Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

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The map label for this gene is 108796994

Identifier: 108796994

GI number: 108796994

Start: 15301

End: 16137

Strand: Direct

Name: 108796994

Synonym: Mmcs_0013

Alternate gene names: NA

Gene position: 15301-16137 (Clockwise)

Preceding gene: 108796991

Following gene: 108796995

Centisome position: 0.27

GC content: 73.36

Gene sequence:

>837_bases
ATGGTGCAGATGCCCCCTGAGCCTAACGCAGGACCGGACCGGGAAACGCCGCCCACGACGTCGGCGGCCCCCGCGGCCCC
GGCGCGCGCGGGCGCCGGCCGCCGCTCCGGGTGGCGGTTCGGGGTGCCGCTGGTGTGTCTGGCCGCCGGCCTGTTGCTGG
CCGCCACCCACGGGGTGTCCGGCGGTGACGAGATCCGCCGCAGCGACGCACCCCGGCTGGTGGACCTCGTGCGGGAGGCG
CAGCAGTCCGTCGACCGCCTCGGCGCCGAACGCGACACCCTCTCGGCGCAGGTCGACGGCCACCACGGTGGAAGCCCGGG
CACCGATGCGGCGTTGAGCGCCATCACCAACCGGTCGGCGGCCCTGGCCGCCGAAGCGGGGCTGAACCCGGTGAAGGGGC
CGGGCCTGGTCGTCACCCTCAACGACGCCCAGCGCGACGCCGAGGGCCGGTTCCCCAGGGACGCCTCCCCCGACGATCTG
GTGGTCCATCAGCAGGACATCCAGGCGGTGCTCAACGCGCTGTGGAGCGCGGGCGCGGAGGGCGTCCAGATGCAGGACCA
GCGGATCATCGCCACGTCCGCACCCCGCTGCGTCGGCAACACCCTGCTGCTCAACGGGCGCACCTACAGCCCGCCCTACG
TCATCACCGCGATCGGTGACGCCGGCGCAATGCAGGCCGCGCTGTCGGCGTCCCCGCTGGTGACGCTCTACAAGCAGTAC
GTGGTGCGGTTCGGCCTCGGCTACACCGAGGAGCCGCGCGCCGAGGTGGAACTCGTCGGCCACACCGAACCGGTCCGGAT
GAAGCACGCACAGCCGATCGGACCCGTCGGGTACTGA

Upstream 100 bases:

>100_bases
AAGTCGTTCTTCTTGCGGACCTTCGACTTGGGCATGGTCACCTTCGTGGCTGTCGGCGTCGCAGTTCCACCGGTGCGCTG
ACCGGCTCCGAGATGCGACG

Downstream 100 bases:

>100_bases
CACACCGGATGTAACCTGGCCGAATGCAGTTCTTGGTCGTCGACAATTACGACAGCTTCGTGTTCAACCTCGTCCAGTAC
CTCGGACAGCTCGGGGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MVQMPPEPNAGPDRETPPTTSAAPAAPARAGAGRRSGWRFGVPLVCLAAGLLLAATHGVSGGDEIRRSDAPRLVDLVREA
QQSVDRLGAERDTLSAQVDGHHGGSPGTDAALSAITNRSAALAAEAGLNPVKGPGLVVTLNDAQRDAEGRFPRDASPDDL
VVHQQDIQAVLNALWSAGAEGVQMQDQRIIATSAPRCVGNTLLLNGRTYSPPYVITAIGDAGAMQAALSASPLVTLYKQY
VVRFGLGYTEEPRAEVELVGHTEPVRMKHAQPIGPVGY

Sequences:

>Translated_278_residues
MVQMPPEPNAGPDRETPPTTSAAPAAPARAGAGRRSGWRFGVPLVCLAAGLLLAATHGVSGGDEIRRSDAPRLVDLVREA
QQSVDRLGAERDTLSAQVDGHHGGSPGTDAALSAITNRSAALAAEAGLNPVKGPGLVVTLNDAQRDAEGRFPRDASPDDL
VVHQQDIQAVLNALWSAGAEGVQMQDQRIIATSAPRCVGNTLLLNGRTYSPPYVITAIGDAGAMQAALSASPLVTLYKQY
VVRFGLGYTEEPRAEVELVGHTEPVRMKHAQPIGPVGY
>Mature_278_residues
MVQMPPEPNAGPDRETPPTTSAAPAAPARAGAGRRSGWRFGVPLVCLAAGLLLAATHGVSGGDEIRRSDAPRLVDLVREA
QQSVDRLGAERDTLSAQVDGHHGGSPGTDAALSAITNRSAALAAEAGLNPVKGPGLVVTLNDAQRDAEGRFPRDASPDDL
VVHQQDIQAVLNALWSAGAEGVQMQDQRIIATSAPRCVGNTLLLNGRTYSPPYVITAIGDAGAMQAALSASPLVTLYKQY
VVRFGLGYTEEPRAEVELVGHTEPVRMKHAQPIGPVGY

Specific function: Unknown

COG id: COG3879

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0749 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010273 [H]

Pfam domain/function: PF05949 DUF881 [H]

EC number: NA

Molecular weight: Translated: 29012; Mature: 29012

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQMPPEPNAGPDRETPPTTSAAPAAPARAGAGRRSGWRFGVPLVCLAAGLLLAATHGVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCC
GGDEIRRSDAPRLVDLVREAQQSVDRLGAERDTLSAQVDGHHGGSPGTDAALSAITNRSA
CCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCCCCCCCHHHHHHHHHCCHH
ALAAEAGLNPVKGPGLVVTLNDAQRDAEGRFPRDASPDDLVVHQQDIQAVLNALWSAGAE
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCC
GVQMQDQRIIATSAPRCVGNTLLLNGRTYSPPYVITAIGDAGAMQAALSASPLVTLYKQY
CCEECCCEEEECCCCCHHCCEEEECCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHH
VVRFGLGYTEEPRAEVELVGHTEPVRMKHAQPIGPVGY
HHHHCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MVQMPPEPNAGPDRETPPTTSAAPAAPARAGAGRRSGWRFGVPLVCLAAGLLLAATHGVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCC
GGDEIRRSDAPRLVDLVREAQQSVDRLGAERDTLSAQVDGHHGGSPGTDAALSAITNRSA
CCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCCCCCCCHHHHHHHHHCCHH
ALAAEAGLNPVKGPGLVVTLNDAQRDAEGRFPRDASPDDLVVHQQDIQAVLNALWSAGAE
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCC
GVQMQDQRIIATSAPRCVGNTLLLNGRTYSPPYVITAIGDAGAMQAALSASPLVTLYKQY
CCEECCCEEEECCCCCHHCCEEEECCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHH
VVRFGLGYTEEPRAEVELVGHTEPVRMKHAQPIGPVGY
HHHHCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]