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The map label for this gene is ygiS [H]

Identifier: 108762323

GI number: 108762323

Start: 2349205

End: 2350785

Strand: Direct

Name: ygiS [H]

Synonym: MXAN_2018

Alternate gene names: 108762323

Gene position: 2349205-2350785 (Clockwise)

Preceding gene: 108763928

Following gene: 108758205

Centisome position: 25.7

GC content: 72.55

Gene sequence:

>1581_bases
ATGCCCACCACGCTGGATTGGAGCCACTCGGACCCGGACAGCTGGGCGAACTACCCGGTGATGCTGGCCACCCAGCGCGG
GCTCACGCAGTTGGGGCCGGACCACGGCGTGGAGCCGGGGCTGGCCGAGCGGTGGGAGCGCGTCACGGACGGGCAGGGGC
GGGATGTCTACACGTTCCACCTGCGGCGGGATGTTCGCTGGTCGAATGGGGCACCACTGGTGGCGCGTGACTTCGTCGTG
GGCTGGCGGCGCGCGCTGCAGGGCCGCGAGCGCGGGGAGATGGCGGACCTGGAGGGGGCCTCCGAGGCGCTGGCGCTCCA
GGAGCGAGGCGCGCCGGAGGCCGAGGTTCGCGCCGCGTTGGAGCGCGTGGGCGTGGAGGCTGTGGACGCGCACACGGTTC
GGGTGACGCTGGCTCGGCCGCGCAGCTACTTCCTGGCGCGCGTGGCCAATGTGTACCTGTTCTATCCGGCGCCCTCGGCG
GACCTCGAGGGGAAGTCGGATGAGGAGGTTCGGGACTACTTCGACCGTCCGCGCGATGGCCGCCCCCTGGCGCTGGGGCC
CTACCGCGTCGAGCGGTGGGACCGCGCGGGGGAGCGGGTGCGGCTGGTCCACAACCCGGCTTCGGCCTTTCCGCCGCGGA
TGGCAGAAGGGGAGACGCCCGTTCCGGTCATCACGCTGATGAAGTCGGAAATCGGTCCGGCGCTGTACGAGCGGGAGCGG
GTGGACTTCGTCTTCGTGGACAGCGCCGCGGCGCTGCGCATCCACCGGCCGGACGACTTGCGCCGCGAGCCGTTGCTGTC
CACGTACTTCCTGGCCTTCAACACGGAGAAGGCGCCGCTGGACAGGCCCGAGGTGCGGCGCGCGCTGTCCCGGGCGCTGG
ACCGCGAGGCGCTGCTGGCGGGACTGCTGCCCGCGGCGCGGCCGTCTCATGTGTTGCTTCCGCCGGAGCTGCCAGGGGCC
GCGACGCCGGAGCAGGCCGCGCGGCTGCCGCGCTATGCGCCGGAGCAGGCTCGGGCGGAGCTGGCGGGTGTCGAGCGGCC
GTTGCGGCTCGTCTACCGGTCGGGGGATGGATTCGTTCCCGAGGTGGCCATCGCGGAGCGGGTGGCCGCGCAGCTCGCGC
GCGTGGGGGTGCGGGTGGTGCTGGAGGCGCGCTCGGATTTCTCGGCGGAGATTGCCCGGCGCTCCGCGCAGGGGCCTCGC
ACGTATGACTTGTACCTGAGGCGCCTGGGGGCGGACTACGCGCACCCGAATACGTTCTTCACGCTGTTCGAGCGTGAGGG
CAACCACCAGACAGGGTGGGAGACGCAGGCGGGCGGCGAGCCCCTGGCGCGCTTCGAGCGGCTGCTGGAGGCGGGGGACA
GCGCGCCGGATGCGGCGACTGCGCAAGCGTCATATGTCCAGGCGCAGGAGGTGCTCGTGGGGGAACAGGCCGTGATTGCG
CCCCTGTACCACCCGGACCGTTATTACCGCGCGCGCTCGCGGCTTCGCGGGCTGGACGTGGACCCCTTCAACTTCCTGGC
GCTGCGCGCGCTTCGCTTGGGGGCGGCGTCGGATGCGCCTTGGGCGGGGGAGTCGCCGTGA

