTSKLIAAKRPRLIPIWDSFVEQA TGLDTSDYWRQFQAVLAADDRAVWTWLTQIRSAVPNVPAAVSNLRILDVLLWMTVDQQR
Sequences:
>Translated_219_residues MAEFEYIQWRHRWPEVVVQRRTDEAVELLTRYYAVTAAGRPAYSGSQFEAMAALNSDPYSIGPADFTAASMLSVNIHAQA AIRLLSRDANEITALLHRIPVDVDIITIDPNDLVPGGPASLLWQLLRRGNDGMGRTRTSKLIAAKRPRLIPIWDSFVEQA TGLDTSDYWRQFQAVLAADDRAVWTWLTQIRSAVPNVPAAVSNLRILDVLLWMTVDQQR >Mature_218_residues AEFEYIQWRHRWPEVVVQRRTDEAVELLTRYYAVTAAGRPAYSGSQFEAMAALNSDPYSIGPADFTAASMLSVNIHAQAA IRLLSRDANEITALLHRIPVDVDIITIDPNDLVPGGPASLLWQLLRRGNDGMGRTRTSKLIAAKRPRLIPIWDSFVEQAT GLDTSDYWRQFQAVLAADDRAVWTWLTQIRSAVPNVPAAVSNLRILDVLLWMTVDQQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24627; Mature: 24496
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFEYIQWRHRWPEVVVQRRTDEAVELLTRYYAVTAAGRPAYSGSQFEAMAALNSDPYS CCCCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCC IGPADFTAASMLSVNIHAQAAIRLLSRDANEITALLHRIPVDVDIITIDPNDLVPGGPAS CCCCHHHHHHHHEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH LLWQLLRRGNDGMGRTRTSKLIAAKRPRLIPIWDSFVEQATGLDTSDYWRQFQAVLAADD HHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCC RAVWTWLTQIRSAVPNVPAAVSNLRILDVLLWMTVDQQR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AEFEYIQWRHRWPEVVVQRRTDEAVELLTRYYAVTAAGRPAYSGSQFEAMAALNSDPYS CCCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCC IGPADFTAASMLSVNIHAQAAIRLLSRDANEITALLHRIPVDVDIITIDPNDLVPGGPAS CCCCHHHHHHHHEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH LLWQLLRRGNDGMGRTRTSKLIAAKRPRLIPIWDSFVEQATGLDTSDYWRQFQAVLAADD HHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCC RAVWTWLTQIRSAVPNVPAAVSNLRILDVLLWMTVDQQR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA