| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yxaH [H]
Identifier: 108764048
GI number: 108764048
Start: 6368785
End: 6370113
Strand: Reverse
Name: yxaH [H]
Synonym: MXAN_5096
Alternate gene names: 108764048
Gene position: 6370113-6368785 (Counterclockwise)
Preceding gene: 108760403
Following gene: 108762358
Centisome position: 69.7
GC content: 67.27
Gene sequence:
>1329_bases ATGTCCCAATCTGGTTCTCCCGTGGCGGACGACCTGCCCGTGGCGCGTCCAGTGGATGCCTCCGAGCGAGTCGTCTTGCT GGACGCCCTCCGTGGCTTCGCACTCTGGGGCGTCTTCGTGTCCAACAGCCTCATGTGGCTGAGTGGACGGGCCTTCATGC CCCGTGAGGCTGCGTCCGCGCTGGATGCCCCCCTGCTGGAGCAGGTGATCGGCTCCATCTATCAGCTCTTCGTGACGCAG AAGTTCATCTCCATCTTCTCGTTCCTCTTCGGCCTGGGCTTCGCACTCCAGTTCTCGCGGGCCGAGTCACGTGGCGTCTC CGCCGCGCCGCTCTACCGCCGGCGGCTGCTGATGCTCTTCGGCATCGGCCTGGCGCACGCCCTTCTGTTGTGGACGGGCG ATATCCTCCACACCTACGCGATGGTGGGCTTCCTGCTGATGGCCTTCCGGGCTCGCTCCAACCGCACGGTGCTGTTCTGG GCGCTGGGGCTCGTCACCGTGATGCCGTTCCTGGTGCCCGCCGCCATTCGCTACACGCCCATCCTGCTGCACGGCGCGGA GGCCGCGGCCGAGGCGGCGAAGGCCAGTCATGCCAGGGATATGGCCTTGAGAGCCGACACCCTGGTGGCGTTGTCGAGCG AGTCGTTCTGGACGGCGCAGGTGGGCAACGCACGCTTCTTCCTGGAGAACCTCGGCGGCGGCTTCCGGCGCGTGCTCTGG ATGAGCCTCATCCTGGGGCGCTTCCTGCTGGGGTTGCTGGCGGGGCGTCTGCTCCTGTTGCAGGACGTGGAGCGTCACCG GGCGTTGCTGCGCCGGATTCTTGGCTGGGGGCTGAGCGTGGGCCTCGTCCTCAATGGCGGTGGGTTGCTGCTGTTCCGCC TGCGCAAAGCCGGCGTGCTGGAGTGGGACCCGAAGGGGCCCTGGATGATGATCGTCAACGGCTTCCAGGAGCCCGGCTAC ATCGCCATGGGCGCGGCATATGTGGCGGCCTTCGCGCTGCTCTTCCAGCGGGAGCGCTGGAGCCGCTGGCTGGGCGTGCT GACGCCCGTGGGGCGCATGGCCCTGACGAACTACCTGATGCAGTCCGCGGTGAGCATCTGGATTTATAGCGGTTGGGGCC TGGGCTTCATCGGCAAGCTGCCGGCGTCGCGCATCGTCGTCATCTGCTGCGTCATCTTCGCGGCGCAGGTGGTGTTCAGC CGTCTGTGGTTGGCGCGCTTCCGCTTCGGTCCCGCGGAGTGGCTGTGGCGCTCGCTCACGTATGGAAGGGTCCAGCCCAT GCGGCGGCTCGCTGGCGACGGAGGTGTCCCCGGCGTCAGCGCTTCTTGA
Upstream 100 bases:
>100_bases CAGCACACCCGCCATGCCAGGAGGGGGCAAGCCCGCATGTCCCGTCACCCTCGAACGTGCGGGATTGACGGCCAGGAGGC AGAGCGCGTCTGCTTCACAC
Downstream 100 bases:
>100_bases GCAGGTGAGGGCTCAGAGTGAGTTGAGGAACGCGAGCAGCGCCTGCCGGTCTGCGAGCGGCAGGCGCGTGTAGCGCTCCT GGGCCGGCGCGGCCTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSQSGSPVADDLPVARPVDASERVVLLDALRGFALWGVFVSNSLMWLSGRAFMPREAASALDAPLLEQVIGSIYQLFVTQ KFISIFSFLFGLGFALQFSRAESRGVSAAPLYRRRLLMLFGIGLAHALLLWTGDILHTYAMVGFLLMAFRARSNRTVLFW ALGLVTVMPFLVPAAIRYTPILLHGAEAAAEAAKASHARDMALRADTLVALSSESFWTAQVGNARFFLENLGGGFRRVLW MSLILGRFLLGLLAGRLLLLQDVERHRALLRRILGWGLSVGLVLNGGGLLLFRLRKAGVLEWDPKGPWMMIVNGFQEPGY IAMGAAYVAAFALLFQRERWSRWLGVLTPVGRMALTNYLMQSAVSIWIYSGWGLGFIGKLPASRIVVICCVIFAAQVVFS RLWLARFRFGPAEWLWRSLTYGRVQPMRRLAGDGGVPGVSAS
Sequences:
