| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is lon
Identifier: 108763928
GI number: 108763928
Start: 2346497
End: 2348950
Strand: Direct
Name: lon
Synonym: MXAN_2017
Alternate gene names: 108763928
Gene position: 2346497-2348950 (Clockwise)
Preceding gene: 108760729
Following gene: 108762323
Centisome position: 25.67
GC content: 64.1
Gene sequence:
>2454_bases ATGTTCTTCGGACGTGACGACAAGAAGGAAGCCCAGAAGCGGGGTTTGACGGTCCCGCTCTTGCCCCTTCGGGACATCAT CGTGTTCCCGCACATGGTGGTGCCGTTGTTCGTCGGCCGGGAGAAGTCCATCGCGGCGTTGAAGGACGCGATGGCGCACA AGGGGCCGGACGACAAGGCCGTCATCCTGCTGGCCGCGCAGAAGAAGGCCAAGACGAACGACCCTACCCCCGACGACATC TTTCACTTCGGTACGCTGGGCCACGTCATCCAGCTCCTCCCGCTGCCCGACGGCACGGTGAAGGTGCTGGTGGAAGGCGT GCGCCGCGCCAAGGTGAAGAAGTTCCACCCCAACGACGCCTTCTTCATGGTCGAGGTGGAGGAGGTGGAGGAGCAGACGG AGAAGACGGTGGAGCTGGAGGCGCTCGTTCGCAGCGTCCACTCCGTCTTCGAGGCCTTCGTCAAGCTCAACAAGCGCATC CCGCCTGAGATGCTGATGCAGGTGGCCAGCATCGACGACCCGGCGCGGCTGGCCGACACCATCGTCGCGCACCTCTCCCT GAAGCTGAACGACAAGCAGGCCCTGCTCGAGACGGAGTCCCCGGCCAAGCGCCTGGAGAAGCTCTACGAGCTGATGCAGG GTGAGATCGAGATTCTCCAGGTGGAGAAGAAGATCCGCACGCGCGTCAAGAAGCAGATGGAGAAGACCCAGAAGGAGTAC TACCTGAATGAGCAGATGCAGGCCATTCAGAAGGAGCTGGGTGAGCGCGACGAGTTCAAGAACGAGATTCAGGAGATTGA AGAGAAGCTGAAGAACAAGCGGATGAGCAAGGAGGCCACGCTCAAGGTCAAGAAGGAGCTGAAGAAGCTCCGGATGATGA GCCCGATGAGCGCCGAGGCCACCGTCGTCCGCAACTACATCGACTGGATCATCAGCCTCCCCTGGTACGACGAGACGCAG GACCGTCTGGACGTCACTGAGGCGGAGACGGTGCTCAACGAGGACCACTACGGCTTGAAGAAGCCGAAGGAGCGCATCCT CGAGTACCTGGCCGTGCAGCAACTGGTGAAGAAGCTCAAGGGCCCCGTGCTGTGCTTCGTCGGTCCTCCGGGCGTCGGCA AGACGTCGCTGGCGCGCTCCATTGCTCGGGCCACCGGCCGCAAGTTCGTGCGCCTGTCGCTGGGCGGCGTTCGTGACGAG GCGGAGATTCGTGGCCACCGGCGCACGTACATCGGCGCGATGCCGGGCAAGCTCATCCAGTCGCTGAAGAAGGCGGGCAG CAACAACCCCGTCTTCCTGCTCGATGAAATCGACAAGATGTCCACGGACTTCCGTGGCGATCCGAGCGCGGCGCTGCTGG AGGTGCTGGACCCCGAGCAGAACCACACCTTCAACGACCACTACCTGGACCTCGACTACGACCTGTCCAAGGTGATGTTC ATCTGCACCGCGAACACGATGCACAACATCCCCGGTCCGCTGCAGGACCGCATGGAAGTGATTCGCATCGCGGGGTACAC GGAGCCGGAGAAGCTCTCCATCGCCCGCCGATACCTCATCCCGAAGGAGCAGGAGGCCAACGGGCTGTCGGACCTCAAGG TGGACATCTCCGACCCGGCGCTGCGGACCATCATCCACCGCTACACGCGGGAGTCGGGCGTGCGCTCGCTCGAGCGTGAG ATTGGCGGCGTGTTCCGCAAGATTGCCCGCGACGTGCTGAAGAACGGCAAGCGGGACATCGACGTGGACCGGAAGATGGC CATGAAGTTCCTGGGCACGCCCCGCTACCGTTACGGCATGGCGGAGGCCGAGGATCAGGTGGGCATCGTCACGGGCCTGG CGTGGACGGAGCTGGGCGGTGAAATCCTCACCACCGAGGCCACCATCATGCCGGGCAAGGGCAAGCTCATCATCACTGGC AAGCTGGGTGAGGTGATGCAGGAGTCCGCGCAGGCGGCCATGTCCTACGTGCGCAGCCGCGCCGAGCGCTTCGGCATCGA CCGCAAGGTGTTCGAGAACTACGACATCCACGTCCACTTGCCGGAGGGCGCGATTCCGAAGGACGGTCCGTCCGCCGGCG TCACCATCTGCACCGCACTGGTGAGCGCGCTCACCCGCGTGCTCATCCGCCGCGACGTGGCGATGACGGGTGAAATCACC CTGCGTGGGCGGGTGCTCCCCATTGGCGGCTTGAAGGAGAAGACGCTGGCCGCGCACCGGGCGGGCATCAAGACGGTCCT CATCCCGAAGGCGAACAAGAAGGACCTGAAGGACATCCCGCTGAAGATTCGCAAGCAGCTGCGCATCGTCCCGGTGGAGT TCGTGGACGACGTGCTGCGCGAGGCGCTGGTGCTGGAGAAGCCGGAGGAGTTCGGCCGCAAGCCGACGACGGACGGCGGC AAGCTGGGTGGCACCACGGAGCTGCCGGCCTCGCCGGCCGTGGCCCCGGCCTAG
Upstream 100 bases:
>100_bases GTTATAGAACTGCTGCATCCCGTACGAATGCTCGGCGAGCGAGCAGACGGGCAACTCTTCTAGGGGCCTGCAACTCCGAG GGCCCGCAGGTGGCGGATAC
Downstream 100 bases:
>100_bases CGGAGACAGACAGCACCCGGTGGGCCGCCGCGCCTGTCGGGCCGAGCTGAAGGGAAGCCAGGACGCCGGACGACCAAGGT CGCCGGGTTCCTGGCTTCTC
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La 1
Number of amino acids: Translated: 817; Mature: 817
Protein sequence:
>817_residues MFFGRDDKKEAQKRGLTVPLLPLRDIIVFPHMVVPLFVGREKSIAALKDAMAHKGPDDKAVILLAAQKKAKTNDPTPDDI FHFGTLGHVIQLLPLPDGTVKVLVEGVRRAKVKKFHPNDAFFMVEVEEVEEQTEKTVELEALVRSVHSVFEAFVKLNKRI PPEMLMQVASIDDPARLADTIVAHLSLKLNDKQALLETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQKEY YLNEQMQAIQKELGERDEFKNEIQEIEEKLKNKRMSKEATLKVKKELKKLRMMSPMSAEATVVRNYIDWIISLPWYDETQ DRLDVTEAETVLNEDHYGLKKPKERILEYLAVQQLVKKLKGPVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDE AEIRGHRRTYIGAMPGKLIQSLKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHTFNDHYLDLDYDLSKVMF ICTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSIARRYLIPKEQEANGLSDLKVDISDPALRTIIHRYTRESGVRSLERE IGGVFRKIARDVLKNGKRDIDVDRKMAMKFLGTPRYRYGMAEAEDQVGIVTGLAWTELGGEILTTEATIMPGKGKLIITG KLGEVMQESAQAAMSYVRSRAERFGIDRKVFENYDIHVHLPEGAIPKDGPSAGVTICTALVSALTRVLIRRDVAMTGEIT LRGRVLPIGGLKEKTLAAHRAGIKTVLIPKANKKDLKDIPLKIRKQLRIVPVEFVDDVLREALVLEKPEEFGRKPTTDGG KLGGTTELPASPAVAPA
Sequences:
>Translated_817_residues MFFGRDDKKEAQKRGLTVPLLPLRDIIVFPHMVVPLFVGREKSIAALKDAMAHKGPDDKAVILLAAQKKAKTNDPTPDDI FHFGTLGHVIQLLPLPDGTVKVLVEGVRRAKVKKFHPNDAFFMVEVEEVEEQTEKTVELEALVRSVHSVFEAFVKLNKRI PPEMLMQVASIDDPARLADTIVAHLSLKLNDKQALLETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQKEY YLNEQMQAIQKELGERDEFKNEIQEIEEKLKNKRMSKEATLKVKKELKKLRMMSPMSAEATVVRNYIDWIISLPWYDETQ DRLDVTEAETVLNEDHYGLKKPKERILEYLAVQQLVKKLKGPVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDE AEIRGHRRTYIGAMPGKLIQSLKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHTFNDHYLDLDYDLSKVMF ICTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSIARRYLIPKEQEANGLSDLKVDISDPALRTIIHRYTRESGVRSLERE IGGVFRKIARDVLKNGKRDIDVDRKMAMKFLGTPRYRYGMAEAEDQVGIVTGLAWTELGGEILTTEATIMPGKGKLIITG KLGEVMQESAQAAMSYVRSRAERFGIDRKVFENYDIHVHLPEGAIPKDGPSAGVTICTALVSALTRVLIRRDVAMTGEIT LRGRVLPIGGLKEKTLAAHRAGIKTVLIPKANKKDLKDIPLKIRKQLRIVPVEFVDDVLREALVLEKPEEFGRKPTTDGG KLGGTTELPASPAVAPA >Mature_817_residues MFFGRDDKKEAQKRGLTVPLLPLRDIIVFPHMVVPLFVGREKSIAALKDAMAHKGPDDKAVILLAAQKKAKTNDPTPDDI FHFGTLGHVIQLLPLPDGTVKVLVEGVRRAKVKKFHPNDAFFMVEVEEVEEQTEKTVELEALVRSVHSVFEAFVKLNKRI PPEMLMQVASIDDPARLADTIVAHLSLKLNDKQALLETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQKEY YLNEQMQAIQKELGERDEFKNEIQEIEEKLKNKRMSKEATLKVKKELKKLRMMSPMSAEATVVRNYIDWIISLPWYDETQ DRLDVTEAETVLNEDHYGLKKPKERILEYLAVQQLVKKLKGPVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDE AEIRGHRRTYIGAMPGKLIQSLKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHTFNDHYLDLDYDLSKVMF ICTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSIARRYLIPKEQEANGLSDLKVDISDPALRTIIHRYTRESGVRSLERE IGGVFRKIARDVLKNGKRDIDVDRKMAMKFLGTPRYRYGMAEAEDQVGIVTGLAWTELGGEILTTEATIMPGKGKLIITG KLGEVMQESAQAAMSYVRSRAERFGIDRKVFENYDIHVHLPEGAIPKDGPSAGVTICTALVSALTRVLIRRDVAMTGEIT LRGRVLPIGGLKEKTLAAHRAGIKTVLIPKANKKDLKDIPLKIRKQLRIVPVEFVDDVLREALVLEKPEEFGRKPTTDGG KLGGTTELPASPAVAPA
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain
Homologues:
Organism=Homo sapiens, GI31377667, Length=563, Percent_Identity=48.1349911190053, Blast_Score=549, Evalue=1e-156, Organism=Homo sapiens, GI21396489, Length=683, Percent_Identity=42.4597364568082, Blast_Score=541, Evalue=1e-153, Organism=Escherichia coli, GI1786643, Length=769, Percent_Identity=59.6879063719116, Blast_Score=919, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=701, Percent_Identity=39.5149786019972, Blast_Score=498, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17556486, Length=535, Percent_Identity=42.803738317757, Blast_Score=457, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6319449, Length=738, Percent_Identity=37.940379403794, Blast_Score=494, Evalue=1e-140, Organism=Drosophila melanogaster, GI221513036, Length=680, Percent_Identity=43.2352941176471, Blast_Score=531, Evalue=1e-151, Organism=Drosophila melanogaster, GI24666867, Length=680, Percent_Identity=43.2352941176471, Blast_Score=531, Evalue=1e-151,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): LON1_MYXXA (P36773)
Other databases:
- EMBL: D12923 - EMBL: AF127082 - PIR: A49844 - ProteinModelPortal: P36773 - MEROPS: S16.001 - BRENDA: 3.4.21.53 - GO: GO:0005737 - GO: GO:0006508 - InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 - PRINTS: PR00830 - SMART: SM00382 - SMART: SM00464 - TIGRFAMs: TIGR00763
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C; SSF88697 PUA-like; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =3.4.21.53
Molecular weight: Translated: 91816; Mature: 91816
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS01046 LON_SER
Important sites: ACT_SITE 691-691 ACT_SITE 734-734
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFGRDDKKEAQKRGLTVPLLPLRDIIVFPHMVVPLFVGREKSIAALKDAMAHKGPDDKA CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCE VILLAAQKKAKTNDPTPDDIFHFGTLGHVIQLLPLPDGTVKVLVEGVRRAKVKKFHPNDA EEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCC FFMVEVEEVEEQTEKTVELEALVRSVHSVFEAFVKLNKRIPPEMLMQVASIDDPARLADT EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH IVAHLSLKLNDKQALLETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQKEY HHHHHHEEECCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH YLNEQMQAIQKELGERDEFKNEIQEIEEKLKNKRMSKEATLKVKKELKKLRMMSPMSAEA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH TVVRNYIDWIISLPWYDETQDRLDVTEAETVLNEDHYGLKKPKERILEYLAVQQLVKKLK HHHHHHHHHHEECCCCCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC GPVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDEAEIRGHRRTYIGAMPGKLIQ CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCHHEECCCCHHHHH SLKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHTFNDHYLDLDYDLSKVMF HHHHCCCCCCEEEEECHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCHHHEEE ICTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSIARRYLIPKEQEANGLSDLKVDISDPA EEECCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCHH LRTIIHRYTRESGVRSLEREIGGVFRKIARDVLKNGKRDIDVDRKMAMKFLGTPRYRYGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHCCC AEAEDQVGIVTGLAWTELGGEILTTEATIMPGKGKLIITGKLGEVMQESAQAAMSYVRSR CCCCCCCEEEECHHHHHCCCEEEEECEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHH AERFGIDRKVFENYDIHVHLPEGAIPKDGPSAGVTICTALVSALTRVLIRRDVAMTGEIT HHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECEEE LRGRVLPIGGLKEKTLAAHRAGIKTVLIPKANKKDLKDIPLKIRKQLRIVPVEFVDDVLR EEEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCCHHHCCHHHHHHHEECCHHHHHHHHH EALVLEKPEEFGRKPTTDGGKLGGTTELPASPAVAPA HHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFFGRDDKKEAQKRGLTVPLLPLRDIIVFPHMVVPLFVGREKSIAALKDAMAHKGPDDKA CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCE VILLAAQKKAKTNDPTPDDIFHFGTLGHVIQLLPLPDGTVKVLVEGVRRAKVKKFHPNDA EEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCC FFMVEVEEVEEQTEKTVELEALVRSVHSVFEAFVKLNKRIPPEMLMQVASIDDPARLADT EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH IVAHLSLKLNDKQALLETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQKEY HHHHHHEEECCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH YLNEQMQAIQKELGERDEFKNEIQEIEEKLKNKRMSKEATLKVKKELKKLRMMSPMSAEA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH TVVRNYIDWIISLPWYDETQDRLDVTEAETVLNEDHYGLKKPKERILEYLAVQQLVKKLK HHHHHHHHHHEECCCCCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC GPVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDEAEIRGHRRTYIGAMPGKLIQ CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCHHEECCCCHHHHH SLKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHTFNDHYLDLDYDLSKVMF HHHHCCCCCCEEEEECHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCHHHEEE ICTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSIARRYLIPKEQEANGLSDLKVDISDPA EEECCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCHH LRTIIHRYTRESGVRSLEREIGGVFRKIARDVLKNGKRDIDVDRKMAMKFLGTPRYRYGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHCCC AEAEDQVGIVTGLAWTELGGEILTTEATIMPGKGKLIITGKLGEVMQESAQAAMSYVRSR CCCCCCCEEEECHHHHHCCCEEEEECEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHH AERFGIDRKVFENYDIHVHLPEGAIPKDGPSAGVTICTALVSALTRVLIRRDVAMTGEIT HHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECEEE LRGRVLPIGGLKEKTLAAHRAGIKTVLIPKANKKDLKDIPLKIRKQLRIVPVEFVDDVLR EEEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCCHHHCCHHHHHHHEECCHHHHHHHHH EALVLEKPEEFGRKPTTDGGKLGGTTELPASPAVAPA HHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468287