| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pepP [H]
Identifier: 108763789
GI number: 108763789
Start: 2355844
End: 2357394
Strand: Reverse
Name: pepP [H]
Synonym: MXAN_2026
Alternate gene names: 108763789
Gene position: 2357394-2355844 (Counterclockwise)
Preceding gene: 108757437
Following gene: 108760653
Centisome position: 25.79
GC content: 68.6
Gene sequence:
>1551_bases TTGTCCATGGCCACGACCCGTTCTTCCGCCGCCGCTCAGCCCGCCCTGGGCGAGCAACAGCCGATTGTCACCTCCGAGGA GCAGGCCCCCGCGGCAGCGCCCGCGAAGCCCGCCACGCACGACACGGTGCCACCGCCGGCCCTGCTCGACTTCATGATGA AGTCGTGGAAGCCGCGCTCGAAGAAGCTGCCCCCGAAAATCAAGCAGGCGGAGGCCTTCAAAGCCCGCCGCCGGGCGCTC TCCAAGCTGTTCCCCGGCGAGACGCTCATCATTCCCACCGGCCACGAGAAGGTGCGCGCCAACGACACCAACTTCCGTTT CCGGCCGGGCAGCGACTTCTACTACCTCACCGGCAACCTGGAGCCGGACTGCGTCCTCGTCCTCCAGCCCAAGGAGAAGG GTGGCCACACCGACGTGCTCTTCGTGGAGCCGAACCCGGGCCGCACCGACGCCACGTTCTTCACCGACCGCGTGAAGGGG GAGCTGTGGGAAGGCCCCCGCCTGGGCGTGAAGGAGAGTCAGGCCCGCTACGGCGTGGACCAGGCCCGGAGCCTCAACGA GCTGCCGGCCTTCCTCTCCGGCCTCAGCGGCGCGGAGAGCCGTCCCACGCGCTTGCTGCGCGGCCTGTCGCCCAAGGTGG ACGGCGCCGTCCCGGCGCCGGGTGAGAAGGACAAGGGGCTGGCCCAAGCGCTGTCGGAGATGCGGCTGCTCAAGGACGCG CAGGAGCTGCGTGAACTCCAGACGTCCATCGACTCCACGCACCGCGGCTTCGAGGACGTCATCCGTGGCCTGAAGACGGC GAAGACGGAGCGCTACGTGGAGGGCATCTTCAACCTCCGCGCCCGCGTGGAAGGCAACGACGTGGGCTACCGCACCATCG CCGCCTCCGGCGCCCATGCGTGCATCCTGCACTGGCACCACAATGACGGGCCGCTCGTTCCCGGCGACCTGCTGCTGCTG GACGCGGGCGTGGAGGGCCAGACGCTCTACACCGCGGACATCACCCGCACCCTGCCCATCTCCGGGAAGTTCTCCAAGGA GCAGCGCGAAATCTACGAGCTGGTGCTGGAGGCGCAGGACGCGGCCTTCGCCGAGGTGAAGCCGGGCAACGACTTCATGG AGCCCAACCGCGCGGCCATGCGCGTGCTCGCGGAGGGCCTGGAGGCCCTGGGCATCCTCGAGGACGCCGAGGAGGCGCTC AAGGACGAGCACCAGTTCTACAAGCGCTACTCGCTCCACAACGTCAGCCACATGCTGGGCCTGGACGTGCACGACTGCGC CCAGGCGCGGCAGGAGACCTACAAGTACGGGAAGCTCCAGGCCGGCATGGTGCTGACGGTGGAGCCTGGCCTCTACTTCC AGATGGACGACCTCACCGTGCCCAAGCGCTACCGGGGCATCGGCGTGCGCATCGAGGACGACGTCGTCGTCACCGCGCGC GGCTGCAAGGTCCTCTCCGCCGACATCCCCCGCAAGGCGAAGGATGTGGAGGCGTGGATGAAGTCCCTCTGGGCGGCGGA CAAGGCCGCCCGGAAGGGCAAGAAGAAGTAG
Upstream 100 bases:
>100_bases GTGCCCGCCCTCCTGGGGCAGGTGGCGCTTCTTCGGGAGGACATTGCGGCACCGCCCGCGACAACTCTGACTTGAAGGCG CGCCGTGGTCGGGTGAAGAG
Downstream 100 bases:
>100_bases GCCCGGCGCGCTACTTCGGCTTCGGCGCGGCGGTGGCGGGTTTCGCCGCCGCGGCCGCGGCCCGCTCCTGCCACTCCGAC AGCGCCAGAGGCTTCACGTC
Product: Xaa-Pro aminopeptidase