Upstream 100 bases:

>100_bases
TCGACTCCGGTGGTGGTGGTACCTGCTGGCCGTGTGGGCCGCGTCGTGTGGACCGTGCGGCTTCCAGCCGGAGCCCGGCG
TGAAGGTGGTGGTGCCGGCC

Downstream 100 bases:

>100_bases
GCGACAGCGGTATTCATGGCGGCTTTGGGCACATGCGTGCTTCGCGAGTGGCTCATGGCGTCGTTCTGCACTCAAGAGGC
GGGCCATGAGGGCCATCGCC

Product: putative oligopeptide ABC transporter periplasmic oligopeptide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MPTTLDWSHSDPDSWANYPVMLATQRGLTQLGPDHGVEPGLAERWERVTDGQGRDVYTFHLRRDVRWSNGAPLVARDFVV
GWRRALQGRERGEMADLEGASEALALQERGAPEAEVRAALERVGVEAVDAHTVRVTLARPRSYFLARVANVYLFYPAPSA
DLEGKSDEEVRDYFDRPRDGRPLALGPYRVERWDRAGERVRLVHNPASAFPPRMAEGETPVPVITLMKSEIGPALYERER
VDFVFVDSAAALRIHRPDDLRREPLLSTYFLAFNTEKAPLDRPEVRRALSRALDREALLAGLLPAARPSHVLLPPELPGA
ATPEQAARLPRYAPEQARAELAGVERPLRLVYRSGDGFVPEVAIAERVAAQLARVGVRVVLEARSDFSAEIARRSAQGPR
TYDLYLRRLGADYAHPNTFFTLFEREGNHQTGWETQAGGEPLARFERLLEAGDSAPDAATAQASYVQAQEVLVGEQAVIA
PLYHPDRYYRARSRLRGLDVDPFNFLALRALRLGAASDAPWAGESP

Sequences:

>Translated_526_residues
MPTTLDWSHSDPDSWANYPVMLATQRGLTQLGPDHGVEPGLAERWERVTDGQGRDVYTFHLRRDVRWSNGAPLVARDFVV
GWRRALQGRERGEMADLEGASEALALQERGAPEAEVRAALERVGVEAVDAHTVRVTLARPRSYFLARVANVYLFYPAPSA
DLEGKSDEEVRDYFDRPRDGRPLALGPYRVERWDRAGERVRLVHNPASAFPPRMAEGETPVPVITLMKSEIGPALYERER
VDFVFVDSAAALRIHRPDDLRREPLLSTYFLAFNTEKAPLDRPEVRRALSRALDREALLAGLLPAARPSHVLLPPELPGA
ATPEQAARLPRYAPEQARAELAGVERPLRLVYRSGDGFVPEVAIAERVAAQLARVGVRVVLEARSDFSAEIARRSAQGPR
TYDLYLRRLGADYAHPNTFFTLFEREGNHQTGWETQAGGEPLARFERLLEAGDSAPDAATAQASYVQAQEVLVGEQAVIA
PLYHPDRYYRARSRLRGLDVDPFNFLALRALRLGAASDAPWAGESP
>Mature_525_residues
PTTLDWSHSDPDSWANYPVMLATQRGLTQLGPDHGVEPGLAERWERVTDGQGRDVYTFHLRRDVRWSNGAPLVARDFVVG
WRRALQGRERGEMADLEGASEALALQERGAPEAEVRAALERVGVEAVDAHTVRVTLARPRSYFLARVANVYLFYPAPSAD
LEGKSDEEVRDYFDRPRDGRPLALGPYRVERWDRAGERVRLVHNPASAFPPRMAEGETPVPVITLMKSEIGPALYERERV
DFVFVDSAAALRIHRPDDLRREPLLSTYFLAFNTEKAPLDRPEVRRALSRALDREALLAGLLPAARPSHVLLPPELPGAA
TPEQAARLPRYAPEQARAELAGVERPLRLVYRSGDGFVPEVAIAERVAAQLARVGVRVVLEARSDFSAEIARRSAQGPRT
YDLYLRRLGADYAHPNTFFTLFEREGNHQTGWETQAGGEPLARFERLLEAGDSAPDAATAQASYVQAQEVLVGEQAVIAP
LYHPDRYYRARSRLRGLDVDPFNFLALRALRLGAASDAPWAGESP

