Click here to switch to the map view.

The map label for this gene is carS

Identifier: 108763561

GI number: 108763561

Start: 5036174

End: 5036509

Strand: Direct

Name: carS

Synonym: MXAN_4090

Alternate gene names: 108763561

Gene position: 5036174-5036509 (Clockwise)

Preceding gene: 108759900

Following gene: 108763809

Centisome position: 55.1

GC content: 67.86

Gene sequence:

>336_bases
ATGATCCAGGACCCCTCACTCATCATCTGCCATGACGTGGACGGCGCACCGGTGCGCATTGGCGCGAAGGTGAAGGTCGT
TCCGCACTCCGAGGACGGCACCATCAGCCAGCGCTTCCTGGGCCAGACGGGAATCGTCGTGGGGCTGGTGTTCGACGACC
CGGCCACGCAGTACCCCGATGACCCGCTCATCCAGGTGCTCGTCGAAGGGCTGGGCGAAGACCTCTTCTTCCCGGAGGAG
CTGGAGCTGGCCCCGGAGTGGGCCCGCAACCGGATTGCCCAGCACCGTCAGGCCGTGCGGACCGGCGGCCGGAGTTCGCT
GGAGCGCCTGCCCTGA

Upstream 100 bases:

>100_bases
ACTGGCGGCACGTCCTCTCCCACCACCTGCTCGCATGGGTCGTCATCACCGTCGTACTGGTGGTCATCTCGAAGTCGCTC
AAACCCCGTTCCTACGCGCC

Downstream 100 bases:

>100_bases
CGTGGCGGGCCCCGCGTCAGCGCGTACCCGACTGCGCTCGCGCGAACGCCACCGCCTGAGAAATCGCCTTGGAGCTGGGA
AAGAGGCTCCGCGCCCGTTC

Product: carotenogenesis protein carS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MIQDPSLIICHDVDGAPVRIGAKVKVVPHSEDGTISQRFLGQTGIVVGLVFDDPATQYPDDPLIQVLVEGLGEDLFFPEE
LELAPEWARNRIAQHRQAVRTGGRSSLERLP

Sequences:

>Translated_111_residues
MIQDPSLIICHDVDGAPVRIGAKVKVVPHSEDGTISQRFLGQTGIVVGLVFDDPATQYPDDPLIQVLVEGLGEDLFFPEE
LELAPEWARNRIAQHRQAVRTGGRSSLERLP
>Mature_111_residues
MIQDPSLIICHDVDGAPVRIGAKVKVVPHSEDGTISQRFLGQTGIVVGLVFDDPATQYPDDPLIQVLVEGLGEDLFFPEE
LELAPEWARNRIAQHRQAVRTGGRSSLERLP

Specific function: Trans-acting activator of the carotenoid synthesis regulon, probably by activating the carB locus

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CARS_MYXXA (Q06911)

Other databases:

- EMBL:   X71062
- PIR:   S39879
- PDB:   2KSS
- PDBsum:   2KSS
- GO:   GO:0006350

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12210; Mature: 12210

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQDPSLIICHDVDGAPVRIGAKVKVVPHSEDGTISQRFLGQTGIVVGLVFDDPATQYPD
CCCCCCEEEEECCCCCCEEECCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCCCC
DPLIQVLVEGLGEDLFFPEELELAPEWARNRIAQHRQAVRTGGRSSLERLP
CHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MIQDPSLIICHDVDGAPVRIGAKVKVVPHSEDGTISQRFLGQTGIVVGLVFDDPATQYPD
CCCCCCEEEEECCCCCCEEECCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCCCC
DPLIQVLVEGLGEDLFFPEELELAPEWARNRIAQHRQAVRTGGRSSLERLP
CHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934835