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase I; Aminopeptidase P I; APP; PEPP I; X-Pro aminopeptidase I; Xaa-Pro aminopeptidase I [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSMATTRSSAAAQPALGEQQPIVTSEEQAPAAAPAKPATHDTVPPPALLDFMMKSWKPRSKKLPPKIKQAEAFKARRRAL SKLFPGETLIIPTGHEKVRANDTNFRFRPGSDFYYLTGNLEPDCVLVLQPKEKGGHTDVLFVEPNPGRTDATFFTDRVKG ELWEGPRLGVKESQARYGVDQARSLNELPAFLSGLSGAESRPTRLLRGLSPKVDGAVPAPGEKDKGLAQALSEMRLLKDA QELRELQTSIDSTHRGFEDVIRGLKTAKTERYVEGIFNLRARVEGNDVGYRTIAASGAHACILHWHHNDGPLVPGDLLLL DAGVEGQTLYTADITRTLPISGKFSKEQREIYELVLEAQDAAFAEVKPGNDFMEPNRAAMRVLAEGLEALGILEDAEEAL KDEHQFYKRYSLHNVSHMLGLDVHDCAQARQETYKYGKLQAGMVLTVEPGLYFQMDDLTVPKRYRGIGVRIEDDVVVTAR GCKVLSADIPRKAKDVEAWMKSLWAADKAARKGKKK
Sequences:
>Translated_516_residues MSMATTRSSAAAQPALGEQQPIVTSEEQAPAAAPAKPATHDTVPPPALLDFMMKSWKPRSKKLPPKIKQAEAFKARRRAL SKLFPGETLIIPTGHEKVRANDTNFRFRPGSDFYYLTGNLEPDCVLVLQPKEKGGHTDVLFVEPNPGRTDATFFTDRVKG ELWEGPRLGVKESQARYGVDQARSLNELPAFLSGLSGAESRPTRLLRGLSPKVDGAVPAPGEKDKGLAQALSEMRLLKDA QELRELQTSIDSTHRGFEDVIRGLKTAKTERYVEGIFNLRARVEGNDVGYRTIAASGAHACILHWHHNDGPLVPGDLLLL DAGVEGQTLYTADITRTLPISGKFSKEQREIYELVLEAQDAAFAEVKPGNDFMEPNRAAMRVLAEGLEALGILEDAEEAL KDEHQFYKRYSLHNVSHMLGLDVHDCAQARQETYKYGKLQAGMVLTVEPGLYFQMDDLTVPKRYRGIGVRIEDDVVVTAR GCKVLSADIPRKAKDVEAWMKSLWAADKAARKGKKK >Mature_515_residues SMATTRSSAAAQPALGEQQPIVTSEEQAPAAAPAKPATHDTVPPPALLDFMMKSWKPRSKKLPPKIKQAEAFKARRRALS KLFPGETLIIPTGHEKVRANDTNFRFRPGSDFYYLTGNLEPDCVLVLQPKEKGGHTDVLFVEPNPGRTDATFFTDRVKGE LWEGPRLGVKESQARYGVDQARSLNELPAFLSGLSGAESRPTRLLRGLSPKVDGAVPAPGEKDKGLAQALSEMRLLKDAQ ELRELQTSIDSTHRGFEDVIRGLKTAKTERYVEGIFNLRARVEGNDVGYRTIAASGAHACILHWHHNDGPLVPGDLLLLD AGVEGQTLYTADITRTLPISGKFSKEQREIYELVLEAQDAAFAEVKPGNDFMEPNRAAMRVLAEGLEALGILEDAEEALK DEHQFYKRYSLHNVSHMLGLDVHDCAQARQETYKYGKLQAGMVLTVEPGLYFQMDDLTVPKRYRGIGVRIEDDVVVTARG CKVLSADIPRKAKDVEAWMKSLWAADKAARKGKKK
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=462, Percent_Identity=31.6017316017316, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI149589008, Length=473, Percent_Identity=28.5412262156448, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI260593665, Length=313, Percent_Identity=31.9488817891374, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI260593663, Length=461, Percent_Identity=27.9826464208243, Blast_Score=132, Evalue=7e-31, Organism=Escherichia coli, GI1789275, Length=454, Percent_Identity=34.8017621145374, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1788728, Length=259, Percent_Identity=30.8880308880309, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1790282, Length=300, Percent_Identity=29.3333333333333, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17508215, Length=467, Percent_Identity=26.338329764454, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71989583, Length=288, Percent_Identity=27.4305555555556, Blast_Score=110, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320922, Length=467, Percent_Identity=27.8372591006424, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321118, Length=480, Percent_Identity=28.125, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI19920384, Length=424, Percent_Identity=31.6037735849057, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI21357079, Length=481, Percent_Identity=29.9376299376299, Blast_Score=160, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 57018; Mature: 56886
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMATTRSSAAAQPALGEQQPIVTSEEQAPAAAPAKPATHDTVPPPALLDFMMKSWKPRS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC KKLPPKIKQAEAFKARRRALSKLFPGETLIIPTGHEKVRANDTNFRFRPGSDFYYLTGNL CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCEEECCCCCEEEEECCC EPDCVLVLQPKEKGGHTDVLFVEPNPGRTDATFFTDRVKGELWEGPRLGVKESQARYGVD CCCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCHH QARSLNELPAFLSGLSGAESRPTRLLRGLSPKVDGAVPAPGEKDKGLAQALSEMRLLKDA HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QELRELQTSIDSTHRGFEDVIRGLKTAKTERYVEGIFNLRARVEGNDVGYRTIAASGAHA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCE CILHWHHNDGPLVPGDLLLLDAGVEGQTLYTADITRTLPISGKFSKEQREIYELVLEAQD EEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHCC AAFAEVKPGNDFMEPNRAAMRVLAEGLEALGILEDAEEALKDEHQFYKRYSLHNVSHMLG CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDVHDCAQARQETYKYGKLQAGMVLTVEPGLYFQMDDLTVPKRYRGIGVRIEDDVVVTAR CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCHHHCCCCEEEECCEEEEEC GCKVLSADIPRKAKDVEAWMKSLWAADKAARKGKKK CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SMATTRSSAAAQPALGEQQPIVTSEEQAPAAAPAKPATHDTVPPPALLDFMMKSWKPRS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC KKLPPKIKQAEAFKARRRALSKLFPGETLIIPTGHEKVRANDTNFRFRPGSDFYYLTGNL CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCEEECCCCCEEEEECCC EPDCVLVLQPKEKGGHTDVLFVEPNPGRTDATFFTDRVKGELWEGPRLGVKESQARYGVD CCCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCHH QARSLNELPAFLSGLSGAESRPTRLLRGLSPKVDGAVPAPGEKDKGLAQALSEMRLLKDA HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QELRELQTSIDSTHRGFEDVIRGLKTAKTERYVEGIFNLRARVEGNDVGYRTIAASGAHA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCE CILHWHHNDGPLVPGDLLLLDAGVEGQTLYTADITRTLPISGKFSKEQREIYELVLEAQD EEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHCC AAFAEVKPGNDFMEPNRAAMRVLAEGLEALGILEDAEEALKDEHQFYKRYSLHNVSHMLG CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDVHDCAQARQETYKYGKLQAGMVLTVEPGLYFQMDDLTVPKRYRGIGVRIEDDVVVTAR CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCHHHCCCCEEEECCEEEEEC GCKVLSADIPRKAKDVEAWMKSLWAADKAARKGKKK CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]