>Translated_442_residues MSQSGSPVADDLPVARPVDASERVVLLDALRGFALWGVFVSNSLMWLSGRAFMPREAASALDAPLLEQVIGSIYQLFVTQ KFISIFSFLFGLGFALQFSRAESRGVSAAPLYRRRLLMLFGIGLAHALLLWTGDILHTYAMVGFLLMAFRARSNRTVLFW ALGLVTVMPFLVPAAIRYTPILLHGAEAAAEAAKASHARDMALRADTLVALSSESFWTAQVGNARFFLENLGGGFRRVLW MSLILGRFLLGLLAGRLLLLQDVERHRALLRRILGWGLSVGLVLNGGGLLLFRLRKAGVLEWDPKGPWMMIVNGFQEPGY IAMGAAYVAAFALLFQRERWSRWLGVLTPVGRMALTNYLMQSAVSIWIYSGWGLGFIGKLPASRIVVICCVIFAAQVVFS RLWLARFRFGPAEWLWRSLTYGRVQPMRRLAGDGGVPGVSAS >Mature_441_residues SQSGSPVADDLPVARPVDASERVVLLDALRGFALWGVFVSNSLMWLSGRAFMPREAASALDAPLLEQVIGSIYQLFVTQK FISIFSFLFGLGFALQFSRAESRGVSAAPLYRRRLLMLFGIGLAHALLLWTGDILHTYAMVGFLLMAFRARSNRTVLFWA LGLVTVMPFLVPAAIRYTPILLHGAEAAAEAAKASHARDMALRADTLVALSSESFWTAQVGNARFFLENLGGGFRRVLWM SLILGRFLLGLLAGRLLLLQDVERHRALLRRILGWGLSVGLVLNGGGLLLFRLRKAGVLEWDPKGPWMMIVNGFQEPGYI AMGAAYVAAFALLFQRERWSRWLGVLTPVGRMALTNYLMQSAVSIWIYSGWGLGFIGKLPASRIVVICCVIFAAQVVFSR LWLARFRFGPAEWLWRSLTYGRVQPMRRLAGDGGVPGVSAS
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 48801; Mature: 48670
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSGSPVADDLPVARPVDASERVVLLDALRGFALWGVFVSNSLMWLSGRAFMPREAASA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHH LDAPLLEQVIGSIYQLFVTQKFISIFSFLFGLGFALQFSRAESRGVSAAPLYRRRLLMLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GIGLAHALLLWTGDILHTYAMVGFLLMAFRARSNRTVLFWALGLVTVMPFLVPAAIRYTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH ILLHGAEAAAEAAKASHARDMALRADTLVALSSESFWTAQVGNARFFLENLGGGFRRVLW HEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHHCCHHHHHHH MSLILGRFLLGLLAGRLLLLQDVERHRALLRRILGWGLSVGLVLNGGGLLLFRLRKAGVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEHHCCCE EWDPKGPWMMIVNGFQEPGYIAMGAAYVAAFALLFQRERWSRWLGVLTPVGRMALTNYLM EECCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAVSIWIYSGWGLGFIGKLPASRIVVICCVIFAAQVVFSRLWLARFRFGPAEWLWRSLT HHHHHEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YGRVQPMRRLAGDGGVPGVSAS HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SQSGSPVADDLPVARPVDASERVVLLDALRGFALWGVFVSNSLMWLSGRAFMPREAASA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHH LDAPLLEQVIGSIYQLFVTQKFISIFSFLFGLGFALQFSRAESRGVSAAPLYRRRLLMLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GIGLAHALLLWTGDILHTYAMVGFLLMAFRARSNRTVLFWALGLVTVMPFLVPAAIRYTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH ILLHGAEAAAEAAKASHARDMALRADTLVALSSESFWTAQVGNARFFLENLGGGFRRVLW HEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHHCCHHHHHHH MSLILGRFLLGLLAGRLLLLQDVERHRALLRRILGWGLSVGLVLNGGGLLLFRLRKAGVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEHHCCCE EWDPKGPWMMIVNGFQEPGYIAMGAAYVAAFALLFQRERWSRWLGVLTPVGRMALTNYLM EECCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAVSIWIYSGWGLGFIGKLPASRIVVICCVIFAAQVVFSRLWLARFRFGPAEWLWRSLT HHHHHEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH YGRVQPMRRLAGDGGVPGVSAS HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]