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=483, Percent_Identity=28.3643892339545, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1787495, Length=473, Percent_Identity=26.0042283298097, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87081878, Length=502, Percent_Identity=24.9003984063745, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789966, Length=489, Percent_Identity=26.1758691206544, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787762, Length=483, Percent_Identity=23.1884057971014, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1787551, Length=483, Percent_Identity=27.3291925465839, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58595; Mature: 58463

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTLDWSHSDPDSWANYPVMLATQRGLTQLGPDHGVEPGLAERWERVTDGQGRDVYTFH
CCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEE
LRRDVRWSNGAPLVARDFVVGWRRALQGRERGEMADLEGASEALALQERGAPEAEVRAAL
EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
ERVGVEAVDAHTVRVTLARPRSYFLARVANVYLFYPAPSADLEGKSDEEVRDYFDRPRDG
HHCCCCEECCEEEEEEEECCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCC
RPLALGPYRVERWDRAGERVRLVHNPASAFPPRMAEGETPVPVITLMKSEIGPALYERER
CCEEECCHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHCC
VDFVFVDSAAALRIHRPDDLRREPLLSTYFLAFNTEKAPLDRPEVRRALSRALDREALLA
CCEEEECCCEEEEEECCCHHCCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
GLLPAARPSHVLLPPELPGAATPEQAARLPRYAPEQARAELAGVERPLRLVYRSGDGFVP
HHCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCHHHEEEEECCCCCCC
EVAIAERVAAQLARVGVRVVLEARSDFSAEIARRSAQGPRTYDLYLRRLGADYAHPNTFF
HHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEE
TLFEREGNHQTGWETQAGGEPLARFERLLEAGDSAPDAATAQASYVQAQEVLVGEQAVIA
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
PLYHPDRYYRARSRLRGLDVDPFNFLALRALRLGAASDAPWAGESP
ECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PTTLDWSHSDPDSWANYPVMLATQRGLTQLGPDHGVEPGLAERWERVTDGQGRDVYTFH
CCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEE
LRRDVRWSNGAPLVARDFVVGWRRALQGRERGEMADLEGASEALALQERGAPEAEVRAAL
EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
ERVGVEAVDAHTVRVTLARPRSYFLARVANVYLFYPAPSADLEGKSDEEVRDYFDRPRDG
HHCCCCEECCEEEEEEEECCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCC
RPLALGPYRVERWDRAGERVRLVHNPASAFPPRMAEGETPVPVITLMKSEIGPALYERER
CCEEECCHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHCC
VDFVFVDSAAALRIHRPDDLRREPLLSTYFLAFNTEKAPLDRPEVRRALSRALDREALLA
CCEEEECCCEEEEEECCCHHCCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
GLLPAARPSHVLLPPELPGAATPEQAARLPRYAPEQARAELAGVERPLRLVYRSGDGFVP
HHCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCHHHEEEEECCCCCCC
EVAIAERVAAQLARVGVRVVLEARSDFSAEIARRSAQGPRTYDLYLRRLGADYAHPNTFF
HHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEE
TLFEREGNHQTGWETQAGGEPLARFERLLEAGDSAPDAATAQASYVQAQEVLVGEQAVIA
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
PLYHPDRYYRARSRLRGLDVDPFNFLALRALRLGAASDAPWAGESP
ECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]